![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM2767
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 127:
/--------------- Thecc1EG044087t1 [Theobroma cacao] (2)
|
| /----- Cotton_A_32681_BGI-A2_v1.0 [Gossypium arboreum] (31)
/-100-+ /-98-+
| | | \----- Gh_A05G2476 [Gossypium hirsutum] (50)
| \-100+
| | /----- Gh_D05G2748 [Gossypium hirsutum] (39)
| \-100+
| \----- Gorai.009G304600.1 [Gossypium raimondii] (58)
|
/-100+ /----- Ciclev10031295m [Citrus clementina] (7)
| | /-100+
| | | \----- orange1.1g010601m [Citrus sinensis] (21)
| | /-100+
| | | | /----- Neem_37403_f_1 [Azadirachta indica] (40)
| | | \-100+
/---100---+ \-100-+ \----- Neem_813_f_2 [Azadirachta indica] (63)
| | |
| | \--------------- evm.model.supercontig_128.45 [Carica papaya] (37)
| |
| | /----- Eucgr.J01012.1.p [Eucalyptus grandis] (12)
| \---------100--------+
| \----- EcC054677.20 [Eucalyptus camaldulensis] (68)
|
| /----- Cotton_A_00524_BGI-A2_v1.0 [Gossypium arboreum] (3)
| /-100+
| | \----- Gh_A01G1784 [Gossypium hirsutum] (34)
| /-100+
| | | /----- Gorai.002G242000.1 [Gossypium raimondii] (15)
| | \-86-+
| /--93-+ \----- Gh_D01G2026 [Gossypium hirsutum] (24)
| | |
| | \--------------- Thecc1EG022457t1 [Theobroma cacao] (11)
/-100+ |
| | | /---------- Gh_A01G1153 [Gossypium hirsutum] (4)
| | /-100+ |
| | | | /-57-+ /----- Gh_D01G1259 [Gossypium hirsutum] (29)
| | | | | \-100+
| | | | | \----- Gorai.002G159600.1 [Gossypium raimondii] (62)
| | | \-100-+
| | | | /----- Cotton_A_36212_BGI-A2_v1.0 [Gossypium arboreum] (9)
| | | \----84---+
| | /-97-+ \----- Cotton_A_36213_BGI-A2_v1.0 [Gossypium arboreum] (59)
| | | |
| | | | /----- EcC050446.20 [Eucalyptus camaldulensis] (6)
| | | | /---100---+
/-99-+ | | | | \----- Eucgr.K02072.1.p [Eucalyptus grandis] (14)
| | | | | |
| | | | \----96----+ /----- Neem_33431_f_1 [Azadirachta indica] (27)
| | \-100+ | /-100+
| | | | | \----- Neem_16663_f_1 [Azadirachta indica] (32)
| | | \-100+
| | | | /----- Ciclev10011338m [Citrus clementina] (43)
| | | \-100+
| | | \----- orange1.1g014869m [Citrus sinensis] (53)
| | |
| | \------------------------------- evm.model.supercontig_5.72 [Carica papaya] (52)
| |
| | /----- XP_010543461.1 [Tarenaya hassleriana] (48)
| \----------------100----------------+
/-100-+ \----- XP_010558209.1 [Tarenaya hassleriana] (71)
| |
| | /----- Cagra.4686s0011.1.p [Capsella grandiflora] (10)
| | /---100---+
| | | \----- Carubv10015883m [Capsella rubella] (41)
| | |
| | /-100-+ /----- Csa01g010830.1 [Camelina sativa] (35)
| | | | /-95-+
| | | | | \----- Csa19g013490.1 [Camelina sativa] (51)
| | /-100+ \-100+
/-51-+ | | | \---------- Csa15g011480.1 [Camelina sativa] (54)
| | | | |
| | | | \--------------------- Bostr.22252s0065.1.p [Boechera stricta] (42)
| | \--------100--------+
| | | /----- Araha.0122s0004.1.p [Arabidopsis halleri] (30)
| | | /-100+
| | | | \----- 341138 [Arabidopsis lyrata] (49)
| | \-------96------+
| | \---------- AT3G10000.1 [Arabidopsis thaliana] (56)
/-52-+ |
| | \---------------------------------------------------- AA19G00218 [Aethionema arabicum] (47)
| |
| | /----- XP_013607315.1 [Brassica oleracea] (22)
| | /-100+
| | | \----- GSBRNA2T00032265001 [Brassica napus] (28)
| | /-100+
| | | | /----- XP_009122682.1 [Brassica rapa] (44)
| | | \-100+
| \-------------------100-------------------+ \----- GSBRNA2T00136444001 [Brassica napus] (55)
| |
| \--------------- Rsa1.0_00180.1_g00018.1 [Raphanus sativus] (64)
|
| /----- XP_009130776.1 [Brassica rapa] (18)
| /-100+
| | \----- GSBRNA2T00049297001 [Brassica napus] (66)
| /-100+
| | | /----- GSBRNA2T00134283001 [Brassica napus] (67)
| | \-100+
| /-100-+ \----- XP_013626624.1 [Brassica oleracea] (69)
| | |
|-------------------90-------------------+ \--------------- Rsa1.0_01663.1_g00001.1 [Raphanus sativus] (60)
--100+ |
| \--------------------- Tp6g39040 [Thellungiella parvula] (61)
|
|-------------------------------------------------------------- KFK24832.1 [Arabis alpina] (19)
|
| /--------------------- 676717980 [Sisymbrium irio] (20)
| |
| | /----- XP_009125515.1 [Brassica rapa] (23)
| | /-100+
| | | \----- GSBRNA2T00119612001 [Brassica napus] (70)
|-------------------70-------------------+ /-100+
| | | | /----- XP_013618687.1 [Brassica oleracea] (25)
| | | \-100+
| | | \----- GSBRNA2T00080047001 [Brassica napus] (33)
| \-100-+
| | /----- RrC5396_p1 [Raphanus raphanistrum] (26)
| | |
| \---100---+----- Rsa1.0_02122.1_g00002.1 [Raphanus sativus] (45)
| |
| \----- RrC5396_p2 [Raphanus raphanistrum] (46)
|
\-------------------------------------------------------------- Thhalv10013048m [Eutrema salsugineum] (38)
Root part of tree:
/------------------------------------------------------------------- 487148 [Arabidopsis lyrata] (1)
|
|------------------------------------------------------------------- Araha.53973s0001.1.p [Arabidopsis halleri] (17)
|
| /------------- (127)
| /------96-----+
| | \------------- Bostr.2128s0082.1.p [Boechera stricta] (8)
| /-----98-----+
+ | | /------------- Cagra.0154s0034.1.p [Capsella grandiflora] (13)
| | \-----100-----+
| | \------------- Carubv10000532m [Capsella rubella] (57)
| /-----100-----+
| | | /------------- Csa08g060820.1 [Camelina sativa] (5)
| | | /------55-----+
| | | | \------------- Csa13g003730.1 [Camelina sativa] (36)
\-----100----+ \-----100----+
| \--------------------------- Csa20g003780.1 [Camelina sativa] (16)
|
\------------------------------------------------------ AT5G03680.1 [Arabidopsis thaliana] (65)
|




