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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM2576
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 128:
/----- XP_009104076.1 [Brassica rapa] (3)
/-100+
| \----- GSBRNA2T00098895001 [Brassica napus] (57)
/-100+
| | /----- XP_013588353.1 [Brassica oleracea] (39)
| \-100+
/-100-+ \----- GSBRNA2T00105760001 [Brassica napus] (41)
| |
| | /----- Rsa1.0_08919.1_g00002.1 [Raphanus sativus] (47)
| \---100---+
| \----- RrC5379_p3 [Raphanus raphanistrum] (65)
|
/-77-+ /----- GSBRNA2T00087898001 [Brassica napus] (8)
| | /-100+
| | | \----- XP_013633542.1 [Brassica oleracea] (36)
| | /-89-+
| | | | /----- XP_009139008.1 [Brassica rapa] (15)
| | | \-100+
| \-100-+ \----- GSBRNA2T00149075001 [Brassica napus] (49)
| |
| | /----- RrC3017_p5 [Raphanus raphanistrum] (60)
| \---100---+
| \----- Rsa1.0_01157.1_g00008.1 [Raphanus sativus] (62)
/-72-+
| | /----- GSBRNA2T00121938001 [Brassica napus] (10)
| | /-100+
| | | \----- XP_009116480.1 [Brassica rapa] (37)
| | /-91-+
| | | | /----- GSBRNA2T00155766001 [Brassica napus] (29)
| | | \-100+
| | /-100-+ \----- XP_013605919.1 [Brassica oleracea] (45)
/-73-+ | | |
| | | | | /----- Rsa1.0_05324.1_g00001.1 [Raphanus sativus] (32)
| | \-97-+ \---100---+
| | | \----- RrC456_p7 [Raphanus raphanistrum] (70)
| | |
/-84-+ | \--------------------- 676754832 [Sisymbrium irio] (42)
| | |
| | \------------------------------- Tp5g04890 [Thellungiella parvula] (33)
| |
| \------------------------------------ Thhalv10006040m [Eutrema salsugineum] (38)
|
| /----- Araha.10017s0012.1.p [Arabidopsis halleri] (4)
| /-97-+
| | \----- 486233 [Arabidopsis lyrata] (59)
| /------100------+
/-100+ | \---------- AT3G57800.1 [Arabidopsis thaliana] (35)
| | |
| | | /----- Cagra.0210s0018.1.p [Capsella grandiflora] (9)
| | | /---100---+
| | /-98-+ | \----- Carubv10018503m [Capsella rubella] (50)
| | | | |
| | | | /--91-+ /----- Csa06g033630.1 [Camelina sativa] (30)
| | | | | | /-100+
/-100-+ | | | | | | \----- Csa04g044320.1 [Camelina sativa] (55)
| | \----89---+ \-97-+ \-100+
| | | | \---------- Csa09g070400.1 [Camelina sativa] (71)
| | | |
| | | \--------------------- Bostr.20903s0035.1.p [Boechera stricta] (52)
| | |
| | \------------------------------- KFK35018.1 [Arabis alpina] (13)
| |
| \---------------------------------------------- AA61G00221 [Aethionema arabicum] (63)
|
| /------------------------------- KFK37059.1 [Arabis alpina] (5)
| |
| | /----- Csa05g009300.1 [Camelina sativa] (16)
| | /-84-+
| | | \----- Csa06g048330.1 [Camelina sativa] (27)
| | /-100+
| | | \---------- Csa04g057780.1 [Camelina sativa] (68)
| /-97-+ /--97-+
| | | | | /----- Carubv10023618m [Capsella rubella] (22)
/-100+ | | | \---100---+
| | | | /-100+ \----- Cagra.2636s0014.1.p [Capsella grandiflora] (43)
| | | | | |
| | | | | \--------------------- Bostr.25993s0549.1.p [Boechera stricta] (25)
| | | \-100+
| | | | /---------- AT2G42300.1 [Arabidopsis thaliana] (20)
| | | | |
| | | \------100------+ /----- Araha.0018s0031.1.p [Arabidopsis halleri] (26)
| | | \-93-+
| | | \----- 483321 [Arabidopsis lyrata] (34)
| | /-100+
| | | | /----- GSBRNA2T00010830001 [Brassica napus] (7)
| | | | /-100+
| | | | | \----- XP_013636341.1 [Brassica oleracea] (51)
/-100+ | | | /-100+
| | | | | | | /----- XP_009142817.1 [Brassica rapa] (21)
| | | | | | \-100+
| | | | | /-100-+ \----- GSBRNA2T00132735001 [Brassica napus] (58)
| | \----100---+ | | |
| | | | /-84-+ \--------------- RrC156_p14 [Raphanus raphanistrum] (44)
| | | | | |
| | | \---100---+ \--------------------- 676742304 [Sisymbrium irio] (67)
| | | |
| | | \-------------------------- Tp4g24470 [Thellungiella parvula] (61)
| | |
--97-+ | \----------------------------------------- AA21G00006 [Aethionema arabicum] (19)
| |
| | /----- XP_010524267.1 [Tarenaya hassleriana] (48)
| \-------------------------97------------------------+
| \----- XP_010547446.1 [Tarenaya hassleriana] (54)
|
| /----- orange1.1g015330m [Citrus sinensis] (18)
| /-100+
| | \----- Ciclev10005087m [Citrus clementina] (69)
| /-100+
| | \---------- Neem_3863_f_1 [Azadirachta indica] (40)
\----------------------63----------------------+
\--------------- XP_010534340.1 [Tarenaya hassleriana] (28)
Root part of tree:
/------------------------------------------------------------------- Cotton_A_15346_BGI-A2_v1.0 [Gossypium arboreum] (1)
|
|------------------------------------------------------------------- Gh_A01G1663 [Gossypium hirsutum] (6)
|
| /---------- Gh_D09G1180 [Gossypium hirsutum] (2)
| /---97---+
| | \---------- Gorai.006G139900.1 [Gossypium raimondii] (23)
| /---100---+
| | | /---------- Cotton_A_07791_BGI-A2_v1.0 [Gossypium arboreum] (11)
| | \---99---+
| | \---------- Gh_A09G1174 [Gossypium hirsutum] (46)
| /---100--+
| | | /---------- (128)
+ | | /---100--+
| | | | \---------- evm.model.supercontig_85.120 [Carica papaya] (17)
| /----53---+ \---100---+
| | | \------------------- Eucgr.A02413.1.p [Eucalyptus grandis] (12)
| | |
| | \-------------------------------------- Thecc1EG024828t1 [Theobroma cacao] (31)
| |
| /---100--+ /------------------- Gh_A11G2808 [Gossypium hirsutum] (14)
| | | |
| | | /----86---+ /---------- Gh_D11G3162 [Gossypium hirsutum] (53)
| | | | \---100--+
| | \--------100-------+ \---------- Gorai.007G361700.1 [Gossypium raimondii] (66)
\---100---+ |
| \----------------------------- Cotton_A_06612_BGI-A2_v1.0 [Gossypium arboreum] (24)
|
| /---------- Gorai.002G229100.1 [Gossypium raimondii] (56)
\----------------------100---------------------+
\---------- Gh_D01G1913 [Gossypium hirsutum] (64)
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