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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2231
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 135:
/----- Gorai.012G006900.1 [Gossypium raimondii] (2)
/-100+
| \----- Gh_D04G0049 [Gossypium hirsutum] (47)
/-100+
| | /----- Gh_A05G3556 [Gossypium hirsutum] (18)
| \-100+
/-100-+ \----- Cotton_A_06087_BGI-A2_v1.0 [Gossypium arboreum] (60)
| |
| \--------------- Thecc1EG043349t1 [Theobroma cacao] (25)
|
/-100+ /----- Gh_A10G1798 [Gossypium hirsutum] (29)
| | /-78-+
| | | \----- Cotton_A_32480_BGI-A2_v1.0 [Gossypium arboreum] (58)
| \----100---+
/-100+ | /----- Gorai.011G234400.1 [Gossypium raimondii] (33)
| | \-100+
| | \----- Gh_D10G2536 [Gossypium hirsutum] (52)
| |
| \-------------------------- evm.model.supercontig_53.160 [Carica papaya] (19)
|
| /---------- orange1.1g024602m [Citrus sinensis] (27)
/-100+ |
| | /-100+ /----- Ciclev10033380m [Citrus clementina] (30)
| | | \-54-+
| | /-100-+ \----- orange1.1g045639m [Citrus sinensis] (50)
| | | |
| | | \--------------- Neem_563_f_1 [Azadirachta indica] (35)
/-76-+ \----97---+
| | | /----- Eucgr.G02745.1.p [Eucalyptus grandis] (51)
| | \------100------+
| | \----- Eucgr.J01041.1.p [Eucalyptus grandis] (64)
| |
| | /----- XP_010552949.1 [Tarenaya hassleriana] (16)
| \--------------100-------------+
| \----- XP_010543577.1 [Tarenaya hassleriana] (73)
|
| /----- Cagra.0834s0030.1.p [Capsella grandiflora] (4)
| /---100---+
| | \----- Carubv10016033m [Capsella rubella] (70)
| |
| /-100-+ /----- Csa15g013960.1 [Camelina sativa] (14)
| | | /-100+
| | | | \----- Csa01g011350.1 [Camelina sativa] (20)
| /-51-+ \-89-+
| | | \---------- Csa19g014100.1 [Camelina sativa] (75)
| | |
| | \--------------------- Bostr.22252s0013.1.p [Boechera stricta] (68)
| /-100+
| | | /----- 478379 [Arabidopsis lyrata] (17)
| | | /-100+
/-100+ | | | \----- Araha.4954s0008.1.p [Arabidopsis halleri] (67)
| | | \------100------+
| | | \---------- AT3G10470.1 [Arabidopsis thaliana] (41)
| | |
| | | /----- RrC16512_p1 [Raphanus raphanistrum] (6)
| | | /---100---+
| | | | \----- Rsa1.0_00951.1_g00020.1 [Raphanus sativus] (55)
| | | |
| | |------100------+ /----- GSBRNA2T00072910001 [Brassica napus] (10)
| | | | /-100+
| | | | | \----- XP_009122879.1 [Brassica rapa] (24)
| | | \-100+
| | | \---------- XP_013592850.1 [Brassica oleracea] (26)
| | |
| | /-92-+------------------------------- Tp3g08730 [Thellungiella parvula] (7)
| | | |
| | | | /----- XP_013584958.1 [Brassica oleracea] (9)
/-100-+ | | | /-100+
| | | | | | \----- GSBRNA2T00110953001 [Brassica napus] (42)
| | | | | /-97-+
| | | | | | | /----- XP_009146836.1 [Brassica rapa] (34)
| | | | | | \-100+
| | | | |------100------+ \----- GSBRNA2T00000395001 [Brassica napus] (74)
| | \-99-+ | |
| | | | | /----- RrC8100_p1 [Raphanus raphanistrum] (54)
| | | | \---100---+
| | | | \----- Rsa1.0_00544.1_g00005.1 [Raphanus sativus] (61)
| | | |
| | | |------------------------------- Thhalv10020904m [Eutrema salsugineum] (43)
| | | |
| | | \------------------------------- 676764944 [Sisymbrium irio] (45)
/-100+ | |
| | | \------------------------------------ AA93G00230 [Aethionema arabicum] (32)
| | |
| | \---------------------------------------------- AA12G00160 [Aethionema arabicum] (31)
| |
| | /---------- AT5G04390.1 [Arabidopsis thaliana] (21)
| | |
| | /-100+ /----- 908323 [Arabidopsis lyrata] (56)
| | | \-100+
| | | \----- Araha.13695s0003.1.p [Arabidopsis halleri] (57)
| | |
/-100+ | | /----- Cagra.9217s0019.1.p [Capsella grandiflora] (22)
| | | | /-100+
| | \-----------------100----------------+ | \----- Carubv10003458m [Capsella rubella] (46)
| | |-100+
| | | | /----- Csa20g005590.1 [Camelina sativa] (23)
| | | \-100+
| | | \----- Csa08g060100.1 [Camelina sativa] (38)
| | |
| | \--------------- Bostr.2128s0009.1.p [Boechera stricta] (53)
| |
| | /----- Thhalv10013864m [Eutrema salsugineum] (63)
| \-------------------------68------------------------+
| \----- KFK24889.1 [Arabis alpina] (66)
|
| /----- GSBRNA2T00023613001 [Brassica napus] (3)
--100+ /-100+
| | \----- XP_013627375.1 [Brassica oleracea] (15)
| /-100+
| | | /----- XP_009130819.1 [Brassica rapa] (62)
| | \-100+
| /----100---+ \----- GSBRNA2T00049321001 [Brassica napus] (71)
| | |
| | | /----- Rsa1.0_00285.1_g00016.1 [Raphanus sativus] (39)
| | \---100---+
| | \----- RrC2674_p4 [Raphanus raphanistrum] (40)
| |
| | /----- XP_013620812.1 [Brassica oleracea] (8)
| | /-88-+
| | | \----- GSBRNA2T00010742001 [Brassica napus] (48)
\-----------------90----------------+ /-84-+
| | | /----- XP_009125554.1 [Brassica rapa] (11)
| | \-100+
| | \----- GSBRNA2T00034346001 [Brassica napus] (36)
| /--76-+
| | | /----- GSBRNA2T00149934001 [Brassica napus] (13)
| | | /-72-+
| | | | \----- XP_013635728.1 [Brassica oleracea] (49)
\-100+ \-100+
| \---------- XP_013607849.1 [Brassica oleracea] (65)
|
\--------------------- RrC2542_p5 [Raphanus raphanistrum] (37)
Root part of tree:
/------------------------------------------------------------------- Rsa1.0_00482.1_g00015.1 [Raphanus sativus] (1)
|
|------------------------------------------------------------------- RrC1269_p4 [Raphanus raphanistrum] (59)
|
| /----------------- (135)
+ /-------99------+
| | \----------------- Tp6g38340 [Thellungiella parvula] (72)
| /-------100------+
| | \--------------------------------- 676718120 [Sisymbrium irio] (28)
| |
\-------100------+ /----------------- XP_009122602.1 [Brassica rapa] (5)
| /------100------+
| | \----------------- GSBRNA2T00136357001 [Brassica napus] (69)
\-------84-------+
| /----------------- GSBRNA2T00080902001 [Brassica napus] (12)
\------100------+
\----------------- XP_013609991.1 [Brassica oleracea] (44)
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