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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2215
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 110:
/----- AT2G38250.1 [Arabidopsis thaliana] (2)
/------100------+
| \----- 870219 [Arabidopsis lyrata] (67)
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| /---------- Csa04g051940.1 [Camelina sativa] (7)
/--------100--------+ |
| | /-100+ /----- Csa05g015280.1 [Camelina sativa] (26)
| | | \-72-+
| | | \----- Csa06g041010.1 [Camelina sativa] (54)
| \--93-+
| | /----- Bostr.23794s0250.1.p [Boechera stricta] (13)
| \---100---+
| \----- Cagra.4190s0013.1.p [Capsella grandiflora] (57)
|
| /----- GSBRNA2T00116900001 [Brassica napus] (14)
| /-100+
| | \----- XP_009143406.1 [Brassica rapa] (55)
| /-59-+
| | | /----- GSBRNA2T00152759001 [Brassica napus] (31)
| | \-100+
| /-100-+ \----- XP_013634279.1 [Brassica oleracea] (43)
/-100+ | |
| | /-77-+ \--------------- Rsa1.0_00589.1_g00013.1 [Raphanus sativus] (16)
| | | |
| | | \--------------------- 676755586 [Sisymbrium irio] (48)
| | |
| | | /----- GSBRNA2T00124872001 [Brassica napus] (23)
| | | /-100+
| | /-55-+ | \----- XP_009133240.1 [Brassica rapa] (53)
| | | | /-95-+
| | | | | | /----- XP_013626879.1 [Brassica oleracea] (56)
| | | | | \-100+
/--94-+ | | | | \----- GSBRNA2T00079157001 [Brassica napus] (60)
| | | /-94-+ \----100---+
| | | | | |--------------- Rsa1.0_02075.1_g00003.1 [Raphanus sativus] (51)
| | | | | |
| | | | | \--------------- RrC7688_p2 [Raphanus raphanistrum] (52)
| | \-89-+ |
/-100+ | | \------------------------------- Tp4g20540 [Thellungiella parvula] (18)
| | | |
| | | \------------------------------------ KFK36721.1 [Arabis alpina] (33)
| | |
| | \---------------------------------------------- AA68G00038 [Aethionema arabicum] (63)
| |
| \---------------------------------------------------- XP_010553239.1 [Tarenaya hassleriana] (64)
|
| /----- Eucgr.A00520.1.p [Eucalyptus grandis] (4)
| /-100+
| | \----- EcS732177.10 [Eucalyptus camaldulensis] (44)
| /-82-+
| | | /----- orange1.1g022743m [Citrus sinensis] (25)
| | \-100+
| /---------89---------+ \----- Ciclev10012342m [Citrus clementina] (69)
| | |
| | \--------------- Neem_5742_f_8 [Azadirachta indica] (42)
/-100+ |
| | | /-------------------------- Thecc1EG021682t1 [Theobroma cacao] (8)
| | | |
| | | | /----- Gh_A01G1962 [Gossypium hirsutum] (21)
| | | | /-96-+
| | | | | \----- Cotton_A_00322_BGI-A2_v1.0 [Gossypium arboreum] (61)
| | /-100+ /-100+ /----100---+
| | | | | | | | /----- Gh_D01G2222 [Gossypium hirsutum] (27)
| | | | | | | \-100+
| | | | | | | \----- Gorai.002G262900.1 [Gossypium raimondii] (30)
| | | | | | |
| | | | | \-59-+ /---------- Gh_A09G2437 [Gossypium hirsutum] (32)
| | | | | | |
| | | | | | /-93-+ /----- Gh_D09G1565 [Gossypium hirsutum] (39)
| | | \-100+ | | \-98-+
--85-+ | | | \-100-+ \----- Gorai.006G183000.1 [Gossypium raimondii] (58)
| | | | |
| \------100------+ | \--------------- Cotton_A_22342_BGI-A2_v1.0 [Gossypium arboreum] (62)
| | |
| | | /----- Cotton_A_03492_BGI-A2_v1.0 [Gossypium arboreum] (35)
| | | /-100+
| | | | \----- Gh_A04G0781 [Gossypium hirsutum] (45)
| | \---------100--------+
| | | /----- Gorai.012G114700.1 [Gossypium raimondii] (46)
| | \-53-+
| | \----- Gh_D04G1272 [Gossypium hirsutum] (68)
| |
| \----------------------------------------- evm.model.supercontig_11.127 [Carica papaya] (29)
|
\-------------------------------------------------------------- XP_010553113.1 [Tarenaya hassleriana] (37)
Root part of tree:
/------------------------------------------------------------------- Csa08g063060.1 [Camelina sativa] (1)
|
|------------------------------------------------------------------- Csa13g001500.1 [Camelina sativa] (49)
|
| /------- (110)
| /-------------------67------------------+
| | \------- AA19G00371 [Aethionema arabicum] (40)
| |
| | /------- GSBRNA2T00119554001 [Brassica napus] (5)
| | /-100-+
| | | \------- XP_009125422.1 [Brassica rapa] (65)
| | /--100-+
| | | \------------- XP_013619736.1 [Brassica oleracea] (59)
| | /--95--+
| | | | /------- RrC10044_p2 [Raphanus raphanistrum] (10)
| | | \-----100----+
| | | \------- Rsa1.0_14464.1_g00001.1 [Raphanus sativus] (15)
| | |
| | | /------- GSBRNA2T00032435001 [Brassica napus] (6)
| | | /-100-+
| | | | \------- XP_013610158.1 [Brassica oleracea] (34)
| | /--91-+-----100-----+
| | | | | /------- Rsa1.0_00129.1_g00005.1 [Raphanus sativus] (12)
| | | | \-100-+
+ | | | \------- RrC1953_p4 [Raphanus raphanistrum] (47)
| | | |
| | | |--------------------------- Tp6g40690 [Thellungiella parvula] (19)
| | /--100-+ |
| /--53--+ | | \--------------------------- 676718198 [Sisymbrium irio] (20)
| | | | |
| | | | | /------- GSBRNA2T00049221001 [Brassica napus] (9)
| | | | | /-100-+
| | | | | | \------- XP_009130657.1 [Brassica rapa] (17)
| | |--100-+ \--------100--------+
| | | | | /------- XP_013626801.1 [Brassica oleracea] (36)
| | | | \-100-+
| | | | \------- GSBRNA2T00134148001 [Brassica napus] (66)
| | | |
| | | \---------------------------------------- Thhalv10015815m [Eutrema salsugineum] (70)
| | |
| /-100-+ | /------- Carubv10001432m [Capsella rubella] (11)
| | | |-------------------96------------------+
| | | | \------- Cagra.4082s0018.1.p [Capsella grandiflora] (38)
| | | |
| | | | /------- Araha.3975s0009.1.p [Arabidopsis halleri] (22)
| | | | /-100-+
| | | | | \------- 486939 [Arabidopsis lyrata] (50)
\--100-+ | |---------------100---------------+
| | | \------------- AT5G01380.1 [Arabidopsis thaliana] (28)
| | |
| | \----------------------------------------------- KFK24646.1 [Arabis alpina] (41)
| |
| \------------------------------------------------------ Bostr.6251s0108.1.p [Boechera stricta] (3)
|
\------------------------------------------------------------ Csa20g001710.1 [Camelina sativa] (24)
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