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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2043
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 121:
/----- 487890 [Arabidopsis lyrata] (2)
/-100+
| \----- Araha.2597s0029.1.p [Arabidopsis halleri] (34)
/----100---+
| \---------- AT5G10570.1 [Arabidopsis thaliana] (39)
|
| /----- Csa20g015900.1 [Camelina sativa] (22)
/-100+ /-100+
| | | \----- Csa13g013340.1 [Camelina sativa] (49)
| | /-70-+
| | | \---------- Bostr.13175s0042.1.p [Boechera stricta] (53)
| \-100-+
| | /----- Carubv10001486m [Capsella rubella] (41)
| \---100---+
| \----- Cagra.1085s0002.1.p [Capsella grandiflora] (54)
|
/-68-+ /----- RrC2433_p6 [Raphanus raphanistrum] (6)
| | /---100---+
| | | \----- Rsa1.0_00907.1_g00010.1 [Raphanus sativus] (10)
| | |
| | /-100-+ /----- XP_009122040.1 [Brassica rapa] (8)
| | | | /-100+
| | | | | \----- GSBRNA2T00135878001 [Brassica napus] (12)
| | | \-100+
/-----------100-----------+ | | | /----- XP_013609563.1 [Brassica oleracea] (35)
| | \-100+ \-100+
| | | \----- GSBRNA2T00103989001 [Brassica napus] (56)
| | |
| | | /----- Tp6g32860 [Thellungiella parvula] (63)
| | \-------76------+
| | \----- Thhalv10016038m [Eutrema salsugineum] (68)
| |
| \------------------------------- KFK23906.1 [Arabis alpina] (78)
|
| /----- XP_009130519.1 [Brassica rapa] (3)
| /-100+
| | \----- GSBRNA2T00064787001 [Brassica napus] (37)
| /-100+
| | | /----- XP_013618266.1 [Brassica oleracea] (13)
| | \-97-+
| /----100---+ \----- GSBRNA2T00093985001 [Brassica napus] (65)
| | |
| | | /----- RrC5562_p1 [Raphanus raphanistrum] (26)
| | \---100---+
| | \----- Rsa1.0_00889.1_g00006.1 [Raphanus sativus] (40)
| |
| | /----- Rsa1.0_03397.1_g00002.1 [Raphanus sativus] (7)
| /-99-+ /---100---+
| | | | \----- RrC13565_p1 [Raphanus raphanistrum] (46)
| | | |
| | | /-100-+ /----- XP_009150653.1 [Brassica rapa] (11)
/-100+ | | | | /-100+
| | | | | | | \----- GSBRNA2T00000704001 [Brassica napus] (77)
| | /-100+ \-100+ \-100+
| | | | | \---------- XP_013622137.1 [Brassica oleracea] (23)
| | | | |
| | | | \--------------------- 676751916 [Sisymbrium irio] (76)
| | /-97-+ |
| | | | \------------------------------- Tp2g28730 [Thellungiella parvula] (24)
| | | |
| | | \------------------------------------ Thhalv10004732m [Eutrema salsugineum] (20)
| | |
| | | /---------- AT5G65640.1 [Arabidopsis thaliana] (9)
| | | |
| | /-100+ /------100------+ /----- 496795 [Arabidopsis lyrata] (50)
| | | | | \-100+
| | | | | \----- Araha.37462s0003.1.p [Arabidopsis halleri] (75)
| | | | |
| | | | | /----- Carubv10026606m [Capsella rubella] (17)
--100+ | | | | /---100---+
| | | \------100-----+ | \----- Cagra.0917s0023.1.p [Capsella grandiflora] (70)
| | | | |
| | /--99-+ | /--98-+ /----- Csa02g074670.1 [Camelina sativa] (32)
| | | | | | | /-88-+
| | | | | | | | \----- Csa11g102870.1 [Camelina sativa] (74)
| | | | \-97-+ \-100+
| | | | | \---------- Csa18g039460.1 [Camelina sativa] (61)
| \-100+ | |
| | | \--------------------- Bostr.0568s0223.1.p [Boechera stricta] (25)
| | |
| | \---------------------------------------------- KFK28233.1 [Arabis alpina] (38)
| |
