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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2220
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 127:
/----- Gorai.012G054300.1 [Gossypium raimondii] (2)
/-82-+
| \----- Gh_D04G0444 [Gossypium hirsutum] (31)
/-100+
| \---------- Cotton_A_19854_BGI-A2_v1.0 [Gossypium arboreum] (16)
|
| /----- Gh_A09G0154 [Gossypium hirsutum] (38)
/--93-+ /-100+
| | | \----- Cotton_A_30610_BGI-A2_v1.0 [Gossypium arboreum] (44)
| | |
| \-100+---------- Gh_D09G0146 [Gossypium hirsutum] (51)
/-100+ |
| | \---------- Gorai.006G017200.1 [Gossypium raimondii] (75)
| |
/-100+ \--------------------- Thecc1EG018552t1 [Theobroma cacao] (29)
| |
| | /----- orange1.1g016972m [Citrus sinensis] (27)
/---------100--------+ \---------100--------+
| | \----- Ciclev10011968m [Citrus clementina] (67)
| |
| \------------------------------- evm.model.supercontig_140.55 [Carica papaya] (30)
|
| /----- RrC12344_p1 [Raphanus raphanistrum] (7)
| /---100---+
| | \----- Rsa1.0_00387.1_g00032.1 [Raphanus sativus] (33)
| |
| /-100-+ /----- XP_009151829.1 [Brassica rapa] (8)
| | | /-100+
| | | | \----- GSBRNA2T00144536001 [Brassica napus] (15)
| | \-95-+
| | | /----- XP_013599446.1 [Brassica oleracea] (47)
| | \-99-+
| | \----- GSBRNA2T00142868001 [Brassica napus] (61)
| /-100+
| | | /----- GSBRNA2T00109603001 [Brassica napus] (50)
| | | /-72-+
| | | | \----- XP_013607214.1 [Brassica oleracea] (58)
| | | /-66-+
| /-74-+ | | \---------- GSBRNA2T00009837001 [Brassica napus] (72)
/----74---+ | | \-100-+
| | | | \--------------- XP_009111615.1 [Brassica rapa] (64)
| | /-95-+ |
| | | | \-------------------------- Tp2g17550 [Thellungiella parvula] (26)
| | | |
| | /-98-+ \------------------------------- 676759574 [Sisymbrium irio] (56)
| | | |
| | | \------------------------------------ Thhalv10004599m [Eutrema salsugineum] (10)
| | |
| | | /----- Carubv10017644m [Capsella rubella] (17)
| | | /---------100--------+
| | | | \----- Cagra.4191s0001.1.p [Capsella grandiflora] (21)
| | | |
| | /-100+ | /--------------- Bostr.0556s0541.1.p [Boechera stricta] (18)
| | | | | |
| | | | /-100+ | /----- AT3G28920.1 [Arabidopsis thaliana] (54)
| | | | | | /--95-+ /-91-+
| | | | | | | | | \----- 484662 [Arabidopsis lyrata] (60)
| | | | | | | \-99-+
| | | | | | | \---------- Araha.2482s0003.1.p [Arabidopsis halleri] (74)
| | | | | \-68-+
| \-100-+ \----97---+ | /----- Csa04g018200.1 [Camelina sativa] (24)
| | | | /-99-+
| | | | | \----- Csa09g021330.1 [Camelina sativa] (35)
| | | \----100---+
| | | \---------- Csa06g011260.1 [Camelina sativa] (34)
| | |
| | \------------------------------- KFK33764.1 [Arabis alpina] (66)
| |
| \---------------------------------------------- AA53G01081 [Aethionema arabicum] (57)
|
| /---------------------------------------------- AA40G00567 [Aethionema arabicum] (3)
--100+ |
| | /----------------------------------------- KFK25766.1 [Arabis alpina] (4)
| | |
| | | /--------------------- 676789410 [Sisymbrium irio] (5)
| | | |
| | | | /----- XP_009121598.1 [Brassica rapa] (13)
| /-100-+ | | /-100+
