Subtree rooted at node 96:

                                                                    /----- Gh_A11G2870 [Gossypium hirsutum]                    (2)
                                                               /-100+                 
                                                               |    \----- Cotton_A_05503_BGI-A2_v1.0 [Gossypium arboreum]     (24)
                                                          /-100+                      
                                                          |    |    /----- Gorai.007G371300.1 [Gossypium raimondii]            (19)
                                                          |    \-100+                 
                                                    /--77-+         \----- Gh_D11G3254 [Gossypium hirsutum]                    (67)
                                                    |     |                           
                                                    |     \--------------- Thecc1EG022428t1 [Theobroma cacao]                  (6)
                                               /-100+                                 
                                               |    |               /----- Cotton_A_00517_BGI-A2_v1.0 [Gossypium arboreum]     (13)
                                               |    \------100------+                 
           /-----------------92----------------+                    \----- Gh_D01G2032 [Gossypium hirsutum]                    (14)
           |                                   |                                      
           |                                   |                    /----- orange1.1g044541m [Citrus sinensis]                 (33)
           |                                   \---------100--------+                 
           |                                                        \----- Ciclev10012182m [Citrus clementina]                 (61)
           |                                                                          
           |                                        /--------------------- 676717992 [Sisymbrium irio]                         (3)
           |                                        |                                 
           |                                        |               /----- Rsa1.0_00180.1_g00022.1 [Raphanus sativus]          (7)
           |                                   /-100+     /---100---+                 
           |                                   |    |     |         \----- RrC2341_p1 [Raphanus raphanistrum]                  (37)
           |                                   |    |     |                           
           |                                   |    \-100-+         /----- GSBRNA2T00136435001 [Brassica napus]                (11)
           |                                   |          |    /-100+                 
           |                                   |          |    |    \----- XP_009122675.1 [Brassica rapa]                      (52)
           |                              /-63-+          \-100+                      
           |                              |    |               |    /----- GSBRNA2T00032259001 [Brassica napus]                (12)
           |                              |    |               \-100+                 
           |                              |    |                    \----- XP_013606836.1 [Brassica oleracea]                  (32)
           |                         /-100+    |                                      
           |                         |    |    \-------------------------- Tp6g38980 [Thellungiella parvula]                   (15)
           |                         |    |                                           
           |                         |    \------------------------------- Thhalv10014245m [Eutrema salsugineum]               (50)
           |                         |                                                
      --100+                         |                              /----- Csa20g003880.1 [Camelina sativa]                    (9)
           |                    /-51-+                         /-100+                 
           |                    |    |                         |    \----- Csa13g003800.1 [Camelina sativa]                    (34)
           |                    |    |              /----72----+                      
           |                    |    |              |          \---------- Bostr.28714s0001.1.p [Boechera stricta]             (44)
           |                    |    |              |                                 
           |                    |    |              |               /----- Carubv10001577m [Capsella rubella]                  (20)
           |                    |    \------100-----+     /---100---+                 
           |                    |                   |     |         \----- Cagra.0154s0029.1.p [Capsella grandiflora]          (45)
           |                    |                   |     |                           
           |                    |                   |     |         /----- 860911 [Arabidopsis lyrata]                         (46)
           |               /-99-+                   \--86-+    /-100+                 
           |               |    |                         |    |    \----- Araha.9547s0002.1.p [Arabidopsis halleri]           (47)
           |               |    |                         |    |                      
           |               |    |                         |    |    /----- Araha.8947s0002.1.p [Arabidopsis halleri]           (49)
           |               |    |                         \-100+-100+                 
           |               |    |                              |    \----- 349656 [Arabidopsis lyrata]                         (56)
           |         /-100-+    |                              |                      
           |         |     |    |                              \---------- AT5G03740.1 [Arabidopsis thaliana]                  (53)
           |         |     |    |                                                     
           |         |     |    \----------------------------------------- KFK24844.1 [Arabis alpina]                          (30)
           |    /-100+     |                                                          
           |    |    |     \---------------------------------------------- AA19G00215 [Aethionema arabicum]                    (51)
           |    |    |                                                                
           \-100+    \---------------------------------------------------- XP_010543469.1 [Tarenaya hassleriana]               (16)
                |                                                                     
                \--------------------------------------------------------- evm.model.supercontig_5.85 [Carica papaya]          (31)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- 676766788 [Sisymbrium irio]                         (1)
      |                                                                               
      |                                        /-------------------------- (96)
      |                                        |                                      