| \---------------------------------------------------- AA4G00283 [Aethionema arabicum] (30)
|
| /----- XP_010519174.1 [Tarenaya hassleriana] (31)
| /-100+
| | \----- XP_010525344.1 [Tarenaya hassleriana] (60)
\------------------------100------------------------+
\---------- XP_010518919.1 [Tarenaya hassleriana] (64)
Subtree rooted at node 149:
/---------------------------------------------------- (121)
|
| /-------------------------- Thecc1EG034574t1 [Theobroma cacao] (5)
| |
| | /----- Gh_D05G3821 [Gossypium hirsutum] (29)
| | /-100+
| | | \----- Gorai.009G226200.1 [Gossypium raimondii] (45)
| /-99-+ /----100---+
| | | | | /----- Gh_A05G3762 [Gossypium hirsutum] (42)
| | | | \-99-+
| | | | \----- Cotton_A_19514_BGI-A2_v1.0 [Gossypium arboreum] (51)
| | \-99-+
| | | /--------------- Gh_A06G0241 [Gossypium hirsutum] (36)
| | | |
| /-97-+ | | /----- Gorai.010G031800.1 [Gossypium raimondii] (47)
/-100+ | | \-100-+ /-100+
| | | | | | \----- Gh_D06G2316 [Gossypium hirsutum] (67)
| | | | \-99-+
| | | | \---------- Cotton_A_27862_BGI-A2_v1.0 [Gossypium arboreum] (66)
| | | |
| | /-98-+ \------------------------------- evm.model.supercontig_177.1 [Carica papaya] (69)
| | | |
| | | | /----- orange1.1g018897m [Citrus sinensis] (33)
| | | | /-100+
| | | | | \----- Ciclev10001683m [Citrus clementina] (71)
| | /-100+ \-----------100-----------+
| | | | | /----- Neem_4737_f_1 [Azadirachta indica] (43)
/-100+ | | | \-100+
| | | | | \----- Neem_36839_f_1 [Azadirachta indica] (73)
| | | | |
| | \-100-+ \----------------------------------------- Eucgr.F02171.1.p [Eucalyptus grandis] (72)
| | |
| | | /----- Eucgr.F00459.1.p [Eucalyptus grandis] (16)
| | | /-77-+
| | | | \----- EcC015428.40 [Eucalyptus camaldulensis] (21)
| | \----------------100----------------+
| | \---------- EcS780960.10 [Eucalyptus camaldulensis] (44)
| |
| \--------------------------------------------------------- Eucgr.I00608.1.p [Eucalyptus grandis] (55)
|
| /----- Cotton_A_29902_BGI-A2_v1.0 [Gossypium arboreum] (4)
--100+ /-100+
| | \----- Gh_A02G1404 [Gossypium hirsutum] (15)
| /-100+
| | | /----- Gh_D03G0317 [Gossypium hirsutum] (48)
| | \-86-+
| | \----- Gorai.003G035900.1 [Gossypium raimondii] (62)
| /--74-+
| | | /---------- Gh_A11G1886 [Gossypium hirsutum] (18)
| | | |
| | | |---------- Cotton_A_39830_BGI-A2_v1.0 [Gossypium arboreum] (27)
| | \-100+
| /-100+ | /----- Gorai.007G229900.1 [Gossypium raimondii] (52)
| | | \-95-+
| | | \----- Gh_D11G2082 [Gossypium hirsutum] (58)
\-----------------97----------------+ |
| \--------------------- Thecc1EG000915t1 [Theobroma cacao] (28)
|
\-------------------------- evm.model.supercontig_129.19 [Carica papaya] (57)
Root part of tree:
/------------------------------------------------------------------- Ciclev10025967m [Citrus clementina] (1)
|
|------------------------------------------------------------------- orange1.1g038389m [Citrus sinensis] (14)
+
| /--------------------------------------------- (149)
| |
\---------100---------+ /---------------------- Neem_6269_f_2 [Azadirachta indica] (19)
\----------100---------+
\---------------------- Neem_26037_f_1 [Azadirachta indica] (59)
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