![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM2632
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 126:
/----- Rsa1.0_00050.1_g00030.1 [Raphanus sativus] (2)
/---100---+
| \----- RrC329_p3 [Raphanus raphanistrum] (39)
|
/-100-+ /----- XP_009115302.1 [Brassica rapa] (7)
| | /-100+
| | | \----- GSBRNA2T00074286001 [Brassica napus] (41)
| \-91-+
/-99-+ | /----- XP_013584285.1 [Brassica oleracea] (31)
| | \-100+
| | \----- GSBRNA2T00142385001 [Brassica napus] (40)
| |
| \--------------------- 676760282 [Sisymbrium irio] (20)
/-91-+
| | /----- XP_009103061.1 [Brassica rapa] (43)
| | /-100+
| | | \----- GSBRNA2T00024886001 [Brassica napus] (47)
| \------100------+
/-100+ | /----- XP_013596475.1 [Brassica oleracea] (56)
| | \-100+
| | \----- GSBRNA2T00117331001 [Brassica napus] (62)
/-95-+ |
| | \------------------------------- Tp1g22880 [Thellungiella parvula] (59)
| |
| \------------------------------------ Thhalv10008403m [Eutrema salsugineum] (49)
|
| /----- Carubv10010865m [Capsella rubella] (5)
| /-100+
| | \----- Cagra.2231s0026.1.p [Capsella grandiflora] (25)
/-86-+ |
| | | /----- Csa14g034100.1 [Camelina sativa] (6)
| | | |
| | /-100+-100+----- Csa17g035180.1 [Camelina sativa] (51)
| | | | |
| | | | \----- Csa03g029790.1 [Camelina sativa] (64)
| | | |
/-100-+ \-----------100-----------+ \---------- Bostr.12659s0423.1.p [Boechera stricta] (35)
| | |
| | | /----- AT1G25340.1 [Arabidopsis thaliana] (52)
| | \---100---+
| | \----- Araha.5748s0003.1.p [Arabidopsis halleri] (63)
| |
| \---------------------------------------------- KFK44510.1 [Arabis alpina] (27)
|
| /---------- XP_009105051.1 [Brassica rapa] (3)
| |
| | /----- GSBRNA2T00088169001 [Brassica napus] (15)
| /-100+-99-+
| | | \----- XP_013590797.1 [Brassica oleracea] (57)
| | |
| /-100-+ \---------- GSBRNA2T00093687001 [Brassica napus] (28)
| | |
| | | /----- Rsa1.0_02197.1_g00006.1 [Raphanus sativus] (66)
| | \---100---+
| | \----- RrC594_p5 [Raphanus raphanistrum] (71)
| /-92-+
| | | /----- XP_009127621.1 [Brassica rapa] (16)
| | | /-93-+
/-72-+ | | | \----- GSBRNA2T00070235001 [Brassica napus] (37)
| | | \----100---+
| | /------64------+ | /----- XP_013619583.1 [Brassica oleracea] (24)
| | | | \-100+
| | | | \----- GSBRNA2T00013352001 [Brassica napus] (68)
| | | |
| | | \-------------------------- 676738762 [Sisymbrium irio] (23)
| | |
| | | /----- Carubv10021411m [Capsella rubella] (9)
| | | /---100---+
| | | | \----- Cagra.1111s0025.1.p [Capsella grandiflora] (60)
| | | |
| | | /-100-+ /---------- Csa07g033940.1 [Camelina sativa] (19)
| | | | | |
| | | | \-100+ /----- Csa16g028340.1 [Camelina sativa] (53)
| | | /-99-+ \-52-+
| | | | | \----- Csa05g084650.1 [Camelina sativa] (54)
| | | | |
| | | | \--------------------- Bostr.26959s0063.1.p [Boechera stricta] (61)
| | | /-100+
| | | | | /---------- AT1G68320.1 [Arabidopsis thaliana] (12)
| | | | | |
| \----100---+ | \------100------+ /----- 339072 [Arabidopsis lyrata] (36)
/-100+ | /-91-+ \-100+
| | | | | \----- Araha.2822s0001.1.p [Arabidopsis halleri] (70)
| | | | |
| | |-50-+ \------------------------------- KFK41242.1 [Arabis alpina] (29)
| | | |
| | | \------------------------------------ Tp5g23370 [Thellungiella parvula] (44)
| | |
| | | /----- XP_009105377.1 [Brassica rapa] (10)
| | | /-100+
| | | | \----- GSBRNA2T00102070001 [Brassica napus] (30)
| | | /-100+
| | | | | /----- XP_013590572.1 [Brassica oleracea] (38)
| | | | \-100+
| | |-----------100-----------+ \----- GSBRNA2T00113102001 [Brassica napus] (69)
| | | |
| | | | /----- RrC117_p9 [Raphanus raphanistrum] (13)
| | | \---100---+
| | | \----- Rsa1.0_00920.1_g00028.1 [Raphanus sativus] (50)
| | |
--100+ | \----------------------------------------- Thhalv10018962m [Eutrema salsugineum] (14)
| |
| | /----- XP_010551244.1 [Tarenaya hassleriana] (8)
| \------------------------100------------------------+
| \----- XP_010532345.1 [Tarenaya hassleriana] (67)
|
| /----- orange1.1g021188m [Citrus sinensis] (4)
| /-100+
| | \----- Ciclev10015986m [Citrus clementina] (17)
| /----77----+
| | \---------- evm.model.supercontig_49.71 [Carica papaya] (34)
| |
| | /----- Gh_D01G1815 [Gossypium hirsutum] (18)
| | /-99-+
| /-82-+ | \----- Gorai.002G218600.1 [Gossypium raimondii] (33)
| | | /-100+
| | | | | /----- Cotton_A_27019_BGI-A2_v1.0 [Gossypium arboreum] (26)
| | | | \-100+
| | \-100-+ \----- Gh_A01G1564 [Gossypium hirsutum] (32)
\-----------------51----------------+ |
| \--------------- Thecc1EG009642t1 [Theobroma cacao] (46)
|
|-------------------------- Eucgr.B03006.1.p [Eucalyptus grandis] (42)
|
\-------------------------- evm.model.supercontig_798.1 [Carica papaya] (48)
Root part of tree:
/------------------------------------------------------------------- Cotton_A_36850_BGI-A2_v1.0 [Gossypium arboreum] (1)
|
|------------------------------------------------------------------- Gh_A09G0478 [Gossypium hirsutum] (45)
|
| /---------------------------------------- (126)
| |
+ | /------------- orange1.1g020603m [Citrus sinensis] (22)
| /-----100-----+ /-----100-----+
| | | | \------------- Ciclev10021150m [Citrus clementina] (65)
| | \-----99-----+
| | | /------------- evm.model.supercontig_3.502 [Carica papaya] (55)
\-----83-----+ \-----100-----+
| \------------- evm.model.supercontig_3.501 [Carica papaya] (58)
|
| /------------- Gorai.006G060300.1 [Gossypium raimondii] (11)
\-------------------100------------------+
\------------- Gh_D09G0485 [Gossypium hirsutum] (21)
|




