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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2502
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 115:
/----- GSBRNA2T00148774001 [Brassica napus] (2)
/-100+
| \----- XP_009131973.1 [Brassica rapa] (49)
/-97-+
| \---------- XP_013625450.1 [Brassica oleracea] (65)
/-100-+
| \--------------- GSBRNA2T00141026001 [Brassica napus] (13)
|
/----87---+ /---------- Rsa1.0_03605.1_g00001.1 [Raphanus sativus] (3)
| | |
| \----87----+ /----- Rsa1.0_23355.1_g00001.1 [Raphanus sativus] (27)
| \-80-+
| \----- RrC1338_p3 [Raphanus raphanistrum] (53)
|
| /----- Csa02g065530.1 [Camelina sativa] (5)
| |
| /-97-+----- Csa18g033070.1 [Camelina sativa] (9)
| | |
| | \----- Csa11g093630.1 [Camelina sativa] (58)
| |
| /-99-+ /----- Carubv10027237m [Capsella rubella] (16)
| | |-100+
| | | \----- Cagra.1317s0038.1.p [Capsella grandiflora] (39)
| /--92-+ |
| | | \---------- Bostr.26833s0259.1.p [Boechera stricta] (45)
| | |
| /-87-+ \--------------- Araha.2561s0012.1.p [Arabidopsis halleri] (46)
| | |
| | \--------------------- KFK27514.1 [Arabis alpina] (57)
| |
|-67-+ /----- XP_013618692.1 [Brassica oleracea] (44)
| | /-100+
| | | \----- GSBRNA2T00083899001 [Brassica napus] (52)
| \------100------+
| \---------- XP_009126663.1 [Brassica rapa] (67)
/-86-+
| | /----- RrC752_p1 [Raphanus raphanistrum] (14)
| | /-100+
| | | \----- Rsa1.0_02443.1_g00005.1 [Raphanus sativus] (40)
| |---------78---------+
| | \---------- GSBRNA2T00096313001 [Brassica napus] (15)
| |
| | /----- RrC14137_p1 [Raphanus raphanistrum] (22)
| | /----84---+
| | | \----- Rsa1.0_01880.1_g00001.1 [Raphanus sativus] (50)
| | |
| |-------84------+ /---------- XP_009120496.1 [Brassica rapa] (25)
| | | |
| | | | /----- GSBRNA2T00133193001 [Brassica napus] (28)
| | \-100+-100+
/-------53------+ | | \----- XP_013609101.1 [Brassica oleracea] (55)
| | | |
| | | \---------- GSBRNA2T00093311001 [Brassica napus] (41)
| | |
| | |------------------------------- Tp6g21450 [Thellungiella parvula] (33)
| | |
| | | /----- AT5G59780.3 [Arabidopsis thaliana] (34)
| | |------------96-----------+
| | | \----- 496112 [Arabidopsis lyrata] (35)
| | |
| | |------------------------------- Thhalv10014524m [Eutrema salsugineum] (47)
| | |
| | \------------------------------- 676719472 [Sisymbrium irio] (72)
| |
| \------------------------------------ AA97G00029 [Aethionema arabicum] (18)
|
| /----- XP_009149988.1 [Brassica rapa] (10)
| /-99-+
| | \----- GSBRNA2T00143990001 [Brassica napus] (64)
| /-100+
| | \---------- GSBRNA2T00107281001 [Brassica napus] (63)
| |
| /-100-+--------------- XP_013625304.1 [Brassica oleracea] (12)
| | |
| | \--------------- GSBRNA2T00143989001 [Brassica napus] (38)
/-99-+ /-100+
| | | | /----- RrC6879_p1 [Raphanus raphanistrum] (29)
| | | \------100------+
| | /-100+ \----- Rsa1.0_01743.1_g00007.1 [Raphanus sativus] (59)
| | | |
| | | \-------------------------- 676792848 [Sisymbrium irio] (43)
| | /-88-+
| | | |------------------------------- KFK33967.1 [Arabis alpina] (48)
| | | |
| | | \------------------------------- Thhalv10002648m [Eutrema salsugineum] (68)
| | |
| | | /----- Carubv10017875m [Capsella rubella] (17)
| | /-79-+ /---100---+
| | | | | \----- Cagra.10637s0001.1.p [Capsella grandiflora] (31)
| | | | |
| | | | |--------------- 347705 [Arabidopsis lyrata] (20)
/-100+ | | | |
| | | | | | /----- Csa09g041200.1 [Camelina sativa] (36)
| | | | \---------100--------+ /-100+
| | | | | | \----- Csa06g019850.1 [Camelina sativa] (54)
| | | /-100+ |-96-+
| | | | | | \---------- Csa04g028830.1 [Camelina sativa] (60)
| | | | | |
| | | | | | /----- Bostr.18473s0331.1.p [Boechera stricta] (42)
| | | | | \----64---+
| | \-100-+ | \----- AT3G46130.1 [Arabidopsis thaliana] (70)
--69-+ | | |
| | | \----------------------------------------- Tp5g15520 [Thellungiella parvula] (51)
| | |
| | \---------------------------------------------- AA16G00066 [Aethionema arabicum] (61)
| |
| | /----- XP_010541387.1 [Tarenaya hassleriana] (6)
| \------------------------100------------------------+
| \----- XP_010535526.1 [Tarenaya hassleriana] (66)
|
\-------------------------------------------------------------- evm.model.supercontig_190.35 [Carica papaya] (73)
Root part of tree:
/------------------------------------------------------------------- Gh_D07G0941 [Gossypium hirsutum] (1)
|
|------------------------------------------------------------------- Gorai.001G107900.1 [Gossypium raimondii] (30)
|
| /--------------------------- (115)
| |
| | /------------- Eucgr.J02073.1.p [Eucalyptus grandis] (4)
| /--69-+ |
| | | /--100-+ /------- orange1.1g023677m [Citrus sinensis] (11)
| | | | \-100-+
| | \--95--+ \------- Ciclev10029019m [Citrus clementina] (56)
| /--93--+ |
| | | \-------------------- Eucgr.B02401.1.p [Eucalyptus grandis] (32)
| | |
| /--92--+ \--------------------------------- Neem_4729_f_9 [Azadirachta indica] (37)
+ | |
| | \---------------------------------------- Thecc1EG041904t1 [Theobroma cacao] (19)
| |
| | /------- Gorai.003G136400.1 [Gossypium raimondii] (7)
| /--91--+ /--91-+
| | | | \------- Gh_D03G1250 [Gossypium hirsutum] (8)
| | | /--98--+
| | | | \------------- Gh_A03G0327 [Gossypium hirsutum] (71)
| | \------------100-----------+
| /-100-+ \-------------------- Cotton_A_02240_BGI-A2_v1.0 [Gossypium arboreum] (24)
| | |
| | | /------- Cotton_A_10538_BGI-A2_v1.0 [Gossypium arboreum] (21)
| | | /--91-+
| | | | \------- Gh_A13G1994 [Gossypium hirsutum] (23)
| | \-------------------100------------------+
\--100-+ | /------- Gorai.013G265300.1 [Gossypium raimondii] (26)
| \--99-+
| \------- Gh_D13G2393 [Gossypium hirsutum] (69)
|
| /------- Gh_A07G0870 [Gossypium hirsutum] (62)
\-------------------------100------------------------+
\------- Cotton_A_24653_BGI-A2_v1.0 [Gossypium arboreum] (74)
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