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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2578
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 136:
/----- Carubv10023769m [Capsella rubella] (2)
/------100------+
| \----- Cagra.0050s0068.1.p [Capsella grandiflora] (10)
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/-100+ /--------------- Csa06g052800.1 [Camelina sativa] (27)
| | |
| | | /----- Csa05g002870.1 [Camelina sativa] (42)
| \-100-+ /-100+
| | | \----- Csa04330s010.1 [Camelina sativa] (68)
| \-100+
/-63-+ \---------- Csa04g065370.1 [Camelina sativa] (70)
| |
| | /----- 483781 [Arabidopsis lyrata] (4)
| | /-100+
/-100+ | | \----- Araha.0488s0003.1.p [Arabidopsis halleri] (13)
| | \------100------+
| | \---------- AT2G46310.1 [Arabidopsis thaliana] (66)
| |
/-51-+ \------------------------------- Bostr.25993s0138.1.p [Boechera stricta] (3)
| |
| | /----- RrC12471_p1 [Raphanus raphanistrum] (14)
| \--------------57--------------+
| \----- KFK37399.1 [Arabis alpina] (34)
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| /----- GSBRNA2T00132880001 [Brassica napus] (17)
| /-100+
| | \----- XP_009142662.1 [Brassica rapa] (47)
| /-100+
/-100+ | | /----- XP_013634207.1 [Brassica oleracea] (38)
| | | \-100+
| | /-100-+ \----- GSBRNA2T00074044001 [Brassica napus] (59)
| | | |
| | | | /----- RrC7309_p3 [Raphanus raphanistrum] (49)
| | /-78-+ \---100---+
| | | | \----- Rsa1.0_00201.1_g00021.1 [Raphanus sativus] (56)
| | | |
| | | \--------------------- 676734676 [Sisymbrium irio] (28)
| | |
| \------100-----+ /----- RrC13_p2 [Raphanus raphanistrum] (29)
| | /-100+
| | | \----- Rsa1.0_00710.1_g00014.1 [Raphanus sativus] (67)
| | /-100+
| | | \---------- GSBRNA2T00101575001 [Brassica napus] (40)
| \----69----+
| | /----- Tp4g28350 [Thellungiella parvula] (46)
| \----99---+
| \----- Thhalv10001561m [Eutrema salsugineum] (65)
|
/-100-+ /----- XP_010559135.1 [Tarenaya hassleriana] (6)
| | /----------------100----------------+
| | | \----- XP_010545158.1 [Tarenaya hassleriana] (8)
| | |
| | | /----- Gh_A12G0994 [Gossypium hirsutum] (7)
| | | /-100+
| | | | \----- Cotton_A_36662_BGI-A2_v1.0 [Gossypium arboreum] (43)
| | | /-100+
| | | | | /----- Gorai.008G123400.1 [Gossypium raimondii] (21)
| | | | \-100+
| | | | \----- Gh_D12G1113 [Gossypium hirsutum] (53)
| | | /--60-+
| | | | | /----- Gh_D11G0996 [Gossypium hirsutum] (25)
| | | | | /-100+
| | | | | | \----- Gorai.007G105600.1 [Gossypium raimondii] (33)
| | | | \-100+
| | | | | /----- Gh_A11G0854 [Gossypium hirsutum] (50)
| | | | \-97-+
| | | | \----- Cotton_A_14372_BGI-A2_v1.0 [Gossypium arboreum] (69)
| \-100+ /-74-+
| | | | /----- Gh_A11G0855 [Gossypium hirsutum] (15)
| | | | /-99-+
| | | | | \----- Cotton_A_14373_BGI-A2_v1.0 [Gossypium arboreum] (31)
| | | | /-100+
| | | | | | /----- Gh_D11G0997 [Gossypium hirsutum] (20)
| | | | | \-88-+
| | /-99-+ \--68-+ \----- Gorai.007G105700.1 [Gossypium raimondii] (55)
| | | | |
| | | | \--------------- Thecc1EG005203t1 [Theobroma cacao] (24)
| | | |
| | | | /----- Gh_A07G1283 [Gossypium hirsutum] (45)
| | | | /-100+
| | /-66-+ | | \----- Cotton_A_32033_BGI-A2_v1.0 [Gossypium arboreum] (51)
| | | | \------100------+
| | | | | /----- Gh_D07G1396 [Gossypium hirsutum] (63)
| | | | \-96-+
/-100+ | | | \----- Gorai.001G156900.1 [Gossypium raimondii] (71)
| | \-100+ |
| | | \------------------------------- evm.model.supercontig_194.13 [Carica papaya] (32)
| | |
| | | /----- Ciclev10021422m [Citrus clementina] (12)
| | \--------------100-------------+
| | \----- orange1.1g022553m [Citrus sinensis] (18)
| |
| | /----- GSBRNA2T00011673001 [Brassica napus] (9)
| | /-100+
| | | \----- XP_009104332.1 [Brassica rapa] (30)
| | /-100+
| | | | /----- XP_013590289.1 [Brassica oleracea] (41)
| | | \-100+
| | /-100-+ \----- GSBRNA2T00004704001 [Brassica napus] (58)
| | | |
| | | | /----- Rsa1.0_05122.1_g00005.1 [Raphanus sativus] (11)
| | | \---100---+
| | | \----- RrC11177_p1 [Raphanus raphanistrum] (26)
| | |
| | /-100+ /----- XP_009116830.1 [Brassica rapa] (16)
| | | | /-100+
/-100+ | | | | \----- GSBRNA2T00049422001 [Brassica napus] (19)
| | | | | /-95-+
| | | | | | | /----- XP_013602393.1 [Brassica oleracea] (35)
| | | | | | \-99-+
| | | /-64-+ \-100-+ \----- GSBRNA2T00155415001 [Brassica napus] (57)
| | | | | |
| | | | | | /----- RrC12135_p3 [Raphanus raphanistrum] (36)
| | | | | \---100---+
| | | /-96-+ | \----- Rsa1.0_01018.1_g00013.1 [Raphanus sativus] (61)
| | | | | |
| | | | | \-------------------------- 676749128 [Sisymbrium irio] (22)
| | | /-100+ |
--100+ | | | | \------------------------------- Tp5g01780 [Thellungiella parvula] (60)
| | | | |
| | \----100---+ \------------------------------------ Thhalv10006118m [Eutrema salsugineum] (64)
| | |
| | | /----- AA61G00489 [Aethionema arabicum] (44)
| | \-----------------99----------------+
| | \----- KFK35346.1 [Arabis alpina] (62)
| |
| | /----- AT3G61630.1 [Arabidopsis thaliana] (37)
| \------------------------100------------------------+
| \----- 486651 [Arabidopsis lyrata] (52)
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\-------------------------------------------------------------- Bostr.13158s0163.1.p [Boechera stricta] (48)
Root part of tree:
/------------------------------------------------------------------- Csa07g003050.1 [Camelina sativa] (1)
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| /---------------------- Csa16g003720.1 [Camelina sativa] (39)
|---------------------100--------------------+
+ \---------------------- Csa05g093720.1 [Camelina sativa] (54)
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| /--------------------------------------------- (136)
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\---------100---------+ /---------------------- Cagra.0483s0087.1.p [Capsella grandiflora] (5)
\----------100---------+
\---------------------- Carubv10017705m [Capsella rubella] (23)
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