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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2208
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 136:
/--------------------- Bostr.18351s0323.1.p [Boechera stricta] (2)
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| /----- Csa15g079210.1 [Camelina sativa] (18)
| /-61-+
/-97-+ | \----- Csa19g058200.1 [Camelina sativa] (52)
| | /-100+
| | | \---------- Csa01g041700.1 [Camelina sativa] (42)
| \--99-+
| | /----- Carubv10014603m [Capsella rubella] (44)
| \---100---+
/-100+ \----- Cagra.1511s0010.1.p [Capsella grandiflora] (56)
| |
| | /----- AT2G18550.1 [Arabidopsis thaliana] (27)
| | /-82-+
/-100+ | | \----- Araha.2505s0001.1.p [Arabidopsis halleri] (39)
| | \------100------+
| | \---------- 343486 [Arabidopsis lyrata] (41)
| |
| \------------------------------- KFK40238.1 [Arabis alpina] (21)
|
| /----- XP_009114696.1 [Brassica rapa] (3)
| /-100+
| | \----- XP_013595896.1 [Brassica oleracea] (46)
| /-100+
/-95-+ | | /----- RrC6022_p2 [Raphanus raphanistrum] (35)
| | | \-100+
| | /--99-+ \----- Rsa1.0_04136.1_g00001.1 [Raphanus sativus] (61)
| | | |
| | /-89-+ \--------------- 676718904 [Sisymbrium irio] (64)
| | | |
| | /-98-+ \--------------------- Thhalv10022814m [Eutrema salsugineum] (43)
| | | |
| | | \-------------------------- Tp3g32030 [Thellungiella parvula] (75)
| | |
| \-95-+ /----- Rsa1.0_00254.1_g00001.1 [Raphanus sativus] (9)
/-100+ | /---100---+
| | | | \----- RrC1092_p1 [Raphanus raphanistrum] (48)
| | | |
| | \-------99------+ /----- XP_013609718.1 [Brassica oleracea] (10)
| | | /-100+
| | | | \----- GSBRNA2T00073557001 [Brassica napus] (58)
| | \-100+
| | | /----- GSBRNA2T00044984001 [Brassica napus] (54)
| | \-100+
| | \----- XP_009124618.1 [Brassica rapa] (76)
| |
| \----------------------------------------- AA33G00123 [Aethionema arabicum] (22)
|
| /----- XP_010548355.1 [Tarenaya hassleriana] (11)
| /-100+
| | \----- XP_010531178.1 [Tarenaya hassleriana] (63)
| /-----------100-----------+
| | \---------- XP_010526748.1 [Tarenaya hassleriana] (51)
| |
| | /---------- Cotton_A_01632_BGI-A2_v1.0 [Gossypium arboreum] (12)
| | |
/--93-+ | | /----- Gorai.003G016600.1 [Gossypium raimondii] (33)
| | | /-100+-100+
| | | | | \----- Gh_D03G0161 [Gossypium hirsutum] (34)
| | | | |
| | | | \---------- Gh_A02G1563 [Gossypium hirsutum] (62)
| | | /--93-+
| | | | | /----- Gh_A11G1721 [Gossypium hirsutum] (17)
| | | | | /-99-+
| | | | | | \----- Gh_D11G1879 [Gossypium hirsutum] (70)
| | /-61-+ | \-100+
| | | | | \---------- Gorai.007G206000.1 [Gossypium raimondii] (68)
| | | | |
| | | | /-100+ /----- Gh_D11G0473 [Gossypium hirsutum] (16)
| | | | | | /-100+
| | | | | | | \----- Gorai.007G051100.1 [Gossypium raimondii] (30)
| | | | | | /-100+
| | | | | | | | /----- Gh_A11G0410 [Gossypium hirsutum] (38)
| | | | | | | \-100+
| | | | /-91-+ \--97-+ \----- Cotton_A_02021_BGI-A2_v1.0 [Gossypium arboreum] (66)
/-99-+ | | | | | |
| | | | | | | \--------------- Thecc1EG000438t1 [Theobroma cacao] (40)
| | \-99-+ | | |