      |                                        |               /---------- Gh_D09G0901 [Gossypium hirsutum]                    (10)
      |                                        |               |                      
      |                                        |               |    /----- Gh_A09G0878 [Gossypium hirsutum]                    (17)
      |                                        |          /-100+-100+                 
      |                                        |          |    |    \----- Cotton_A_38986_BGI-A2_v1.0 [Gossypium arboreum]     (62)
      |                                   /-86-+          |    |                      
      |                                   |    |    /-100-+    \---------- Gorai.006G109300.1 [Gossypium raimondii]            (65)
      |                                   |    |    |     |                           
      |                                   |    |    |     \--------------- Thecc1EG041517t3 [Theobroma cacao]                  (66)
      |                                   |    |    |                                 
      |                                   |    |    |               /----- Cotton_A_13908_BGI-A2_v1.0 [Gossypium arboreum]     (22)
      |                                   |    \-100+          /-100+                 
      |                                   |         |          |    \----- Gh_A05G0702 [Gossypium hirsutum]                    (35)
      |                              /-100+         |     /-100+                      
      |                              |    |         |     |    \---------- Gh_D05G0849 [Gossypium hirsutum]                    (63)
      |                              |    |         \-100-+                           
      |                              |    |               \--------------- Gorai.009G088600.1 [Gossypium raimondii]            (60)
      |                              |    |                                           
      |                              |    |               /--------------- evm.model.supercontig_47.60 [Carica papaya]         (8)
      |                              |    |               |                           
      |                              |    |               |         /----- Neem_10641_f_2 [Azadirachta indica]                 (21)
      |                         /-100+    \-------64------+    /-100+                 
      |                         |    |                    |    |    \----- Neem_23419_f_1 [Azadirachta indica]                 (57)
      |                         |    |                    \-100+                      
      |                         |    |                         |    /----- Ciclev10028932m [Citrus clementina]                 (41)
      |                         |    |                         \-100+                 
      |                         |    |                              \----- orange1.1g022395m [Citrus sinensis]                 (42)
      |                         |    |                                                
      |                         |    |                              /----- XP_010535665.1 [Tarenaya hassleriana]               (5)
      |                         |    \--------------100-------------+                 
      |                         |                                   \----- XP_010520407.1 [Tarenaya hassleriana]               (38)
      +                         |                                                     
      |                         |                                   /----- Csa04g024450.1 [Camelina sativa]                    (4)
      |                    /-99-+                              /-56-+                 
      |                    |    |                              |    \----- Csa09g035690.1 [Camelina sativa]                    (39)
      |                    |    |                         /-100+                      
      |                    |    |                         |    \---------- Csa06g017320.1 [Camelina sativa]                    (36)
      |                    |    |                   /-100-+                           
      |                    |    |                   |     |         /----- Carubv10017869m [Capsella rubella]                  (18)
      |                    |    |                   |     \---100---+                 
      |                    |    |                   |               \----- Cagra.9571s0003.1.p [Capsella grandiflora]          (54)
      |                    |    |              /-86-+                                 
      |              /--99-+    |              |    |               /----- AT3G44750.1 [Arabidopsis thaliana]                  (28)
      |              |     |    |              |    |          /-94-+                 
      |              |     |    |              |    |          |    \----- 484880 [Arabidopsis lyrata]                         (29)
      |              |     |    \------100-----+    \----100---+                      
      |              |     |                   |               \---------- Araha.29337s0002.1.p [Arabidopsis halleri]          (55)
      |         /-99-+     |                   |                                      
      |         |    |     |                   \-------------------------- Bostr.0556s0764.1.p [Boechera stricta]              (58)
      |         |    |     |                                                          
      |         |    |     \---------------------------------------------- KFK33910.1 [Arabis alpina]                          (23)
      |    /-99-+    |                                                                
      |    |    |    \---------------------------------------------------- Thhalv10002782m [Eutrema salsugineum]               (27)
      |    |    |                                                                     
      |    |    \--------------------------------------------------------- Tp5g16430 [Thellungiella parvula]                   (48)
      |-99-+                                                                          
      |    |                                                        /----- XP_013583952.1 [Brassica oleracea]                  (25)
      |    |                                                   /-100+                 
      |    |                                                   |    \----- GSBRNA2T00012327001 [Brassica napus]                (59)
      |    \------------------------100------------------------+                      
      |                                                        |    /----- Rsa1.0_05782.1_g00001.1 [Raphanus sativus]          (40)
      |                                                        \-100+                 
      |                                                             \----- RrC17195_p1 [Raphanus raphanistrum]                 (43)
      |                                                                               
      |                                                             /----- 676734256 [Sisymbrium irio]                         (26)
      \------------------------------83-----------------------------+                 
                                                                    \----- 676718330 [Sisymbrium irio]                         (64)