![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM2028
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 114:
/----- Cagra.7309s0002.1.p [Capsella grandiflora] (6)
/---100---+
| \----- Carubv10018774m [Capsella rubella] (15)
|
/------100------+ /----- 905786 [Arabidopsis lyrata] (51)
| | /-100+
| | | \----- Araha.3367s0002.1.p [Arabidopsis halleri] (53)
| \-100+
| \---------- AT3G46070.1 [Arabidopsis thaliana] (67)
|
| /----- Csa06g019820.1 [Camelina sativa] (20)
| /-99-+
| | \----- Csa04g028800.1 [Camelina sativa] (54)
| /-100+
| | \---------- Csa09g041170.1 [Camelina sativa] (30)
/------97------+ /-100-+
| | | | /----- Carubv10018142m [Capsella rubella] (66)
| | | \---100---+
| | | \----- Cagra.7309s0001.1.p [Capsella grandiflora] (72)
| | |
| | | /---------- AT3G46090.1 [Arabidopsis thaliana] (50)
| | /-95-+ |
| | | |----50----+ /----- AT3G46080.1 [Arabidopsis thaliana] (55)
| | | | \-55-+
| | | | \----- 484989 [Arabidopsis lyrata] (59)
| \-100+ |
| | \--------------------- Araha.3367s0001.1.p [Arabidopsis halleri] (60)
| |
| \-------------------------- Bostr.18473s0333.1.p [Boechera stricta] (24)
|
| /----- 676725526 [Sisymbrium irio] (8)
| /---------91---------+
| | \----- 676725528 [Sisymbrium irio] (58)
| |
| | /----- XP_013627620.1 [Brassica oleracea] (14)
| | /-100+
| | | \----- GSBRNA2T00143999001 [Brassica napus] (75)
| | /-100+
| /-86-+ | | /----- GSBRNA2T00107287001 [Brassica napus] (38)
| | | | \-100+
/--97-+ | | /-100-+ \----- XP_009149989.1 [Brassica rapa] (52)
| | | | | |
| | | | | | /----- RrC8129_p2 [Raphanus raphanistrum] (22)
| | | | | \---100---+
| | | | | \----- Rsa1.0_01743.1_g00006.1 [Raphanus sativus] (64)
| | | \-99-+
| | /-100+ | /----- XP_009150252.1 [Brassica rapa] (16)
| | | | | /-100+
| | | | | | \----- GSBRNA2T00046472001 [Brassica napus] (56)
| | | | \----100---+
| | | | | /----- RrC2893_p3 [Raphanus raphanistrum] (23)
| | | | \-100+
| | | | \----- Rsa1.0_00651.1_g00005.1 [Raphanus sativus] (33)
| | | |
| | | \------------------------------- Tp5g15540 [Thellungiella parvula] (62)
| | |
| | | /----- GSBRNA2T00046471001 [Brassica napus] (17)
| | /-100+ /-100+
/-100+ | | | | \----- XP_009150251.1 [Brassica rapa] (49)
| | | | |-----------100-----------+
| | | | | | /----- RrC2893_p2 [Raphanus raphanistrum] (36)
| | | | | \-100+
| | | | | \----- Rsa1.0_00651.1_g00004.1 [Raphanus sativus] (45)
| | | | |
| | | | |------------------------------------ Tp5g15530 [Thellungiella parvula] (25)
| | \-100+ |
| | | | /---------- 676725512 [Sisymbrium irio] (29)
| | | | |
/-100+ | | \-----------100-----------+ /----- GSBRNA2T00125685001 [Brassica napus] (41)
| | | | \-100+
| | | | \----- XP_013591437.1 [Brassica oleracea] (44)
| | | |
| | | | /----- Thhalv10002839m [Eutrema salsugineum] (12)
| | | \-----------------87----------------+
| | | \----- Thhalv10002947m [Eutrema salsugineum] (18)
| | |
--100+ | \---------------------------------------------------- KFK33964.1 [Arabis alpina] (73)
| |
