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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2111
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 129:
/----- Carubv10022351m [Capsella rubella] (3)
/---100---+
| \----- Cagra.1670s0031.1.p [Capsella grandiflora] (50)
|
/-100-+ /----- Csa07g064020.1 [Camelina sativa] (19)
| | /-99-+
| | | \----- Csa16g055400.1 [Camelina sativa] (77)
/-81-+ \-100+
| | \---------- Csa09g097350.1 [Camelina sativa] (51)
| |
| \--------------------- Bostr.22157s0066.1.p [Boechera stricta] (20)
/-100+
| | /---------- AT1G62700.1 [Arabidopsis thaliana] (39)
| | |
| \------100------+ /----- Araha.9431s0002.1.p [Arabidopsis halleri] (65)
| \-100+
| \----- 475082 [Arabidopsis lyrata] (67)
|
| /----- RrC19_p1 [Raphanus raphanistrum] (16)
| /---100---+
/--------------100-------------+ | \----- Rsa1.0_02032.1_g00004.1 [Raphanus sativus] (17)
| | |
| | | /----- GSBRNA2T00050536001 [Brassica napus] (22)
| | /-100-+ /-100+
| | | | | \----- XP_013609845.1 [Brassica oleracea] (33)
| | | | |
| | | \-100+---------- GSBRNA2T00086386001 [Brassica napus] (24)
| | | |
| \----99---+ \---------- XP_009113056.1 [Brassica rapa] (35)
| |
| | /----- Tp2g01960 [Thellungiella parvula] (25)
| | /-99-+
| | | \----- 676732362 [Sisymbrium irio] (64)
| \----96----+
| \---------- Thhalv10023502m [Eutrema salsugineum] (34)
|
| /---------- XP_010546359.1 [Tarenaya hassleriana] (4)
| |
| /----------------------100---------------------+ /----- XP_010533763.1 [Tarenaya hassleriana] (13)
| | \-75-+
| | \----- XP_010553468.1 [Tarenaya hassleriana] (21)
| |
--100+ | /----- Gh_A12G1990 [Gossypium hirsutum] (5)
| | /-100+
| | | \----- Cotton_A_07124_BGI-A2_v1.0 [Gossypium arboreum] (28)
| | /-100+
| | | | /----- Gh_D12G2169 [Gossypium hirsutum] (40)
| | | \-53-+
| | /--99-+ \----- Gorai.008G236400.1 [Gossypium raimondii] (74)
| | | |
| | | \--------------- Thecc1EG016035t2 [Theobroma cacao] (59)
| | |
| | /---------88--------+ /----- Gorai.004G201100.1 [Gossypium raimondii] (9)
| | | | /-100+
| | | | | \----- Gh_D08G1858 [Gossypium hirsutum] (38)
| | | \----100---+
| | | | /----- Cotton_A_18426_BGI-A2_v1.0 [Gossypium arboreum] (42)
| | | \-93-+
| | | \----- Gh_A08G1552 [Gossypium hirsutum] (43)
| | |
| | | /------------------------------- Eucgr.D02027.1.p [Eucalyptus grandis] (23)
| | | |
| | | | /----- Ciclev10006988m [Citrus clementina] (45)
\-100+ | | /-100+
| /-85-+ | | \----- orange1.1g018596m [Citrus sinensis] (53)
| | | | /----100---+
| | | | | \---------- Neem_5527_f_1 [Azadirachta indica] (54)
| | | /-100+ |
| | | | | /-100+ /--------------- Thecc1EG014939t1 [Theobroma cacao] (46)
| | | | | | | |
| | | | | | | | /----- Gh_A07G0349 [Gossypium hirsutum] (55)
| | | | | | \-100-+ /-98-+
| | | | | | | | \----- Cotton_A_03573_BGI-A2_v1.0 [Gossypium arboreum] (63)
| | | | | | \-100+
| | | | \-100+ | /----- Gorai.001G048200.1 [Gossypium raimondii] (56)
| | | | | \-89-+
| | \-84-+ | \----- Gh_D07G0411 [Gossypium hirsutum] (75)
| | | |
| | | | /----- evm.model.supercontig_3.311 [Carica papaya] (47)
| /-100-+ | \---------100--------+
| | | | \----- Eucgr.A02887.1.p [Eucalyptus grandis] (66)
| | | |
