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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2416
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 135:
/----- GSBRNA2T00146022001 [Brassica napus] (3)
/-100+
| \----- XP_013612936.1 [Brassica oleracea] (5)
/-100+
| | /----- GSBRNA2T00009589001 [Brassica napus] (60)
| \-100+
/-100-+ \----- XP_009111638.1 [Brassica rapa] (65)
| |
| \--------------- RrC3907_p2 [Raphanus raphanistrum] (18)
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/-100+ /----- RrC89_p4 [Raphanus raphanistrum] (10)
| | /---100---+
| | | \----- Rsa1.0_00964.1_g00011.1 [Raphanus sativus] (63)
| | |
| \-100-+ /----- GSBRNA2T00133539001 [Brassica napus] (55)
| | /-100+
/-100+ | | \----- XP_013598464.1 [Brassica oleracea] (73)
| | \-100+
| | | /----- GSBRNA2T00147549001 [Brassica napus] (71)
| | \-100+
/-100+ | \----- XP_009150982.1 [Brassica rapa] (72)
| | |
| | \-------------------------- 676747066 [Sisymbrium irio] (59)
/-100+ |
| | \------------------------------- Tp2g22790 [Thellungiella parvula] (20)
| |
| \------------------------------------ Thhalv10004105m [Eutrema salsugineum] (14)
|
| /--------------------- Bostr.5763s0059.1.p [Boechera stricta] (4)
| |
| | /----- Csa20g042750.1 [Camelina sativa] (15)
| | /-100+
| /-100+ | \----- Csa13g030320.1 [Camelina sativa] (44)
/----100---+ | | /-100+
| | | | | \---------- Csa08g020160.1 [Camelina sativa] (47)
| | | \--87-+
| | | | /----- Cagra.21346s0001.1.p [Capsella grandiflora] (25)
| | | \---100---+
| | /-100+ \----- Carubv10000892m [Capsella rubella] (27)
| | | |
| | | | /----- 326748 [Arabidopsis lyrata] (23)
| | | | /-100+
| \---100---+ | | \----- Araha.1212s0002.1.p [Arabidopsis halleri] (28)
| | \------100------+
| | \---------- AT5G24590.2 [Arabidopsis thaliana] (41)
| |
| \------------------------------- KFK27735.1 [Arabis alpina] (56)
|
| /----- Rsa1.0_02586.1_g00002.1 [Raphanus sativus] (7)
| /---100---+
| | \----- RrC40_p2 [Raphanus raphanistrum] (35)
| |
| /------100------+ /----- XP_013622434.1 [Brassica oleracea] (19)
| | | /-100+
| | | | \----- GSBRNA2T00145796001 [Brassica napus] (48)
| | \-96-+
| | | /----- XP_009150140.1 [Brassica rapa] (22)
| | \-100+
| | \----- GSBRNA2T00109745001 [Brassica napus] (36)
| |
| | /----- Rsa1.0_15187.1_g00002.1 [Raphanus sativus] (12)
| | /---100---+
/-77-+ /-100+ | \----- RrC654_p6 [Raphanus raphanistrum] (33)
| | | | |
| | | | /-100-+ /----- GSBRNA2T00125430001 [Brassica napus] (16)
| | | | | | /-100+
| | | | | | | \----- XP_009149732.1 [Brassica rapa] (66)
| | | | | \-100+
| | | | /-100+ | /----- GSBRNA2T00121760001 [Brassica napus] (53)
| | /-100+ | | | \-100+
| | | | | | | \----- XP_013605626.1 [Brassica oleracea] (69)
| | | | \-57-+ |
| | | | | \--------------------- 676757664 [Sisymbrium irio] (58)
| | | | |
| | | | \-------------------------- Tp5g12580 [Thellungiella parvula] (64)
| | | |
| | | \------------------------------------ Thhalv10010340m [Eutrema salsugineum] (29)
| | |
| | | /----- Cagra.1838s0033.1.p [Capsella grandiflora] (13)
| | | /---100---+
| | | | \----- Carubv10017199m [Capsella rubella] (67)
| | /-100+ |
/-100+ | | | /-100-+ /----- Csa04g035000.1 [Camelina sativa] (21)
| | | | | | | /-100+
| | | | | | | | \----- Csa09g052140.1 [Camelina sativa] (50)
| | | | | /-100+ \-100+
| | | | | | | \---------- Csa06g023540.1 [Camelina sativa] (52)
| | | | | | |
| | | | | | \--------------------- Bostr.6864s0295.1.p [Boechera stricta] (61)
| | | | | /-100+
| | \-100-+ | | | /---------- AT3G49530.1 [Arabidopsis thaliana] (32)
| | | | | | |
| | | | | \------100------+ /----- 906244 [Arabidopsis lyrata] (46)
--100+ | | \----92---+ \-100+
| | | | \----- Araha.16094s0001.1.p [Arabidopsis halleri] (68)
| | | |
| | | \------------------------------- KFK34231.1 [Arabis alpina] (49)
| | |
| | \---------------------------------------------- AA13G00126 [Aethionema arabicum] (39)
| |
| | /----- XP_010519577.1 [Tarenaya hassleriana] (17)
| \------------------------100------------------------+
| \----- XP_010525539.1 [Tarenaya hassleriana] (51)
|
\-------------------------------------------------------------- evm.model.supercontig_3.170 [Carica papaya] (37)
Root part of tree:
/------------------------------------------------------------------- Thecc1EG015535t1 [Theobroma cacao] (1)
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| /----------- Cotton_A_02366_BGI-A2_v1.0 [Gossypium arboreum] (6)
| /----90----+
| | \----------- Gh_A11G0147 [Gossypium hirsutum] (62)
| /----59----+
| | | /----------- Gorai.007G017500.1 [Gossypium raimondii] (8)
| | \----100---+
| /----100----+ \----------- Gh_D11G0160 [Gossypium hirsutum] (45)
| | |
| | \--------------------------------- Cotton_A_02365_BGI-A2_v1.0 [Gossypium arboreum] (30)
| |
|----------69---------+ /----------- Gh_A08G0932 [Gossypium hirsutum] (24)
| | /----100---+
| | | \----------- Cotton_A_33555_BGI-A2_v1.0 [Gossypium arboreum] (70)
+ \----------100---------+
| | /----------- Gorai.004G125900.1 [Gossypium raimondii] (42)
| \----99----+
| \----------- Gh_D08G1138 [Gossypium hirsutum] (43)
|
| /----------- Gh_A09G1677 [Gossypium hirsutum] (2)
| /----100---+
| | \----------- Cotton_A_08115_BGI-A2_v1.0 [Gossypium arboreum] (34)
| /---------------100---------------+
| | | /----------- Gh_D09G1773 [Gossypium hirsutum] (38)
| | \----100---+
| | \----------- Gorai.006G203800.1 [Gossypium raimondii] (57)
| |
| | /--------------------------------- (135)
\----68----+ |
| | /----------- Ciclev10019368m [Citrus clementina] (11)
| /-----89----+ /----100---+
| | | | \----------- orange1.1g007393m [Citrus sinensis] (26)
| | \----100---+
| | | /----------- Neem_21394_f_3 [Azadirachta indica] (31)
\----100---+ \----100---+
| \----------- Neem_11713_f_2 [Azadirachta indica] (54)
|
| /----------- EcC002598.10 [Eucalyptus camaldulensis] (9)
\---------------100---------------+
\----------- Eucgr.A00969.1.p [Eucalyptus grandis] (40)
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