| | | | | | \----- GSBRNA2T00135543001 [Brassica napus] (36)
| | | | /-96-+ |
| | | | | | /-100+---------- XP_013614396.1 [Brassica oleracea] (28)
| | | | | | | |
| | | | | | | \---------- GSBRNA2T00142504001 [Brassica napus] (32)
| | \-100+ | \-100-+
| | | /---100---+ | /----- Rsa1.0_04794.1_g00002.1 [Raphanus sativus] (70)
| | | | | \---100---+
| | | | | \----- RrC10018_p1 [Raphanus raphanistrum] (71)
| | | | |
| | | | \-------------------------- Tp6g28860 [Thellungiella parvula] (68)
| | | |
| | | | /----- Csa20g021700.1 [Camelina sativa] (11)
| | | | /-98-+
| | | | | \----- Csa08g007290.1 [Camelina sativa] (41)
| /-100+ | | /-100+
| | | \-93-+ | \---------- Csa13g018040.1 [Camelina sativa] (42)
| | | | /-100-+
| | | | | | /----- Cagra.1036s0035.1.p [Capsella grandiflora] (45)
| | | | | \---100---+
| | | | /-99-+ \----- Carubv10003631m [Capsella rubella] (62)
| | | | | |
| | | | | \--------------------- Bostr.2902s0256.1.p [Boechera stricta] (14)
| | | | /-99-+
| | | | | |-------------------------- AT5G15210.1 [Arabidopsis thaliana] (69)
\-80-+ | | | |
| | \-100+ \-------------------------- 488363 [Arabidopsis lyrata] (73)
| | |
| | \------------------------------- Thhalv10016088m [Eutrema salsugineum] (12)
| |
| | /----- XP_010550055.1 [Tarenaya hassleriana] (6)
| \----------------------100---------------------+
| \----- XP_010551857.1 [Tarenaya hassleriana] (49)
|
\--------------------------------------------------------- XP_010552878.1 [Tarenaya hassleriana] (20)
Root part of tree:
/------------------------------------------------------------------- Rsa1.0_05375.1_g00002.1 [Raphanus sativus] (1)
|
|------------------------------------------------------------------- RrC29477_p1 [Raphanus raphanistrum] (55)
|
| /------ (127)
| /----------100----------+
| | \------ AA9G00043 [Aethionema arabicum] (23)
| |
| | /------ 494014 [Arabidopsis lyrata] (19)
| | /-------100-------+
| /--91--+ | \------ AT5G39760.1 [Arabidopsis thaliana] (53)
| | | |
| | | | /------ Csa11g055790.1 [Camelina sativa] (22)
| | | | |
| | \-100-+ /-100-+------ Csa10g046780.1 [Camelina sativa] (43)
+ | | | |
| /--96-+ | /--97-+ \------ Csa12g081670.1 [Camelina sativa] (46)
| | | | | |
| | | \--91-+ \------------ Carubv10007269m [Capsella rubella] (40)
| | | |
| /-100-+ | \------------------ Bostr.10058s0024.1.p [Boechera stricta] (59)
| | | |
| | | \------------------------------------- KFK26902.1 [Arabis alpina] (9)
| /-100-+ |
| | | \------------------------------------------- Thhalv10028098m [Eutrema salsugineum] (25)
| | |
| /--61-+ \------------------------------------------------- Tp7g02270 [Thellungiella parvula] (52)
| | |
| | \------------------------------------------------------- 676729886 [Sisymbrium irio] (37)
| |
\-100-+ /------ GSBRNA2T00114284001 [Brassica napus] (39)
| /-100-+
| | \------ XP_009139922.1 [Brassica rapa] (48)
\-----------------------100----------------------+
| /------ GSBRNA2T00017701001 [Brassica napus] (63)
\-100-+
\------ XP_013631916.1 [Brassica oleracea] (65)
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