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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2528
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 130:
/----- GSBRNA2T00132911001 [Brassica napus] (2)
/-98-+
| \----- XP_009142625.1 [Brassica rapa] (32)
/-100+
| | /----- GSBRNA2T00073166001 [Brassica napus] (10)
| \-100+
/-100-+ \----- XP_013633551.1 [Brassica oleracea] (60)
| |
| | /----- Rsa1.0_00315.1_g00001.1 [Raphanus sativus] (46)
| \---100---+
| \----- RrC1294_p4 [Raphanus raphanistrum] (68)
/-89-+
| | /----- Rsa1.0_01195.1_g00006.1 [Raphanus sativus] (8)
| | /---100---+
| | | \----- RrC7141_p3 [Raphanus raphanistrum] (54)
| | |
| \-100-+ /----- GSBRNA2T00101602001 [Brassica napus] (47)
| | /-100+
/-81-+ | | \----- XP_013621963.1 [Brassica oleracea] (62)
| | \-100+
| | | /----- GSBRNA2T00138920001 [Brassica napus] (52)
| | \-100+
| | \----- XP_009133785.1 [Brassica rapa] (61)
| |
| | /----- Tp4g28640 [Thellungiella parvula] (53)
/-72-+ \---------86---------+
| | \----- 676734746 [Sisymbrium irio] (65)
| |
| | /--------------------- Thhalv10001503m [Eutrema salsugineum] (24)
| | |
| | | /----- RrC14503_p1 [Raphanus raphanistrum] (25)
| \----61---+ /---100---+
| | | \----- Rsa1.0_00853.1_g00007.1 [Raphanus sativus] (44)
| | |
| \-100-+ /----- XP_009142429.1 [Brassica rapa] (26)
| | /-90-+
| | | \----- GSBRNA2T00034274001 [Brassica napus] (40)
| \-100+
| | /----- XP_013631610.1 [Brassica oleracea] (41)
| \-99-+
| \----- GSBRNA2T00037250001 [Brassica napus] (67)
|
/-74-+ /----- Carubv10023459m [Capsella rubella] (3)
| | /------100------+
| | | \----- Cagra.0050s0039.1.p [Capsella grandiflora] (73)
| | |
| | | /----- Csa06g053110.1 [Camelina sativa] (9)
| | | |
| |------100-----+ /-100+----- Csa04g065700.1 [Camelina sativa] (14)
| | | | |
| | | /-100+ \----- Csa14039s010.1 [Camelina sativa] (34)
| | | | |
/----100---+ | \--96-+ \---------- Csa05g002560.1 [Camelina sativa] (56)
| | | |
| | | \--------------- Bostr.25993s0106.1.p [Boechera stricta] (23)
| | |
| | | /---------- AT2G46590.2 [Arabidopsis thaliana] (16)
| | | |
| | \-----------100-----------+ /----- 904128 [Arabidopsis lyrata] (17)
| | \-100+
| | \----- Araha.3284s0019.1.p [Arabidopsis halleri] (70)
| |
| \----------------------------------------- AA21G00391 [Aethionema arabicum] (15)
|
| /----- XP_009138746.1 [Brassica rapa] (4)
| /-98-+
| | \----- GSBRNA2T00149279001 [Brassica napus] (13)
| |
| | /----- XP_013633958.1 [Brassica oleracea] (43)
| /-100+-100+
| | | \----- GSBRNA2T00042445001 [Brassica napus] (63)
| | |
| /-100-+ \---------- GSBRNA2T00145503001 [Brassica napus] (58)
| | |
| | | /----- RrC22928_p1 [Raphanus raphanistrum] (50)
| /-100+ \---100---+
| | | \----- Rsa1.0_02796.1_g00003.1 [Raphanus sativus] (71)
| | |
| /-99-+ \--------------------- Tp5g01520 [Thellungiella parvula] (38)
| | |
| | \-------------------------- Thhalv10006092m [Eutrema salsugineum] (66)
| |
| | /----- GSBRNA2T00155389001 [Brassica napus] (7)
| | /-100+
/-100+ | | \----- XP_013604929.1 [Brassica oleracea] (28)
| | /-97-+ /-85-+
| | | | | | /----- XP_009116848.1 [Brassica rapa] (29)
| | | | | \-100+
| | | | /-100-+ \----- GSBRNA2T00022778001 [Brassica napus] (51)
| | | | | |
| | | | | | /----- RrC9253_p1 [Raphanus raphanistrum] (42)
| | | \---100---+ \---100---+
| | | | \----- Rsa1.0_02749.1_g00002.1 [Raphanus sativus] (64)
| | | |
| | | \--------------------- 676749184 [Sisymbrium irio] (20)
| | |
| | | /----- Carubv10017642m [Capsella rubella] (18)
| | | /---100---+
| | | | \----- Cagra.0483s0060.1.p [Capsella grandiflora] (72)
| | | |
| | /-100+ /--51-+ /----- Csa16g003010.1 [Camelina sativa] (19)
| | | | | | /-72-+
| | | | | | | \----- Csa05g094020.1 [Camelina sativa] (49)
| | | |------51------+ \-64-+
/-100+ | | | | \---------- Csa07g002770.1 [Camelina sativa] (21)
| | | | | |
| | | | | \--------------------- Csa20g076140.1 [Camelina sativa] (69)
| | | | |
| | | /-100+ | /----- 486687 [Arabidopsis lyrata] (36)
| | | | | | /-100+
| | | | | | | \----- Araha.7206s0005.1.p [Arabidopsis halleri] (59)
| | | | | |------------93-----------+
| | | | | | \---------- AT3G61850.4 [Arabidopsis thaliana] (48)
| | | | | |
| | | | | \------------------------------------ Bostr.13158s0188.1.p [Boechera stricta] (45)
--82-+ | \--75-+ |
| | | \----------------------------------------- AA61G00535 [Aethionema arabicum] (57)
| | |
| | | /----- XP_010523822.1 [Tarenaya hassleriana] (11)
| | | /-100+
| | | | \----- XP_010544859.1 [Tarenaya hassleriana] (39)
| | \----------------100----------------+
| | \---------- XP_010559137.1 [Tarenaya hassleriana] (31)
| |
| \--------------------------------------------------------- Eucgr.E00037.1.p [Eucalyptus grandis] (22)
|
\-------------------------------------------------------------- evm.model.supercontig_96.59 [Carica papaya] (30)
Root part of tree:
/------------------------------------------------------------------- Gorai.001G153300.1 [Gossypium raimondii] (1)
|
|------------------------------------------------------------------- Gh_D07G1357 [Gossypium hirsutum] (6)
|
| /---------------------------------------- (130)
| |
| | /------------- orange1.1g021641m [Citrus sinensis] (5)
| /-----100-----+ /-----100-----+
| | | | \------------- Ciclev10020725m [Citrus clementina] (33)
+ | \-----100----+
| | | /------------- Neem_28790_f_1 [Azadirachta indica] (12)
|-----100----+ \-----100-----+
| | \------------- Neem_2388_f_2 [Azadirachta indica] (37)
| |
| \------------------------------------------------------ Thecc1EG005109t3 [Theobroma cacao] (35)
|
| /------------- Cotton_A_32288_BGI-A2_v1.0 [Gossypium arboreum] (27)
\--------------------------96-------------------------+
\------------- Gh_A07G1251 [Gossypium hirsutum] (55)
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