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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2498
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 136:
/----- Cagra.0050s0032.1.p [Capsella grandiflora] (3)
/-100+
| \----- Carubv10023896m [Capsella rubella] (60)
/-66-+
| \---------- Bostr.25993s0098.1.p [Boechera stricta] (48)
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/-100-+ /----- Csa05g002480.1 [Camelina sativa] (4)
| | /-99-+
| | | \----- Csa04g065790.1 [Camelina sativa] (42)
| \-100+
| \---------- Csa06g053190.1 [Camelina sativa] (68)
|
/---------98--------+ /----- 904139 [Arabidopsis lyrata] (27)
| | /-100+
| | | \----- 904137 [Arabidopsis lyrata] (66)
| | /-100+
| | | \---------- Araha.3284s0009.1.p [Arabidopsis halleri] (61)
| \-100-+
| \--------------- AT2G46680.1 [Arabidopsis thaliana] (55)
|
| /-------------------------- 676734764 [Sisymbrium irio] (6)
| |
| | /--------------- GSBRNA2T00073178001 [Brassica napus] (10)
| | |
| /-100+ /-100-+ /---------- XP_013631726.1 [Brassica oleracea] (20)
| | | | | |
/-97-+ | | | \-97-+ /----- GSBRNA2T00132920001 [Brassica napus] (30)
| | | | | \-100+
| | | \-100+ \----- XP_009142615.1 [Brassica rapa] (46)
| | | |
| | | | /----- Rsa1.0_00315.1_g00008.1 [Raphanus sativus] (34)
| | /-100+ \------100------+
| | | | \----- RrC14295_p1 [Raphanus raphanistrum] (58)
| | | |
| | | | /--------------------- Tp4g28720 [Thellungiella parvula] (13)
| | | | |
| | | | | /----- Rsa1.0_00853.1_g00002.1 [Raphanus sativus] (36)
/-100-+ | | \---100---+ /---100---+
| | | | | | \----- RrC14541_p1 [Raphanus raphanistrum] (74)
| | \-88-+ | |
| | | \--99-+ /----- XP_013633906.1 [Brassica oleracea] (64)
| | | | /-100+
| | | | | \----- GSBRNA2T00037243001 [Brassica napus] (67)
| | | \-100+
/-100+ | | \---------- XP_009142436.1 [Brassica rapa] (65)
| | | |
| | | \------------------------------------ Thhalv10001600m [Eutrema salsugineum] (18)
| | |
| | \---------------------------------------------- KFK37424.1 [Arabis alpina] (37)
| |
| \---------------------------------------------------- AA21G00398 [Aethionema arabicum] (7)
|
| /----- Rsa1.0_01748.1_g00004.1 [Raphanus sativus] (5)
| /---100---+
| | \----- RrC4816_p1 [Raphanus raphanistrum] (40)
| |
| /-100-+ /----- XP_013631796.1 [Brassica oleracea] (15)
| | | /-100+
| | | | \----- GSBRNA2T00016893001 [Brassica napus] (45)
| | \-100+
| /-88-+ | /----- XP_009138744.1 [Brassica rapa] (31)
| | | \-94-+
| | | \----- GSBRNA2T00149282001 [Brassica napus] (50)
| | |
| | \--------------------- Tp5g01460 [Thellungiella parvula] (47)
| |
| | /----- Rsa1.0_02677.1_g00005.1 [Raphanus sativus] (12)
| /-96-+ /---100---+
| | | | \----- RrC6305_p1 [Raphanus raphanistrum] (69)
/-100+ | | |
| | | | /-100-+ /----- XP_009116857.1 [Brassica rapa] (43)
| | | | | | /-100+
| | | | | | | \----- GSBRNA2T00022771001 [Brassica napus] (51)
| | | | | \-89-+
| | /-96-+ \-100+ | /----- XP_013602049.1 [Brassica oleracea] (44)
| | | | | \-100+
