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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2403
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 118:
/----- XP_009135499.1 [Brassica rapa] (2)
/-100+
| \----- GSBRNA2T00137511001 [Brassica napus] (46)
/-100+
| | /----- GSBRNA2T00123894001 [Brassica napus] (57)
| \-100+
/------100------+ \----- XP_013630076.1 [Brassica oleracea] (63)
| |
| | /----- RrC1635_p1 [Raphanus raphanistrum] (60)
| \---100---+
| \----- Rsa1.0_04557.1_g00001.1 [Raphanus sativus] (68)
/-67-+
| | /-------------------------- 676773284 [Sisymbrium irio] (15)
| | |
| | | /--------------- XP_009146051.1 [Brassica rapa] (36)
| | | |
| \-93-+ /-100-+ /---------- GSBRNA2T00153791001 [Brassica napus] (45)
| | | | |
| | | \-52-+ /----- XP_013586644.1 [Brassica oleracea] (53)
/-88-+ | | \-100+
| | \-100+ \----- GSBRNA2T00101896001 [Brassica napus] (59)
| | |
| | | /----- RrC30637_p1 [Raphanus raphanistrum] (43)
| | \------100------+
/-100+ | \----- Rsa1.0_03188.1_g00004.1 [Raphanus sativus] (55)
| | |
| | \------------------------------------ Tp3g15100 [Thellungiella parvula] (23)
| |
| \----------------------------------------- Thhalv10020213m [Eutrema salsugineum] (31)
|
| /----- Carubv10013107m [Capsella rubella] (9)
| /---100---+
/--54-+ | \----- Cagra.5497s0018.1.p [Capsella grandiflora] (61)
| | |
| | /--96-+ /----- Csa19g023750.1 [Camelina sativa] (20)
| | | | /-83-+
| | | | | \----- Csa01g019530.1 [Camelina sativa] (32)
| | | \-100+
| | | \---------- Csa15g021770.1 [Camelina sativa] (39)
| | |
/-100+ \-----------100----------+ /----- 479152 [Arabidopsis lyrata] (12)
| | | /-100+
| | | | \----- Araha.21982s0001.1.p [Arabidopsis halleri] (33)
| | | /-94-+
| | | | \---------- AT3G16857.2 [Arabidopsis thaliana] (41)
/-100+ | \--55-+
| | | \--------------- Bostr.28625s0008.1.p [Boechera stricta] (62)
| | |
| | \---------------------------------------------------- KFK39028.1 [Arabis alpina] (13)
| |
| \--------------------------------------------------------- AA26G00379 [Aethionema arabicum] (14)
|
| /---------- Gh_A09G2069 [Gossypium hirsutum] (4)
| |
| /------100------+ /----- Gh_D09G2278 [Gossypium hirsutum] (28)
| | \-100+
| | \----- Gorai.006G259700.1 [Gossypium raimondii] (54)
| |
| | /----- Gorai.002G029200.1 [Gossypium raimondii] (7)
| | /-74-+
| | | \----- Gh_Sca005214G03 [Gossypium hirsutum] (26)
| /-100+ /-60-+
| | | | | /----- Cotton_A_17803_BGI-A2_v1.0 [Gossypium arboreum] (29)
| | | | \-100+
| | | /-100-+ \----- Gh_A01G0217 [Gossypium hirsutum] (42)
| | | | |
| | | | \--------------- Gorai.007G240900.1 [Gossypium raimondii] (19)
--100+ | | |
| | \-100+ /----- Gorai.011G196400.1 [Gossypium raimondii] (11)
| /-100+ | /-100+
| | | | | \----- Gh_D10G1750 [Gossypium hirsutum] (40)
| | | \----100---+
| | | | /----- Gh_A10G1504 [Gossypium hirsutum] (27)
| | | \-100+
| | | \----- Cotton_A_19860_BGI-A2_v1.0 [Gossypium arboreum] (64)
| | |
| | \------------------------------- Thecc1EG021300t1 [Theobroma cacao] (18)
| /-99-+
| | | /----- Neem_30614_f_1 [Azadirachta indica] (8)
| | | /---100---+
| | | | \----- Neem_495_f_2 [Azadirachta indica] (17)
| | | |
| | | /-100-+ /----- orange1.1g027234m [Citrus sinensis] (47)
| | | | | /-84-+
| /-100+ | | | | \----- Ciclev10004989m [Citrus clementina] (72)
| | | \------99------+ \-100+
| | | | \---------- Ciclev10004470m [Citrus clementina] (71)
| | | |
\------100------+ | \--------------------- Eucgr.A00189.1.p [Eucalyptus grandis] (10)
| |
| \----------------------------------------- evm.model.supercontig_9.105 [Carica papaya] (24)
|
\---------------------------------------------- XP_010548968.1 [Tarenaya hassleriana] (16)
Root part of tree:
/------------------------------------------------------------------- Csa10g029760.1 [Camelina sativa] (1)
|
| /------------ (118)
| |
| /----100----+ /------ AA18G00178 [Aethionema arabicum] (44)
| | \-100-+
| | \------ AA18G00181 [Aethionema arabicum] (56)
| |
| | /------ XP_009136740.1 [Brassica rapa] (5)
| /-----------59-----------+ /-100-+
| | | | \------ GSBRNA2T00151176001 [Brassica napus] (50)
| | | /-100-+
| | | | | /------ GSBRNA2T00031391001 [Brassica napus] (30)
| | | | \-100-+
| | \-100-+ \------ XP_013598455.1 [Brassica oleracea] (69)
| | |
| | \------------------ Rsa1.0_04220.1_g00001.1 [Raphanus sativus] (38)
| |
| | /------ Rsa1.0_00077.1_g00002.1 [Raphanus sativus] (3)
| | /----100----+
| | | \------ RrC1971_p1 [Raphanus raphanistrum] (35)
| | |
| /-100-+ /-100-+ /------ GSBRNA2T00056495001 [Brassica napus] (6)
| | | | | /-100-+
| | | | | | \------ XP_013601580.1 [Brassica oleracea] (34)
| | | | \-100-+
+ | | /--61-+ | /------ XP_009146503.1 [Brassica rapa] (22)
| | | | | \-100-+
| | | | | \------ GSBRNA2T00051639001 [Brassica napus] (48)
| | | /--61--+ |
| | | | | \------------------------ 676739220 [Sisymbrium irio] (21)
| | | | |
| /--94-+ | /--59-+ \------------------------------ Tp7g14570 [Thellungiella parvula] (49)
| | | | | |
| | | \--59-+ \------------------------------------- Thhalv10024686m [Eutrema salsugineum] (58)
| | | |
| | | \------------------------------------------- KFK27554.1 [Arabis alpina] (73)
| | |
| | | /------ Araha.3152s0007.1.p [Arabidopsis halleri] (66)
|-100-+ | /-100-+
| | | | \------ 915160 [Arabidopsis lyrata] (70)
| | \--------------------100-------------------+
| | \------------ AT4G16110.1 [Arabidopsis thaliana] (67)
| |
| | /------------ Bostr.30275s0051.1.p [Boechera stricta] (37)
| | |
| \-----------------------73-----------------------+ /------ Carubv10007581m [Capsella rubella] (51)
| \-100-+
| \------ Cagra.0053s0018.1.p [Capsella grandiflora] (65)
|
| /------ Csa12g053330.1 [Camelina sativa] (25)
\-----------------------------96-----------------------------+
\------ Csa11g034020.1 [Camelina sativa] (52)
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