![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM2818
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 106:
/----- Tp5g28350 [Thellungiella parvula] (2)
/---------100--------+
| \----- Tp5g28620 [Thellungiella parvula] (26)
|
| /----- GSBRNA2T00023438001 [Brassica napus] (3)
| /-100+
| | \----- XP_009127989.1 [Brassica rapa] (21)
| /-100+
| | | /----- GSBRNA2T00137098001 [Brassica napus] (32)
/-91-+ | \-100+
| | /--97-+ \----- XP_013619564.1 [Brassica oleracea] (37)
| | | |
| | | | /----- Rsa1.0_00687.1_g00003.1 [Raphanus sativus] (17)
| | | \---100---+
| | | \----- RrC26427_p1 [Raphanus raphanistrum] (27)
| | |
| \-90-+ /----- GSBRNA2T00102649001 [Brassica napus] (8)
| | /-100+
| | | \----- XP_009106005.1 [Brassica rapa] (39)
/-73-+ | /-100+
| | | | | /----- XP_013591955.1 [Brassica oleracea] (47)
| | | | \-100+
| | \-100-+ \----- GSBRNA2T00103420001 [Brassica napus] (52)
| | |
| | | /----- Rsa1.0_00898.1_g00001.1 [Raphanus sativus] (41)
| | \---100---+
| | \----- RrC985_p1 [Raphanus raphanistrum] (63)
| |
| \------------------------------- Thhalv10019669m [Eutrema salsugineum] (59)
|
/-70-+ /----- Csa09g077980.1 [Camelina sativa] (4)
| | /-86-+
| | | \----- Csa16g036120.1 [Camelina sativa] (42)
| | /-100+
| | | \---------- Csa07g040610.1 [Camelina sativa] (9)
| |---------72---------+
| | | /----- Cagra.4894s0009.1.p [Capsella grandiflora] (36)
| | \---100---+
/-60-+ | \----- Carubv10021434m [Capsella rubella] (46)
| | |
| | \------------------------------------ Bostr.10273s0016.1.p [Boechera stricta] (61)
| |
| | /----- Araha.38479s0013.1.p [Arabidopsis halleri] (5)
/-100-+ | /-100+
| | | | \----- 877443 [Arabidopsis lyrata] (45)
| | \--------------100-------------+
| | \---------- AT1G73410.1 [Arabidopsis thaliana] (35)
/-100+ |
| | \---------------------------------------------- KFK41782.1 [Arabis alpina] (10)
| |
| \---------------------------------------------------- AA31G00611 [Aethionema arabicum] (7)
|
| /--------------------- Thecc1EG013357t1 [Theobroma cacao] (11)
| |
| | /----- orange1.1g025697m [Citrus sinensis] (40)
| | /-100+
| /-74-+ | \----- Ciclev10021859m [Citrus clementina] (65)
| | | /-100+
| | | | \---------- Neem_3239_f_4 [Azadirachta indica] (64)
| /-54-+ \--84-+
| | | \--------------- Eucgr.K02297.1.p [Eucalyptus grandis] (49)
| | |
| | \-------------------------- evm.model.supercontig_7.125 [Carica papaya] (20)
| |
/-100+ | /----- Gh_D12G2588 [Gossypium hirsutum] (12)
| | | /-93-+
| | | | \----- Gorai.008G293100.1 [Gossypium raimondii] (53)
| |-----------100-----------+---------100--------+
| | | | /----- Gh_A12G2460 [Gossypium hirsutum] (50)
| | | \-93-+
| | | \----- Cotton_A_01467_BGI-A2_v1.0 [Gossypium arboreum] (60)
| | |
| | | /----- Gh_D11G0013 [Gossypium hirsutum] (16)
--73-+ | | /-100+
| | | | \----- Gorai.007G002200.1 [Gossypium raimondii] (38)
| | \---------100--------+
| | | /----- Gh_A11G0016 [Gossypium hirsutum] (56)
| | \-98-+
| | \----- Cotton_A_07627_BGI-A2_v1.0 [Gossypium arboreum] (58)
| |
| \--------------------------------------------------------- XP_010537518.1 [Tarenaya hassleriana] (66)
|
\-------------------------------------------------------------- AA39G00089 [Aethionema arabicum] (43)
Root part of tree:
/------------------------------------------------------------------- XP_013603420.1 [Brassica oleracea] (1)
|
|------------------------------------------------------------------- GSBRNA2T00136799001 [Brassica napus] (6)
|
| /----------------------------------------------- (106)
| |
| | /------- XP_009110374.1 [Brassica rapa] (13)
| | /-100-+
| | | \------- GSBRNA2T00102962001 [Brassica napus] (62)
| | /--100-+
| | | \------------- XP_013603727.1 [Brassica oleracea] (15)
| | /--77--+
| | | \-------------------- GSBRNA2T00139651001 [Brassica napus] (54)
| | /-----100----+
| | | | /------- Rsa1.0_02923.1_g00001.1 [Raphanus sativus] (29)
| | | \--------100--------+
| | | \------- RrC1476_p4 [Raphanus raphanistrum] (31)
| | |
| | | /------- Carubv10012605m [Capsella rubella] (14)
| | | /-----100----+
| | | | \------- Cagra.2175s0026.1.p [Capsella grandiflora] (69)
| | | |
+ |--92--+ /--100-+ /------------- Csa03g021780.1 [Camelina sativa] (23)
| /--100-+ | | | |
| | | | | \--100-+ /------- Csa14g022280.1 [Camelina sativa] (48)
| | | | | \--87-+
| | | | | \------- Csa17g023720.1 [Camelina sativa] (55)
| | | | /--89-+
| | | | | | /------- 889207 [Arabidopsis lyrata] (24)
| | | | | | /--94-+
| | | | | | | \------- Araha.18459s0003.1.p [Arabidopsis halleri] (44)
| | | \--100-+ \------95-----+
| | | | \------------- AT1G17950.1 [Arabidopsis thaliana] (57)
| | | |
| /--97-+ | \--------------------------------- Bostr.7128s0403.1.p [Boechera stricta] (30)
| | | |
| | | | /------- Thhalv10008597m [Eutrema salsugineum] (22)
| | | |-------------------96------------------+
| | | | \------- KFK42298.1 [Arabis alpina] (28)
| | | |
| | | |----------------------------------------------- 676727208 [Sisymbrium irio] (25)
| | | |
| | | \----------------------------------------------- Tp1g16020 [Thellungiella parvula] (51)
\--100-+ |
| | /------- Rsa1.0_00298.1_g00006.1 [Raphanus sativus] (19)
| \----------------------100---------------------+
| \------- RrC8926_p1 [Raphanus raphanistrum] (33)
|
| /------------- XP_009117637.1 [Brassica rapa] (18)
| |
| | /------- GSBRNA2T00016228001 [Brassica napus] (34)
\----------------------100---------------------+-100-+
| \------- GSBRNA2T00059552001 [Brassica napus] (68)
|
\------------- GSBRNA2T00016229001 [Brassica napus] (67)
|




