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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2380
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 124:
/----- 878662 [Arabidopsis lyrata] (6)
/-100+
| \----- Araha.5092s0013.1.p [Arabidopsis halleri] (25)
/------100------+
| \---------- AT1G04990.1 [Arabidopsis thaliana] (38)
|
| /---------- Csa14g006230.1 [Camelina sativa] (33)
| |
| /-100+ /----- Csa03g006320.1 [Camelina sativa] (42)
/-100+ | \-53-+
| | | \----- Csa17g008250.1 [Camelina sativa] (50)
| | /-100-+
| | | | /----- Cagra.1671s0119.1.p [Capsella grandiflora] (52)
| | | \---100---+
/-98-+ \-100+ \----- Carubv10009335m [Capsella rubella] (63)
| | |
| | \--------------------- Bostr.25219s0472.1.p [Boechera stricta] (49)
| |
| \------------------------------- KFK42845.1 [Arabis alpina] (62)
|
| /----- XP_013586676.1 [Brassica oleracea] (15)
| /-100+
| | \----- GSBRNA2T00002814001 [Brassica napus] (74)
| /-100+
/-100+ | | /----- GSBRNA2T00010620001 [Brassica napus] (17)
| | | \-100+
| | /-100-+ \----- XP_009119217.1 [Brassica rapa] (30)
| | | |
| | | | /----- Rsa1.0_04384.1_g00003.1 [Raphanus sativus] (23)
| | /-100+ \---100---+
| | | | \----- RrC6694_p4 [Raphanus raphanistrum] (71)
/------100------+ | | |
| | | /-100+ \--------------------- 676725582 [Sisymbrium irio] (64)
| | | | |
| | \-100+ \-------------------------- Tp1g03870 [Thellungiella parvula] (51)
| | |
| | \------------------------------- Thhalv10007912m [Eutrema salsugineum] (31)
| |
| \----------------------------------------- AA19G00049 [Aethionema arabicum] (43)
|
| /----- Neem_39691_f_1 [Azadirachta indica] (12)
| /-100+
| | \----- Neem_4792_f_1 [Azadirachta indica] (54)
| /-----------100-----------+
| | | /----- orange1.1g013033m [Citrus sinensis] (34)
| | \-100+
| | \----- Ciclev10015215m [Citrus clementina] (39)
| |
| | /----- Cotton_A_30489_BGI-A2_v1.0 [Gossypium arboreum] (22)
| | /-100+
| | | \----- Gh_A07G0778 [Gossypium hirsutum] (44)
| | /----100---+
| | | | /----- Gh_D07G0845 [Gossypium hirsutum] (46)
| | | \-100+
/-100+ | | \----- Gorai.001G097100.1 [Gossypium raimondii] (58)
| | /-92-+ |
| | | | /-100+ /----- Gh_D07G0843 [Gossypium hirsutum] (27)
| | | | | | /-100+
| | | | | | | \----- Gorai.001G096900.1 [Gossypium raimondii] (72)
| | | | | | /-100+
| | | | | | | \---------- Gh_A07G0777 [Gossypium hirsutum] (55)
| | | | | \-100-+
| | | | /-100+ \--------------- Cotton_A_30487_BGI-A2_v1.0 [Gossypium arboreum] (28)
| | | | | |
| | | | | | /----- Gh_A07G1537 [Gossypium hirsutum] (24)
| | /-92-+ | | | /-90-+
| | | | | | | | \----- Cotton_A_27029_BGI-A2_v1.0 [Gossypium arboreum] (67)
| | | | \-100+ \------100------+
| | | | | | /----- Gh_D07G1698 [Gossypium hirsutum] (69)
--100+ | | | | \-100+
| | | | | \----- Gorai.001G195600.1 [Gossypium raimondii] (70)
| | /-100-+ | |
| | | | | \------------------------------- Thecc1EG002195t1 [Theobroma cacao] (26)
| | | | |
| | | | \----------------------------------------- evm.model.supercontig_346.1 [Carica papaya] (37)
| | | |
