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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2236
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 124:
/-------------------------- 676731104 [Sisymbrium irio] (2)
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| /---------- XP_013639669.1 [Brassica oleracea] (6)
| |
| /-100+ /----- GSBRNA2T00024833001 [Brassica napus] (13)
/-100+ | \-100+
| | /-100-+ \----- XP_009118959.1 [Brassica rapa] (62)
| | | |
| | | \--------------- RrC9878_p1 [Raphanus raphanistrum] (12)
| | |
| \-96-+ /----- GSBRNA2T00153686001 [Brassica napus] (19)
| | /---100---+
| | | \----- XP_013625932.1 [Brassica oleracea] (47)
| | |
| \-100-+ /----- GSBRNA2T00112009001 [Brassica napus] (25)
| | /-100+
| | | \----- XP_009134718.1 [Brassica rapa] (68)
| \-56-+
| \---------- RrC5698_p2 [Raphanus raphanistrum] (48)
/-100+
| | /----- GSBRNA2T00076133001 [Brassica napus] (18)
| | /-100+
| | | \----- XP_009130326.1 [Brassica rapa] (30)
| | /-100+
| | | | /----- XP_013638778.1 [Brassica oleracea] (28)
| | | \-100+
| | /-100-+ \----- GSBRNA2T00041369001 [Brassica napus] (45)
| | | |
| | | | /----- RrC6452_p4 [Raphanus raphanistrum] (31)
| | /-100+ \---100---+
| | | | \----- Rsa1.0_00078.1_g00006.1 [Raphanus sativus] (55)
| | | |
| \-79-+ \--------------------- Tp3g02050 [Thellungiella parvula] (51)
/-100+ |
| | \-------------------------- Thhalv10020648m [Eutrema salsugineum] (22)
| |
| | /----- 477545 [Arabidopsis lyrata] (7)
| | /-100+
| | | \----- Araha.18846s0001.1.p [Arabidopsis halleri] (42)
| | /-100+
| | | \---------- AT3G02990.1 [Arabidopsis thaliana] (17)
| | |
| | /--51-+ /----- Carubv10013628m [Capsella rubella] (11)
/-100+ | | | /-100+
| | | | | | \----- Cagra.1194s0002.1.p [Capsella grandiflora] (32)
| | | | \-100+
| | \------100-----+ | /----- Csa19g005130.1 [Camelina sativa] (29)
| | | \-100+
| | | \----- Csa15g002700.1 [Camelina sativa] (33)
| | |
| | \--------------------- Bostr.19046s0011.1.p [Boechera stricta] (35)
| |
| \----------------------------------------- AA10G00315 [Aethionema arabicum] (24)
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| /----- Gh_A13G1357 [Gossypium hirsutum] (3)
| /-100+
| | \----- Cotton_A_23520_BGI-A2_v1.0 [Gossypium arboreum] (20)
| /------100------+
| | | /----- Gorai.013G183500.1 [Gossypium raimondii] (38)
| | \-100+
| | \----- Gh_D13G1666 [Gossypium hirsutum] (61)
| |
/-100-+ | /--------------- Thecc1EG025482t1 [Theobroma cacao] (10)
| | | |
| | /-100+ | /----- Cotton_A_02851_BGI-A2_v1.0 [Gossypium arboreum] (15)
| | | | /-100-+ /-100+
| | | | | | | \----- Gh_A02G1353 [Gossypium hirsutum] (67)
| | | | | \-100+
| | | | | | /----- Gh_D03G0493 [Gossypium hirsutum] (21)
| | | | | \-100+
| | | \-74-+ \----- Gorai.003G053300.1 [Gossypium raimondii] (57)
| | | |
| | /-88-+ | /----- Gh_A08G2299 [Gossypium hirsutum] (36)
| | | | | /-100+
| | | | | | \----- Cotton_A_05732_BGI-A2_v1.0 [Gossypium arboreum] (39)
/-100+ | | | \----100---+
| | | | | | /----- Gh_D08G2352 [Gossypium hirsutum] (40)
| | | /-100+ | \-98-+
| | | | | | \----- Gorai.004G257000.1 [Gossypium raimondii] (43)
| | | | | |
| | | | | \------------------------------- evm.model.supercontig_43.94 [Carica papaya] (49)
| | \-100+ |
| | | \------------------------------------ orange1.1g011077m [Citrus sinensis] (46)
| | |
| | | /----- XP_010549838.1 [Tarenaya hassleriana] (8)
| | \----------------100----------------+
| | \----- XP_010558628.1 [Tarenaya hassleriana] (26)
| |
| \---------------------------------------------------- AA40G00417 [Aethionema arabicum] (41)
/-82-+
| | /---------- Csa13g019650.1 [Camelina sativa] (5)
| | |
| | /-100+ /----- Csa08g009020.1 [Camelina sativa] (50)
| | | \-100+
| | | \----- Csa20g024750.1 [Camelina sativa] (56)
| | /-100-+
| | | | /----- Cagra.0434s0049.1.p [Capsella grandiflora] (65)
| | | \---100---+
| | /-100+ \----- Carubv10003259m [Capsella rubella] (71)
--100+ | | |
| | | \--------------------- Bostr.2618s0023.1.p [Boechera stricta] (23)
| | |
| \--------------100-------------+ /----- 488541 [Arabidopsis lyrata] (27)
| | /-100+
| | | \----- Araha.9878s0008.1.p [Arabidopsis halleri] (58)
| \------100------+
| \---------- AT5G16820.1 [Arabidopsis thaliana] (34)
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\-------------------------------------------------------------- Thhalv10013428m [Eutrema salsugineum] (52)
Root part of tree:
/------------------------------------------------------------------- XP_013606095.1 [Brassica oleracea] (1)
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|------------------------------------------------------------------- XP_013613166.1 [Brassica oleracea] (9)
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|------------------------------------------------------------------- XP_013614420.1 [Brassica oleracea] (37)
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| /--------------------------------- (124)
| |
| | /------- Rsa1.0_03408.1_g00002.1 [Raphanus sativus] (4)
| | /-----100----+
| | | \------- RrC6094_p3 [Raphanus raphanistrum] (44)
| /--100-+ |
| | | /--100-+ /------- GSBRNA2T00143186001 [Brassica napus] (16)
| | | | | /-100-+
| | | | | | \------- XP_009126142.1 [Brassica rapa] (63)
+ | | | \--100-+
| | \-100-+ | /------- XP_013621550.1 [Brassica oleracea] (53)
| /--100-+ | \-100-+
| | | | \------- GSBRNA2T00065352001 [Brassica napus] (66)
| | | |
| | | \--------------------------- Tp6g27310 [Thellungiella parvula] (54)
| /--100-+ |
| | | \---------------------------------------- 676789072 [Sisymbrium irio] (70)
| | |
| | | /------- Rsa1.0_00047.1_g00028.1 [Raphanus sativus] (14)
| /-100-+ \------------------100------------------+
| | | \------- RrC1881_p4 [Raphanus raphanistrum] (59)
| | |
| | | /------- XP_009121441.1 [Brassica rapa] (60)
\--100-+ \----------------------100---------------------+
| \------- GSBRNA2T00135387001 [Brassica napus] (69)
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\------------------------------------------------------------ GSBRNA2T00094912001 [Brassica napus] (64)
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