| | | | /----- orange1.1g020354m [Citrus sinensis] (48)
| | | | /-100+
| | | | | \----- Ciclev10024218m [Citrus clementina] (76)
| | | \-----------100-----------+
| | | \---------- Neem_8133_f_4 [Azadirachta indica] (72)
| | |
\-100+ | /----- Gorai.003G169000.1 [Gossypium raimondii] (32)
| | /-65-+
| | | \----- Gh_D03G1542 [Gossypium hirsutum] (44)
| | /-96-+
| | | \---------- Gh_A03G1986 [Gossypium hirsutum] (36)
| \--------------100-------------+
| \--------------- Cotton_A_17125_BGI-A2_v1.0 [Gossypium arboreum] (73)
|
\---------------------------------------------------- evm.model.supercontig_29.118 [Carica papaya] (58)
Root part of tree:
/------------------------------------------------------------------- Csa17g016480.1 [Camelina sativa] (1)
|
|------------------------------------------------------------------- Csa14g015200.1 [Camelina sativa] (49)
|
| /------------- XP_009110661.1 [Brassica rapa] (2)
| |
| /--93--+ /------- XP_013602769.1 [Brassica oleracea] (26)
| | \--92-+
| /--100-+ \------- GSBRNA2T00047395001 [Brassica napus] (78)
| | |
| | \-------------------- GSBRNA2T00015204001 [Brassica napus] (41)
| /-100-+
| | | /------- RrC17699_p1 [Raphanus raphanistrum] (27)
| | \--------100--------+
| | \------- Rsa1.0_00020.1_g00053.1 [Raphanus sativus] (71)
| |
| | /------- (129)
| | /--------100--------+
| | | \------- AA65G00271 [Aethionema arabicum] (18)
| | |
| | | /------- RrC1107_p4 [Raphanus raphanistrum] (12)
| | | /-----100----+
| | | | \------- Rsa1.0_01629.1_g00002.1 [Raphanus sativus] (31)
| | | |
| |--95-+--100-+ /------- GSBRNA2T00090371001 [Brassica napus] (29)
| /--100-+ | | /-100-+
| | | | | | \------- GSBRNA2T00105458001 [Brassica napus] (30)
+ | | | \--100-+
| | | | \------------- GSBRNA2T00035413001 [Brassica napus] (69)
| | | |
| | | \--------------------------- Tp1g10880 [Thellungiella parvula] (15)
| | |
| | |--------------------------------- 676755314 [Sisymbrium irio] (6)
| | |
| | | /------- GSBRNA2T00044605001 [Brassica napus] (14)
| /--100-+ | /--93-+
| | | | | \------- XP_013584293.1 [Brassica oleracea] (60)
| | | | /--100-+
| | | | | \------------- XP_009148605.1 [Brassica rapa] (57)
| | | \-----100----+
| | | | /------- RrC1065_p2 [Raphanus raphanistrum] (37)
| | | \-----100----+
| /--97--+ | \------- Rsa1.0_00018.1_g00047.1 [Raphanus sativus] (61)
| | | |
| | | \---------------------------------------- Thhalv10007823m [Eutrema salsugineum] (62)
| | |
| | | /------- Araha.0650s0016.1.p [Arabidopsis halleri] (8)
| | | /--61-+
| | | | \------- 471376 [Arabidopsis lyrata] (11)
| /-100-+ \---------------100---------------+
| | | \------------- AT1G12260.1 [Arabidopsis thaliana] (70)
| | |
| | | /------- Carubv10009366m [Capsella rubella] (10)
| | |----------------------100---------------------+
\--100-+ | \------- Cagra.0568s0135.1.p [Capsella grandiflora] (68)
| |
| \------------------------------------------------------ Bostr.13671s0233.1.p [Boechera stricta] (52)
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\------------------------------------------------------------ Csa03g016020.1 [Camelina sativa] (7)
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