| \--------------------------------------------------------- AA16G00069 [Aethionema arabicum] (61)
|
| /----- XP_010541384.1 [Tarenaya hassleriana] (9)
| /-88-+
| | \----- XP_010536246.1 [Tarenaya hassleriana] (70)
\------------------------100------------------------+
\---------- XP_010520301.1 [Tarenaya hassleriana] (42)
Root part of tree:
/------------------------------------------------------------------- AT5G59820.1 [Arabidopsis thaliana] (1)
|
|------------------------------------------------------------------- 919218 [Arabidopsis lyrata] (7)
|
|------------------------------------------------------------------- Araha.2561s0008.1.p [Arabidopsis halleri] (31)
|
| /--------------- Csa18g033110.1 [Camelina sativa] (2)
| |
| | /------- (114)
| /--99--+--100--+
| | | \------- AA97G00032 [Aethionema arabicum] (32)
| | |
| | \--------------- KFK27524.1 [Arabis alpina] (21)
| |
| |---------------------- Csa11g093680.1 [Camelina sativa] (3)
| /------------------93-----------------+
| | | /------- Carubv10027055m [Capsella rubella] (19)
| | |------100-----+
+ | | \------- Cagra.1317s0034.1.p [Capsella grandiflora] (34)
| | |
| | \---------------------- Csa02g065560.1 [Camelina sativa] (46)
| |
| | /---------------------- XP_013619843.1 [Brassica oleracea] (4)
| | |
| | | /------- RrC2002_p4 [Raphanus raphanistrum] (10)
| | | /---97--+
| | /---62--+ | \------- Rsa1.0_01835.1_g00001.1 [Raphanus sativus] (71)
| | | |--63--+
| | | | \--------------- Rsa1.0_01835.1_g00003.1 [Raphanus sativus] (39)
| | | |
| | /--99--+ \---------------------- GSBRNA2T00048022001 [Brassica napus] (76)
| | | |
| | | | /------- GSBRNA2T00001506001 [Brassica napus] (13)
| | /---99--+ \----------93----------+
| | | | \------- XP_009126657.1 [Brassica rapa] (57)
\--57--+ | |
| | \------------------------------------- Tp6g21500 [Thellungiella parvula] (5)
| |
| | /------- XP_009131970.1 [Brassica rapa] (11)
| | |
| | /--100--+------- XP_009131969.1 [Brassica rapa] (27)
| | | |
| | | \------- GSBRNA2T00148776001 [Brassica napus] (63)
| | /--100-+
| /--100-+ | | /------- GSBRNA2T00141024001 [Brassica napus] (28)
| | | | \---96--+
| | | /------97------+ \------- XP_013623570.1 [Brassica oleracea] (35)
| | | | |
| | | | | /------- RrC7886_p1 [Raphanus raphanistrum] (37)
| | | | \------100-----+
| | | | \------- Rsa1.0_03605.1_g00003.1 [Raphanus sativus] (68)
| | | |
| | | | /------- Rsa1.0_03900.1_g00003.1 [Raphanus sativus] (26)
| | | | /--100--+
| | \--100--+ | \------- RrC1916_p1 [Raphanus raphanistrum] (65)
\---80--+ | /--94--+
| | | | /------- GSBRNA2T00047920001 [Brassica napus] (43)
| | | \---97--+
| | /--100--+ \------- XP_009120502.1 [Brassica rapa] (74)
| | | |
| | | | /------- GSBRNA2T00133177001 [Brassica napus] (47)
| \--100-+ \------100-----+
| | \------- XP_013609906.1 [Brassica oleracea] (69)
| |
| \------------------------------ Thhalv10014884m [Eutrema salsugineum] (48)
|
\---------------------------------------------------- Bostr.26833s0254.1.p [Boechera stricta] (40)
|




