![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM2959
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 106:
/----- XP_009131440.1 [Brassica rapa] (2)
/-100+
| \----- GSBRNA2T00130025001 [Brassica napus] (57)
/-100+
| | /----- GSBRNA2T00140437001 [Brassica napus] (22)
| \-100+
/---------100--------+ \----- XP_013626347.1 [Brassica oleracea] (61)
| |
| | /----- Rsa1.0_03249.1_g00003.1 [Raphanus sativus] (13)
| \---100---+
| \----- RrC5522_p1 [Raphanus raphanistrum] (24)
|
| /----- RrC1631_p1 [Raphanus raphanistrum] (6)
| /------100------+
| | \----- Rsa1.0_04287.1_g00003.1 [Raphanus sativus] (14)
| |
| | /----- GSBRNA2T00135553001 [Brassica napus] (20)
/-90-+ /-100+ /-100+
| | | | | \----- XP_009121607.1 [Brassica rapa] (43)
| | | | /-100+
| | | | | \---------- GSBRNA2T00135551001 [Brassica napus] (21)
| | | \-100-+
| | | | /----- GSBRNA2T00142494001 [Brassica napus] (26)
| | /-59-+ \---100---+
| | | | \----- XP_013609564.1 [Brassica oleracea] (31)
| | | |
| | | |-------------------------- Thhalv10013146m [Eutrema salsugineum] (10)
| \-66-+ |
/-100+ | \-------------------------- Tp6g28940 [Thellungiella parvula] (38)
| | |
| | \------------------------------- 676789432 [Sisymbrium irio] (9)
| |
| | /----- GSBRNA2T00143283001 [Brassica napus] (16)
| | /-100+
| | | \----- XP_009126032.1 [Brassica rapa] (45)
| | /-90-+
| | | | /----- XP_013618884.1 [Brassica oleracea] (60)
| | | \-100+
| \-----------100-----------+ \----- GSBRNA2T00039618001 [Brassica napus] (66)
| |
| | /----- RrC8861_p1 [Raphanus raphanistrum] (64)
| \---100---+
| \----- Rsa1.0_00301.1_g00043.1 [Raphanus sativus] (65)
|
/-100-+ /----- Cagra.1036s0044.1.p [Capsella grandiflora] (11)
| | /-100+
| | | \----- Carubv10000606m [Capsella rubella] (35)
| | /-94-+
| | | \---------- Bostr.2902s0247.1.p [Boechera stricta] (34)
| | |
| | /-100-+ /----- Csa13g017960.1 [Camelina sativa] (44)
| | | | /-96-+
| | | | | \----- Csa20g021610.1 [Camelina sativa] (59)
| | | \-100+
/-100+ | | \---------- Csa08g007210.1 [Camelina sativa] (49)
| | | /-100+
| | | | | /----- Araha.0323s0001.1.p [Arabidopsis halleri] (33)
| | | | | /-100+
| | | | | | \----- 909483 [Arabidopsis lyrata] (50)
| | \---------78--------+ \----100---+
| | | \---------- AT5G15130.1 [Arabidopsis thaliana] (46)
| | |
/-100+ | \-------------------------- KFK25750.1 [Arabis alpina] (41)
| | |
| | \---------------------------------------------------- AA40G00575 [Aethionema arabicum] (25)
| |
| | /--------------------- Tp3g00840 [Thellungiella parvula] (5)
| | |
| | | /----- RrC10917_p2 [Raphanus raphanistrum] (17)
| \----------------100----------------+ /---100---+
| | | \----- Rsa1.0_05018.1_g00003.1 [Raphanus sativus] (63)
--100+ | |
| \-100-+ /---------- XP_013592125.1 [Brassica oleracea] (37)
| | |
| \-100+ /----- GSBRNA2T00041323001 [Brassica napus] (42)
| \-100+
| \----- XP_009125039.1 [Brassica rapa] (54)
|
| /----- XP_010550066.1 [Tarenaya hassleriana] (30)
\---------------------------100--------------------------+
\----- XP_010551863.1 [Tarenaya hassleriana] (55)
Root part of tree:
/------------------------------------------------------------------- Thecc1EG013860t1 [Theobroma cacao] (1)
|
| /--------------- (106)
| |
| /----------84---------+ /------- Eucgr.I01927.1.p [Eucalyptus grandis] (15)
| | \---61--+
| | \------- evm.model.supercontig_14.32 [Carica papaya] (51)
| |
| | /---------------------- Thecc1EG018403t1 [Theobroma cacao] (18)
| | |
| /--100--+ | /------- Cotton_A_28997_BGI-A2_v1.0 [Gossypium arboreum] (19)
| | | /--100--+ /--100--+
| | | | | | \------- Gh_A05G3158 [Gossypium hirsutum] (23)
| | | | \--100-+
| | | | | /------- Gh_D04G0470 [Gossypium hirsutum] (27)
| | | | \--100--+
| | \--100-+ \------- Gorai.012G056800.1 [Gossypium raimondii] (40)
| | |
| | | /------- orange1.1g045987m [Citrus sinensis] (29)
| | | /--100--+
| /--100-+ | | \------- Ciclev10011501m [Citrus clementina] (58)
| | | \------100-----+
| | | | /------- Neem_35311_f_2 [Azadirachta indica] (48)
| | | \--100--+
| | | \------- Neem_2350_f_4 [Azadirachta indica] (62)
| | |
| | | /--------------- Neem_944_f_2 [Azadirachta indica] (3)
+ | | |
| | | /--100-+ /------- Ciclev10031162m [Citrus clementina] (12)
| /---94--+ | | \--100--+
| | | \----------100---------+ \------- orange1.1g010903m [Citrus sinensis] (68)
| | | |
| | | \---------------------- Eucgr.G02535.1.p [Eucalyptus grandis] (47)
| | |
| | | /---------------------- evm.model.supercontig_17.220 [Carica papaya] (4)
| | | |
| | | | /------- EcC050396.60 [Eucalyptus camaldulensis] (36)
|--100-+ \--------------69-------------+ /--100--+
| | | | \------- Eucgr.B00437.1.p [Eucalyptus grandis] (52)
| | \--100-+
| | \--------------- Eucgr.K02453.1.p [Eucalyptus grandis] (53)
| |
| | /------- orange1.1g009794m [Citrus sinensis] (8)
| | /--100--+
| | | \------- Ciclev10019383m [Citrus clementina] (28)
| \---------------------100--------------------+
| | /------- Neem_2710_f_3 [Azadirachta indica] (39)
| \--100--+
| \------- Neem_25545_f_2 [Azadirachta indica] (56)
|
| /------- Gh_D12G1734 [Gossypium hirsutum] (7)
| /---99--+
| | \------- Gorai.008G191200.1 [Gossypium raimondii] (67)
\------------------------100------------------------+
\--------------- Gh_A12G1594 [Gossypium hirsutum] (32)
|




