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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2900
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 106:
/----- RrC10193_p1 [Raphanus raphanistrum] (3)
/---100---+
| \----- Rsa1.0_00174.1_g00005.1 [Raphanus sativus] (64)
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/-100-+ /----- GSBRNA2T00095023001 [Brassica napus] (44)
| | /-100+
| | | \----- XP_009107442.1 [Brassica rapa] (52)
| \-100+
| | /----- GSBRNA2T00071800001 [Brassica napus] (54)
| \-100+
| \----- XP_013603200.1 [Brassica oleracea] (56)
/-59-+
| | /----- RrC11149_p1 [Raphanus raphanistrum] (4)
| |------100------+
| | \----- Rsa1.0_03305.1_g00002.1 [Raphanus sativus] (48)
| |
| |--------------------- Thhalv10012033m [Eutrema salsugineum] (50)
| |
| \--------------------- Tp1g34200 [Thellungiella parvula] (59)
/-89-+
| | /----- GSBRNA2T00122982001 [Brassica napus] (8)
| | /-100+
| | | \----- XP_009119797.1 [Brassica rapa] (34)
| | /-100+
| | | | /----- GSBRNA2T00095130001 [Brassica napus] (42)
| | | \-100+
/-97-+ \----100---+ \----- XP_013589911.1 [Brassica oleracea] (63)
| | |
| | | /----- Rsa1.0_05171.1_g00003.1 [Raphanus sativus] (25)
| | \---100---+
| | \----- RrC3106_p1 [Raphanus raphanistrum] (58)
| |
| \------------------------------- 676708560 [Sisymbrium irio] (7)
|
| /----- 473862 [Arabidopsis lyrata] (6)
| /-85-+
| | \----- Araha.0722s0002.1.p [Arabidopsis halleri] (13)
| /-86-+
| | \---------- AT1G46264.1 [Arabidopsis thaliana] (47)
| |
/-100+ | /----- Csa03g047530.1 [Camelina sativa] (16)
| | | |
| | | /-100+----- Csa17g071540.1 [Camelina sativa] (22)
| | | | |
| |---------100--------+ | \----- Csa14g050890.1 [Camelina sativa] (66)
| | |-100+
| | | | /----- Cagra.1735s0008.1.p [Capsella grandiflora] (45)
| | | \-100+
| | | \----- Carubv10009522m [Capsella rubella] (61)
/-99-+ | |
| | | \--------------- Bostr.12302s0136.1.p [Boechera stricta] (36)
| | |
| | | /----- KFK44645.1 [Arabis alpina] (33)
| | \--------------57--------------+
| | \----- AA625G00003 [Aethionema arabicum] (37)
/-100-+ |
| | | /----- Bostr.3148s0205.1.p [Boechera stricta] (12)
| | \----------------100----------------+
| | \----- AA3G00228 [Aethionema arabicum] (41)
| |
| | /----- XP_010541155.1 [Tarenaya hassleriana] (27)
| \-------------------90-------------------+
| \----- XP_010530513.1 [Tarenaya hassleriana] (29)
|
| /----- Gh_A09G1035 [Gossypium hirsutum] (10)
| /-78-+
| | \----- Cotton_A_01784_BGI-A2_v1.0 [Gossypium arboreum] (65)
/-51-+ /-61-+
| | | \---------- Gh_D09G1056 [Gossypium hirsutum] (24)
| | /-100-+
| | | \--------------- Gorai.006G125000.1 [Gossypium raimondii] (23)
| | /-100+
| | | \--------------------- Thecc1EG040889t1 [Theobroma cacao] (49)
| | |
| | | /----- Eucgr.J00680.1.p [Eucalyptus grandis] (17)
| | /-68-+---------100--------+
/-51-+ | | | \----- EcS752808.10 [Eucalyptus camaldulensis] (53)
| | | | |
| | | | | /----- Neem_6438_f_1 [Azadirachta indica] (30)
| | \---------100--------+ \---------100--------+
| | | \----- Neem_19563_f_1 [Azadirachta indica] (60)
| | |
--97-+ | \------------------------------- XP_010521560.1 [Tarenaya hassleriana] (21)
| |
| | /----- Eucgr.F02327.1.p [Eucalyptus grandis] (5)
| \------------------------100------------------------+
| \----- EcC031945.20 [Eucalyptus camaldulensis] (38)
|
\-------------------------------------------------------------- Eucgr.F00215.1.p [Eucalyptus grandis] (11)
Root part of tree:
/------------------------------------------------------------------- Gh_D06G0154 [Gossypium hirsutum] (1)
|
|------------------------------------------------------------------- Gorai.010G020700.1 [Gossypium raimondii] (35)
|
| /----------- Gh_A01G1000 [Gossypium hirsutum] (2)
| /----100---+
| | \----------- Cotton_A_37093_BGI-A2_v1.0 [Gossypium arboreum] (62)
| /----------100---------+
| | | /----------- Gh_D01G1059 [Gossypium hirsutum] (26)
| | \----84----+
| | \----------- Gorai.002G135200.1 [Gossypium raimondii] (57)
| |
| | /--------------------------------- (106)
| | |
| |-----66----+ /---------------------- Neem_6387_f_5 [Azadirachta indica] (9)
| | | |
+ | \----89----+ /----------- orange1.1g016692m [Citrus sinensis] (15)
| | \----100---+
| | \----------- Ciclev10001482m [Citrus clementina] (40)
| |
| | /----------- Gh_A05G1757 [Gossypium hirsutum] (14)
| | /----97----+
| | | \----------- Cotton_A_08661_BGI-A2_v1.0 [Gossypium arboreum] (39)
| /----100---+ |
| | |----------96----------+---------------------- Gorai.009G213100.1 [Gossypium raimondii] (18)
| | | |
| | | \---------------------- Gh_D05G1952 [Gossypium hirsutum] (32)
| | |
| | |--------------------------------------------- Thecc1EG033816t1 [Theobroma cacao] (19)
| | |
| | | /----------- Gh_D02G0907 [Gossypium hirsutum] (20)
| | | /----100---+
\----99----+ | | \----------- Gorai.005G102000.1 [Gossypium raimondii] (46)
| |----------100---------+
| | | /----------- Gh_A03G0678 [Gossypium hirsutum] (51)
| | \----100---+
| | \----------- Cotton_A_39878_BGI-A2_v1.0 [Gossypium arboreum] (55)
| |
| \--------------------------------------------- evm.model.supercontig_49.32 [Carica papaya] (43)
|
| /----------- Gh_A06G0163 [Gossypium hirsutum] (28)
\---------------------100--------------------+
\----------- Cotton_A_14899_BGI-A2_v1.0 [Gossypium arboreum] (31)
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