| \-100+ \---------------------------------------------- XP_010532994.1 [Tarenaya hassleriana] (59)
| |
| | /----- XP_010522373.1 [Tarenaya hassleriana] (16)
| | /-100+
| | | \----- XP_010556971.1 [Tarenaya hassleriana] (32)
| \-------------------100-------------------+
| \---------- XP_010542997.1 [Tarenaya hassleriana] (35)
|
\-------------------------------------------------------------- AA32G00506 [Aethionema arabicum] (21)
Subtree rooted at node 144:
/----- Cagra.0301s0088.1.p [Capsella grandiflora] (2)
/---100---+
| \----- Carubv10023174m [Capsella rubella] (61)
|
/-100-+ /---------- Csa05g023660.1 [Camelina sativa] (9)
| | |
| \-100+ /----- Csa16g008420.1 [Camelina sativa] (10)
/-100+ \-100+
| | \----- Csa07g008630.1 [Camelina sativa] (29)
| |
| \--------------------- Bostr.23794s0805.1.p [Boechera stricta] (3)
/-100+
| | /---------- AT2G32930.2 [Arabidopsis thaliana] (14)
| | |
| \-------99------+ /----- 345050 [Arabidopsis lyrata] (48)
/-93-+ \-100+
| | \----- Araha.12821s0004.1.p [Arabidopsis halleri] (65)
| |
/-100+ \------------------------------- (124)
| |
/-99-+ \------------------------------------ KFK31098.1 [Arabis alpina] (45)
| |
/--74-+ \----------------------------------------- Thhalv10016979m [Eutrema salsugineum] (7)
| |
| \---------------------------------------------- Tp4g15290 [Thellungiella parvula] (60)
|
/-90-+ /--------------------- 676783642 [Sisymbrium irio] (8)
| | |
| | | /----- RrC82_p1 [Raphanus raphanistrum] (13)
| \--------------100-------------+ /---100---+
| | | \----- Rsa1.0_05995.1_g00001.1 [Raphanus sativus] (66)
| | |
| \-100-+ /----- XP_009143918.1 [Brassica rapa] (56)
| | /-100+
| | | \----- GSBRNA2T00007244001 [Brassica napus] (75)
| \-100+
/-100+ | /----- XP_013631061.1 [Brassica oleracea] (57)
| | \-100+
| | \----- GSBRNA2T00061146001 [Brassica napus] (68)
| |
| | /---------- RrC253_p2 [Raphanus raphanistrum] (5)
| | |
| | /-100+ /----- Rsa1.0_08643.1_g00001.1 [Raphanus sativus] (40)
| | | \-76-+
| | | \----- Rsa1.0_03401.1_g00005.1 [Raphanus sativus] (53)
| | |
--100+ \-------------------100-------------------+ /----- GSBRNA2T00132243001 [Brassica napus] (11)
| | /-100+
| | | \----- XP_013625934.1 [Brassica oleracea] (20)
| \-100+
| | /----- XP_009132897.1 [Brassica rapa] (41)
| \-100+
| \----- GSBRNA2T00141993001 [Brassica napus] (73)
|
| /----- RrC16853_p1 [Raphanus raphanistrum] (18)
\---------------------------100--------------------------+
\----- Rsa1.0_00616.1_g00003.1 [Raphanus sativus] (19)
Root part of tree:
/------------------------------------------------------------------- XP_013634191.1 [Brassica oleracea] (1)
|
|------------------------------------------------------------------- GSBRNA2T00024141001 [Brassica napus] (36)
+
| /--------------------------------------------- (144)
| |
\---------100---------+ /---------------------- XP_009141281.1 [Brassica rapa] (4)
\----------100---------+
\---------------------- GSBRNA2T00006460001 [Brassica napus] (47)
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