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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2680
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 122:
/----- GSBRNA2T00067929001 [Brassica napus] (2)
/-70-+
| \----- XP_013625585.1 [Brassica oleracea] (25)
/-100+
| | /----- XP_009109443.1 [Brassica rapa] (27)
| \-100+
/----67----+ \----- GSBRNA2T00150956001 [Brassica napus] (51)
| |
| | /----- RrC1536_p3 [Raphanus raphanistrum] (6)
| \---100---+
| \----- Rsa1.0_00116.1_g00034.1 [Raphanus sativus] (43)
|
| /--------------- XP_009127404.1 [Brassica rapa] (5)
| |
| /-100-+ /---------- GSBRNA2T00074013001 [Brassica napus] (8)
| | | |
| | \-67-+ /----- XP_013638280.1 [Brassica oleracea] (32)
| | \-100+
/-96-+-100+ \----- GSBRNA2T00131242001 [Brassica napus] (44)
| | |
| | | /----- RrC6384_p2 [Raphanus raphanistrum] (34)
| | \------100------+
| | \----- Rsa1.0_01670.1_g00004.1 [Raphanus sativus] (37)
| |
| | /----- XP_013593499.1 [Brassica oleracea] (11)
| | /-100+
| | | \----- GSBRNA2T00100247001 [Brassica napus] (64)
/-99-+ | /-100+
| | | | | /----- GSBRNA2T00050125001 [Brassica napus] (21)
| | | | \-100+
| | \----100---+ \----- XP_009138555.1 [Brassica rapa] (54)
| | |
| | | /----- RrC1850_p4 [Raphanus raphanistrum] (57)
/-93-+ | \---100---+
| | | \----- Rsa1.0_08685.1_g00001.1 [Raphanus sativus] (65)
| | |
| | \------------------------------- 676744004 [Sisymbrium irio] (67)
/-100+ |
| | \------------------------------------ Tp7g36120 [Thellungiella parvula] (15)
| |
/-100-+ \----------------------------------------- Thhalv10025958m [Eutrema salsugineum] (59)
| |
| \---------------------------------------------- KFK30541.1 [Arabis alpina] (36)
|
| /----- Csa11g002900.1 [Camelina sativa] (3)
| /-63-+
| | \----- Csa12g002680.1 [Camelina sativa] (4)
| /-100+
/-99-+ | \---------- Csa10g002580.1 [Camelina sativa] (61)
| | |
| | /-100-+ /----- Carubv10007787m [Capsella rubella] (13)
| | | | /-100+
| | | | | \----- Cagra.5414s0001.1.p [Capsella grandiflora] (31)
| | | \-77-+
| | | \---------- Bostr.25542s0167.1.p [Boechera stricta] (68)
| \--------------100-------------+
| | /----- Araha.53452s0001.1.p [Arabidopsis halleri] (23)
| | /-95-+
| | | \----- 490762 [Arabidopsis lyrata] (26)
| \----100---+
| \---------- AT4G39780.1 [Arabidopsis thaliana] (66)
|
| /----- Gorai.007G240700.1 [Gossypium raimondii] (7)
| /----99---+
| | \----- Gh_D11G2202 [Gossypium hirsutum] (38)
| |
| /-100-+ /----- Cotton_A_35227_BGI-A2_v1.0 [Gossypium arboreum] (19)
| | | /-100+
| | | | \----- Cotton_A_35228_BGI-A2_v1.0 [Gossypium arboreum] (52)
| /-87-+ \-100+
| | | \---------- Gh_A11G1833 [Gossypium hirsutum] (29)
| | |
| | \--------------------- Thecc1EG001147t1 [Theobroma cacao] (40)
/-100+ |
| | /-72-+ /----- Eucgr.I00422.1.p [Eucalyptus grandis] (47)
| | | | /-99-+
| | | | | \----- Eucgr.L03532.1.p [Eucalyptus grandis] (58)
| | | | /-100+
| | | | | \---------- EcS736150.10 [Eucalyptus camaldulensis] (60)
| | | \----95----+
| | /-98-+ \--------------- evm.model.supercontig_996.1 [Carica papaya] (56)
| | | |
| | | | /----- Cotton_A_26719_BGI-A2_v1.0 [Gossypium arboreum] (30)
| | | | /-83-+
| | | | | \----- Gh_A02G1382 [Gossypium hirsutum] (50)
| | | \---------100--------+
| | /-100+ | /----- Gorai.003G038200.1 [Gossypium raimondii] (33)
| | | | \-97-+
| | | | \----- Gh_D03G0342 [Gossypium hirsutum] (46)
| | | |
| | | | /----- Ciclev10025961m [Citrus clementina] (9)
| |-------99------+ \--------------100-------------+
--86-+ | | \----- orange1.1g018103m [Citrus sinensis] (49)
| | |
| | | /----- XP_010531386.1 [Tarenaya hassleriana] (28)
| | \----------------100----------------+
| | \----- XP_010526650.1 [Tarenaya hassleriana] (48)
| |
| \--------------------------------------------------------- AA30G00360 [Aethionema arabicum] (20)
|
| /----- Csa16g043950.1 [Camelina sativa] (16)
| /-52-+
| | \----- Csa07g052310.1 [Camelina sativa] (39)
| /-100+
| | \---------- Csa09g086530.1 [Camelina sativa] (18)
| /-100-+
| | \--------------- Carubv10025369m [Capsella rubella] (62)
| /-99-+
| | \--------------------- Bostr.5022s0013.1.p [Boechera stricta] (63)
| |
\-----------------97----------------+ /----- Araha.3205s0001.1.p [Arabidopsis halleri] (17)
| /-100+
| | \----- 900671 [Arabidopsis lyrata] (53)
\-------97------+
\---------- AT2G22200.1 [Arabidopsis thaliana] (41)
Root part of tree:
/------------------------------------------------------------------- XP_009140335.1 [Brassica rapa] (1)
|
|------------------------------------------------------------------- GSBRNA2T00032840001 [Brassica napus] (35)
|
| /----------- (122)
| /----100---+
| | \----------- KFK32834.1 [Arabis alpina] (45)
| /----100---+
+ | | /----------- Thhalv10000302m [Eutrema salsugineum] (10)
| | \----54----+
| /----100----+ \----------- 676746666 [Sisymbrium irio] (55)
| | |
| | \--------------------------------- Tp4g01260 [Thellungiella parvula] (22)
| /----100---+
| | | /----------- Rsa1.0_01225.1_g00002.1 [Raphanus sativus] (14)
| | \---------------100---------------+
\----100---+ \----------- RrC25501_p1 [Raphanus raphanistrum] (42)
|
| /----------- XP_013635195.1 [Brassica oleracea] (12)
\---------------------100--------------------+
\----------- GSBRNA2T00149695001 [Brassica napus] (24)
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