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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2819
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 123:
/----- 477611 [Arabidopsis lyrata] (2)
/-100+
| \----- Araha.24636s0001.1.p [Arabidopsis halleri] (36)
/------100------+
| \---------- AT3G03660.2 [Arabidopsis thaliana] (51)
|
| /----- Carubv10016081m [Capsella rubella] (14)
| /-100+
/-100+ | \----- Cagra.2098s0022.1.p [Capsella grandiflora] (22)
| | /----62----+
| | | \---------- Bostr.19046s0084.1.p [Boechera stricta] (17)
| | |
| | | /----- Csa06659s010.1 [Camelina sativa] (32)
| \-93-+ /-98-+
/-73-+ | | \----- Csa19g005790.1 [Camelina sativa] (60)
| | | /-94-+
| | | | \---------- Csa15g003480.1 [Camelina sativa] (34)
| | \-100-+
| | \--------------- Csa01g003350.1 [Camelina sativa] (49)
| |
| \------------------------------- KFK37795.1 [Arabis alpina] (29)
|
| /----- GSBRNA2T00030069001 [Brassica napus] (7)
| /---100---+
| | \----- XP_009102064.1 [Brassica rapa] (46)
| |
| /-100-+ /---------- XP_013630260.1 [Brassica oleracea] (45)
| | | |
| | \-100+ /----- GSBRNA2T00015364001 [Brassica napus] (59)
/-100+ | \-100+
| | /-100+ \----- GSBRNA2T00044464001 [Brassica napus] (65)
| | | |
| | | | /----- Rsa1.0_00008.1_g00082.1 [Raphanus sativus] (9)
| | /-68-+ \------100------+
| | | | \----- RrC26857_p1 [Raphanus raphanistrum] (47)
| | | |
| | | \-------------------------- Thhalv10022222m [Eutrema salsugineum] (26)
| | |
| | | /----- XP_013585030.1 [Brassica oleracea] (8)
| | | /-100+
| | | | \----- GSBRNA2T00097213001 [Brassica napus] (23)
| | | /-100+
/-94-+ | | | | /----- XP_009130381.1 [Brassica rapa] (13)
| | \-100+ | \-100+
| | | /-100-+ \----- GSBRNA2T00004123001 [Brassica napus] (61)
| | | | |
| | | | | /----- Rsa1.0_01285.1_g00001.1 [Raphanus sativus] (20)
| | |---100---+ \---100---+
| | | | \----- RrC599_p1 [Raphanus raphanistrum] (50)
| | | |
| | | \--------------------- 676731238 [Sisymbrium irio] (41)
| | |
| | \------------------------------- Tp3g02640 [Thellungiella parvula] (21)
| |
| \----------------------------------------- AA10G00239 [Aethionema arabicum] (3)
|
| /--------------- Gorai.013G196400.1 [Gossypium raimondii] (5)
| |
| | /----- Gh_A13G1402 [Gossypium hirsutum] (16)
| /-100-+ /-99-+
| | | | \----- Cotton_A_22352_BGI-A2_v1.0 [Gossypium arboreum] (44)
| | \-100+
| /-80-+ \---------- Gh_D13G1717 [Gossypium hirsutum] (62)
/-100-+ | |
| | | \--------------------- Thecc1EG025805t1 [Theobroma cacao] (53)
| | |
| | | /----- Neem_14574_f_2 [Azadirachta indica] (18)
| | | /-100+
| | /-78-+ | \----- Neem_37811_f_1 [Azadirachta indica] (43)
| | | | /----100---+
| | | | | | /----- orange1.1g047211m [Citrus sinensis] (24)
| | | | | \-100+
| | | | | \----- Ciclev10021682m [Citrus clementina] (33)
| | | | |
| | | \-70-+ /----- Gh_A11G2676 [Gossypium hirsutum] (28)
| | /-91-+ | /-100+
| | | | | | \----- Cotton_A_39066_BGI-A2_v1.0 [Gossypium arboreum] (40)
/-70-+ | | | | /-100+
| | | | | | | \---------- Gh_D11G3037 [Gossypium hirsutum] (54)
| | | | | \-100-+
| | | /-100+ | \--------------- Gorai.007G346300.1 [Gossypium raimondii] (63)
| | | | | |
| | | | | \------------------------------- evm.model.supercontig_73.3 [Carica papaya] (42)
| | | | |
| | \-99-+ \------------------------------------ Eucgr.A02149.1.p [Eucalyptus grandis] (31)
| | |
| | | /----- XP_010550253.1 [Tarenaya hassleriana] (19)
| | \----------------100----------------+
| | \----- XP_010525292.1 [Tarenaya hassleriana] (48)
| |
| \---------------------------------------------------- Tp6g26440 [Thellungiella parvula] (30)
|
| /--------------- XP_009126209.1 [Brassica rapa] (4)
| |
| /--68-+ /---------- XP_013615820.1 [Brassica oleracea] (10)
| | | |
| | \-100+ /----- GSBRNA2T00052050001 [Brassica napus] (12)
/-64-+ | | |
| | /-100+ \-97-+----- XP_013616822.1 [Brassica oleracea] (38)
| | | | |
| | | | \----- XP_013619447.1 [Brassica oleracea] (52)
| | | |
| | | \--------------------- GSBRNA2T00114830001 [Brassica napus] (64)
| | |
| |--------------95--------------+ /----- XP_013610179.1 [Brassica oleracea] (11)
| | | /-100+
| | | | \----- GSBRNA2T00094778001 [Brassica napus] (27)
| | | /-100+
--87-+ | | | | /----- GSBRNA2T00065904001 [Brassica napus] (39)
| | | | \-100+
| | \----100---+ \----- XP_009121049.1 [Brassica rapa] (67)
| | |
| | | /----- Rsa1.0_08958.1_g00001.1 [Raphanus sativus] (35)
| | \---100---+
| | \----- RrC4410_p2 [Raphanus raphanistrum] (56)
| |
| \--------------------------------------------------------- 676789730 [Sisymbrium irio] (68)
|
\-------------------------------------------------------------- Thhalv10015651m [Eutrema salsugineum] (37)
Root part of tree:
/------------------------------------------------------------------- Csa08g010060.1 [Camelina sativa] (1)
|
| /---------------------------------------- (123)
| |
| /-----100-----+ /--------------------------- AT5G17810.1 [Arabidopsis thaliana] (25)
| | | |
| | \-----100----+ /------------- Araha.12521s0001.1.p [Arabidopsis halleri] (55)
| | \-----100-----+
+-----100----+ \------------- 862185 [Arabidopsis lyrata] (66)
| |
| | /------------- Cagra.6254s0027.1.p [Capsella grandiflora] (15)
| \-------------------100------------------+
| \------------- Carubv10003719m [Capsella rubella] (58)
|
| /------------- Csa13g020630.1 [Camelina sativa] (6)
\--------------------------57-------------------------+
\------------- Csa20g026000.1 [Camelina sativa] (57)
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