| | | | | | /----- Eucgr.H01254.1.p [Eucalyptus grandis] (15)
| | | \-95-+ \---------100--------+
| | | | \----- Eucgr.I02464.1.p [Eucalyptus grandis] (59)
| | | |
| | | | /----- XP_010521473.1 [Tarenaya hassleriana] (45)
| | | \-----------100-----------+
| | | \----- XP_010558140.1 [Tarenaya hassleriana] (50)
| | |
| | | /----- Ciclev10026414m [Citrus clementina] (14)
| | | /-100+
| | | | \----- orange1.1g026974m [Citrus sinensis] (26)
| | \--------------100-------------+
/-76-+ | | /----- Neem_20836_f_1 [Azadirachta indica] (29)
| | | \-100+
| | | \----- Neem_1389_f_6 [Azadirachta indica] (31)
| | |
| | \---------------------------------------------------- AA30G00184 [Aethionema arabicum] (36)
| |
| | /----- Csa11g005040.1 [Camelina sativa] (4)
| | |
| | /------100------+----- Csa12g004730.1 [Camelina sativa] (13)
| | | |
| | | \----- Csa10g004490.1 [Camelina sativa] (20)
| | |
| | | /----- Cagra.5996s0004.1.p [Capsella grandiflora] (24)
| | |------100------+
| | | \----- Carubv10006436m [Capsella rubella] (55)
| \----------------100----------------+
--85-+ | /----- 490960 [Arabidopsis lyrata] (47)
| | /-99-+
| | | \----- Araha.41052s0004.1.p [Arabidopsis halleri] (73)
| | /-100+
| | | \---------- AT4G36740.1 [Arabidopsis thaliana] (65)
| \--67-+
| \--------------- Bostr.7867s1530.1.p [Boechera stricta] (69)
|
| /----- XP_013596505.1 [Brassica oleracea] (7)
| /-100+
| | \----- GSBRNA2T00100145001 [Brassica napus] (74)
| /-100+
| | \---------- XP_009138447.1 [Brassica rapa] (37)
| /-100-+
| | | /----- RrC13539_p1 [Raphanus raphanistrum] (19)
| | \----95---+
\-------------------100------------------+ \----- Rsa1.0_03010.1_g00001.1 [Raphanus sativus] (28)
|
\--------------------- Thhalv10026207m [Eutrema salsugineum] (57)
Root part of tree:
/------------------------------------------------------------------- GSBRNA2T00027215001 [Brassica napus] (1)
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| /---------- GSBRNA2T00058501001 [Brassica napus] (8)
|---------------------------100--------------------------+
| \---------- XP_013627348.1 [Brassica oleracea] (23)
|
| /---------- (136)
| /------------------95-----------------+
| | \---------- Tp7g34400 [Thellungiella parvula] (67)
| |
+ | /---------- GSBRNA2T00131048001 [Brassica napus] (5)
| | /---100--+
| | | \---------- XP_013583998.1 [Brassica oleracea] (60)
| /---100--+ /---100---+
| | | | | /---------- XP_009142335.1 [Brassica rapa] (72)
| | | | \---100--+
| | | /---99---+ \---------- GSBRNA2T00121502001 [Brassica napus] (77)
| | | | |
| | | | | /---------- Rsa1.0_00037.1_g00022.1 [Raphanus sativus] (6)
| | \----93---+ \--------100-------+
\---100---+ | \---------- RrC131_p10 [Raphanus raphanistrum] (49)
| |
| \-------------------------------------- 676721122 [Sisymbrium irio] (25)
|
| /---------- Rsa1.0_00007.1_g00004.1 [Raphanus sativus] (32)
| /---100--+
| | \---------- RrC5890_p1 [Raphanus raphanistrum] (53)
\-----------------100-----------------+
\------------------- RrC42628_p1 [Raphanus raphanistrum] (71)
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