| | | | | \----- GSBRNA2T00127041001 [Brassica napus] (72)
| | | | |
| | | | \--------------------- 676749196 [Sisymbrium irio] (22)
| | | |
| | | | /----- KFK35376.1 [Arabis alpina] (41)
| | | \------------86-----------+
| | | \----- Thhalv10006221m [Eutrema salsugineum] (57)
| | |
| | | /---------- Csa05g094080.1 [Camelina sativa] (9)
| | /-100+ |
| | | | /-100+ /----- Csa16g002770.1 [Camelina sativa] (23)
--100+ | | | | \-61-+
| | | | | \----- Csa07g002710.1 [Camelina sativa] (59)
| | | | /--68-+
| | | | | | /----- Cagra.0483s0055.1.p [Capsella grandiflora] (21)
| | | | | \---100---+
| | | | /-100+ \----- Carubv10017952m [Capsella rubella] (49)
| | | | | |
| \------100------+ | | \--------------------- Bostr.13158s0194.1.p [Boechera stricta] (63)
| | | |
| | \----99---+ /----- 486694 [Arabidopsis lyrata] (29)
| | | /-95-+
| | | | \----- Araha.7206s0001.1.p [Arabidopsis halleri] (33)
| | \------100------+
| | \---------- AT3G61890.1 [Arabidopsis thaliana] (53)
| |
| \----------------------------------------- AA61G00546 [Aethionema arabicum] (62)
|
| /----- XP_010544870.1 [Tarenaya hassleriana] (8)
\---------------------------100--------------------------+
\----- XP_010559143.1 [Tarenaya hassleriana] (25)
Root part of tree:
/------------------------------------------------------------------- Ciclev10021877m [Citrus clementina] (1)
|
|------------------------------------------------------------------- orange1.1g025886m [Citrus sinensis] (26)
|
| /----------------- Cotton_A_25888_BGI-A2_v1.0 [Gossypium arboreum] (2)
| |
| |----------------- Gh_A12G1033 [Gossypium hirsutum] (32)
| /-----------100----------+
| | | /-------- Gorai.008G128000.1 [Gossypium raimondii] (52)
| | \---99---+
| | \-------- Gh_D12G1152 [Gossypium hirsutum] (54)
| |
| | /----------------- Cotton_A_32300_BGI-A2_v1.0 [Gossypium arboreum] (11)
| | |
| | | /-------- Gh_D07G1346 [Gossypium hirsutum] (14)
| | /--100--+---100--+
+ /--100--+ | | \-------- Gorai.001G152200.1 [Gossypium raimondii] (24)
| | | | |
| | | | \----------------- Gh_A07G1237 [Gossypium hirsutum] (39)
| | | /---52--+
| | | | | /-------- Gh_D11G1052 [Gossypium hirsutum] (17)
| | | | | /---74---+
| | | | | | \-------- Gorai.007G111400.1 [Gossypium raimondii] (56)
| | | | \--100--+
| | \---59---+ | /-------- Cotton_A_35320_BGI-A2_v1.0 [Gossypium arboreum] (28)
| /---100--+ | \---71---+
| | | | \-------- Gh_A11G0906 [Gossypium hirsutum] (38)
| | | |
| | | \--------------------------------- Thecc1EG005074t1 [Theobroma cacao] (71)
| | |
| | | /------------------------- (136)
| | | |
\--100--+ | | /-------- EcC002932.10 [Eucalyptus camaldulensis] (16)
| \-----------92-----------+ /---100--+
| | | \-------- Eucgr.D02645.1.p [Eucalyptus grandis] (19)
| \---88--+
| \----------------- evm.model.supercontig_144.7 [Carica papaya] (73)
|
| /-------- Neem_28142_f_1 [Azadirachta indica] (35)
\------------------------100-----------------------+
\-------- Neem_1623_f_1 [Azadirachta indica] (70)
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