![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM2353
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 82:
/--------------------------------------------------------- evm.model.supercontig_17.155 [Carica papaya] (3)
|
| /---------- Csa01g022890.1 [Camelina sativa] (7)
| |
| /-99-+ /----- Csa15g027910.1 [Camelina sativa] (12)
| | \-98-+
| /--79-+ \----- Csa19g027580.1 [Camelina sativa] (43)
| | |
| /-97-+ \--------------- Bostr.19424s0675.1.p [Boechera stricta] (10)
| | |
| | \--------------------- Cagra.0316s0082.1.p [Capsella grandiflora] (29)
| |
| /-100+ /----- Araha.54322s0002.1.p [Arabidopsis halleri] (15)
| | |---------100--------+
| | | \----- 479503 [Arabidopsis lyrata] (48)
| /-100+ |
/-100+ | | \-------------------------- AT3G19860.2 [Arabidopsis thaliana] (35)
| | | |
| | /-100+ \------------------------------- AA26G00655 [Aethionema arabicum] (33)
| | | |
| | | \------------------------------------ Thhalv10021271m [Eutrema salsugineum] (38)
| | |
| | | /----- GSBRNA2T00054328001 [Brassica napus] (18)
| | | /-99-+
| | /-99-+ | \----- XP_013615991.1 [Brassica oleracea] (49)
| | | |--------------100-------------+
| | | | | /----- XP_009111465.1 [Brassica rapa] (37)
| | | | \-100+
| | /-100-+ | \----- GSBRNA2T00074427001 [Brassica napus] (44)
--89-+ | | | |
| | | | \----------------------------------------- Tp3g17880 [Thellungiella parvula] (31)
| \-100+ |
| | \---------------------------------------------- Thhalv10023630m [Eutrema salsugineum] (54)
| |
| \---------------------------------------------------- XP_010526564.1 [Tarenaya hassleriana] (56)
|
| /----- Ciclev10028782m [Citrus clementina] (20)
| /------100------+
| | \----- orange1.1g022288m [Citrus sinensis] (62)
| |
| | /----- Gh_D02G2226 [Gossypium hirsutum] (27)
| | /-91-+
\-------------------100------------------+ | \----- Gorai.005G252200.1 [Gossypium raimondii] (41)
| |
| /-100+---------- Gh_A03G1793 [Gossypium hirsutum] (30)
| | |
\-100-+ \---------- Cotton_A_00658_BGI-A2_v1.0 [Gossypium arboreum] (51)
|
\--------------- Thecc1EG006692t1 [Theobroma cacao] (42)
Root part of tree:
/------------------------------------------------------------------- evm.model.supercontig_6.255 [Carica papaya] (1)
|
| /----------- (82)
| |
|--------------------------100--------------------------+ /------ EcC041121.50 [Eucalyptus camaldulensis] (34)
| \-100+
| \------ Eucgr.G01757.1.p [Eucalyptus grandis] (58)
|
| /----------------- Thecc1EG000204t1 [Theobroma cacao] (4)
| |
| | /------ Cotton_A_01558_BGI-A2_v1.0 [Gossypium arboreum] (5)
| | /-100+
| | | \------ Gh_A02G1636 [Gossypium hirsutum] (45)
| |-100-+
| | | /------ Gh_D03G0086 [Gossypium hirsutum] (25)
| /-100+ \-100+
| | | \------ Gorai.003G009400.1 [Gossypium raimondii] (57)
| | |
| | | /------ Gh_A11G1614 [Gossypium hirsutum] (6)
| | | /-100+
| | | | \------ Cotton_A_19366_BGI-A2_v1.0 [Gossypium arboreum] (26)
|---------------------88---------------------+ \-100-+
| | | /------ Gh_D11G1773 [Gossypium hirsutum] (14)
| | \-80-+
| | \------ Gorai.007G194400.1 [Gossypium raimondii] (23)
| |
| \---------------------- Neem_4117_f_1 [Azadirachta indica] (16)
|
| /----------- Csa12g007340.1 [Camelina sativa] (2)
| |
| /-100-+ /------ Csa12g006310.1 [Camelina sativa] (32)
| | \-82-+
| | \------ Csa11g005630.1 [Camelina sativa] (60)
| /-76-+
| | | /------ Carubv10006934m [Capsella rubella] (9)
| | \----100---+
+ /-100-+ \------ Cagra.2236s0005.1.p [Capsella grandiflora] (36)
| | |
| | \---------------------- Bostr.7867s1468.1.p [Boechera stricta] (22)
| /-------100------+
| | | /----------- Araha.35519s0001.1.p [Arabidopsis halleri] (13)
| | | |
| | \-------100------+ /------ AT4G36060.1 [Arabidopsis thaliana] (40)
| | \-92-+
| | \------ 491027 [Arabidopsis lyrata] (59)
| |
| | /------ GSBRNA2T00086660001 [Brassica napus] (8)
| | /-100+
| | | \------ XP_009138406.1 [Brassica rapa] (24)
| | /-100-+
| | | | /------ XP_013596284.1 [Brassica oleracea] (21)
| | | \-100+
| | /-100+ \------ GSBRNA2T00100112001 [Brassica napus] (39)
| /-100+ | |
| | | | | /------ Rsa1.0_00269.1_g00028.1 [Raphanus sativus] (19)
| | | | \----100---+
| | | | \------ RrC16619_p1 [Raphanus raphanistrum] (28)
| | | /--97-+
| | | | | /------ GSBRNA2T00074199001 [Brassica napus] (46)
| | | | | /-100+
| | | | | | \------ XP_013594363.1 [Brassica oleracea] (52)
| | | /-97-+ \----100---+
| /-100-+ | | | \----------- XP_009147595.1 [Brassica rapa] (53)
| | | | | |
| | | | /--93-+ \---------------------------- Tp7g33840 [Thellungiella parvula] (50)
| | | | | |
| | | \--93-+ \--------------------------------- Thhalv10026039m [Eutrema salsugineum] (61)
| /-100+ | |
| | | | \--------------------------------------- KFK30238.1 [Arabis alpina] (17)
| | | |
| | | \-------------------------------------------------- AA30G00129 [Aethionema arabicum] (11)
\--51-+ |
| \-------------------------------------------------------- XP_010548277.1 [Tarenaya hassleriana] (47)
|
\------------------------------------------------------------- Eucgr.I02346.1.p [Eucalyptus grandis] (55)
|




