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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2997
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 105:
/----- Carubv10009894m [Capsella rubella] (2)
/-100+
| \----- Cagra.0909s0019.1.p [Capsella grandiflora] (44)
/-86-+
| \---------- Csa03g022220.1 [Camelina sativa] (41)
/--97-+
| | /----- Csa17g024170.1 [Camelina sativa] (31)
| \----89---+
/-99-+ \----- Csa14g023660.1 [Camelina sativa] (51)
| |
| \--------------------- Bostr.7128s0442.1.p [Boechera stricta] (39)
/-99-+
| | /----- AT1G18400.1 [Arabidopsis thaliana] (26)
| \---------82---------+
| \----- Araha.3597s0006.1.p [Arabidopsis halleri] (28)
|
| /--------------------- 676727278 [Sisymbrium irio] (4)
| |
| | /----- XP_013584176.1 [Brassica oleracea] (5)
/-52-+ | /-100+
| | | | \----- GSBRNA2T00044041001 [Brassica napus] (54)
| | /-97-+ |
| | | | /-100+---------- GSBRNA2T00034819001 [Brassica napus] (48)
| | | | | |
| | | | | \---------- XP_009149281.1 [Brassica rapa] (50)
| | | \-100-+
/------100------+ \-100+ | /----- Rsa1.0_00360.1_g00004.1 [Raphanus sativus] (47)
| | | \---100---+
| | | \----- RrC9679_p1 [Raphanus raphanistrum] (59)
| | |
| | \-------------------------- Tp1g16350 [Thellungiella parvula] (10)
| |
| | /----- Thhalv10008517m [Eutrema salsugineum] (13)
| \--------------52--------------+
| \----- KFK43999.1 [Arabis alpina] (46)
|
| /------------------------------------ KFK41823.1 [Arabis alpina] (3)
| |
| | /----- GSBRNA2T00082839001 [Brassica napus] (7)
| | /-95-+
| | | \----- XP_013619386.1 [Brassica oleracea] (8)
| | /---------100--------+
| | | | /----- XP_009128012.1 [Brassica rapa] (19)
| | | \-99-+
| /-86-+ | \----- GSBRNA2T00088013001 [Brassica napus] (55)
| | | |
| | | | /----- GSBRNA2T00103461001 [Brassica napus] (15)
| | | | |
| | | | |----- GSBRNA2T00058707001 [Brassica napus] (25)
| | | | /-100+
/-100+ | | | | |----- XP_013590557.1 [Brassica oleracea] (40)
| | | | | | |
| | | \-100+ /-80-+ \----- XP_009106040.1 [Brassica rapa] (63)
| | | | | |
| | | | /-100-+ \---------- RrC9086_p3 [Raphanus raphanistrum] (22)
| | | | | |
| | | | | \--------------- Rsa1.0_00939.1_g00015.1 [Raphanus sativus] (61)
| | | | |
| | | | | /----- RrC5921_p1 [Raphanus raphanistrum] (49)
| | | | /-92-+ /-100+
| | | | | | | \----- Rsa1.0_12047.1_g00001.1 [Raphanus sativus] (53)
| | | | | |----93----+
| | /-98-+ | | | \---------- Tp5g29030 [Thellungiella parvula] (57)
| | | | \-82-+ |
| | | | | \--------------------- 676751522 [Sisymbrium irio] (65)
| | | | |
| | | | \-------------------------- Thhalv10019010m [Eutrema salsugineum] (20)
| | | |
| | | | /----- Carubv10020802m [Capsella rubella] (6)
/-100+ | | | /---100---+
| | | | | | \----- Cagra.0876s0016.1.p [Capsella grandiflora] (58)
| | | | | |
| | | | | /--97-+ /----- Csa16g037700.1 [Camelina sativa] (17)
| | | | | | | /-100+
| | \--61-+ | | | | \----- Csa07g043020.1 [Camelina sativa] (33)
| | | | /-98-+ \-100+
| | | | | | \---------- Csa09g078400.1 [Camelina sativa] (34)
| | | | | |
| | | | | \--------------------- Bostr.3288s0027.1.p [Boechera stricta] (52)
| | | \------98------+
--91-+ | | | /----- Araha.2287s0004.1.p [Arabidopsis halleri] (14)
| | | | /-100+
| | | | | \----- 476520 [Arabidopsis lyrata] (16)
| | | \------100------+
| | | \---------- AT1G73830.1 [Arabidopsis thaliana] (27)
| | |
| | \---------------------------------------------- AA31G00559 [Aethionema arabicum] (11)
| |
| \--------------------------------------------------------- XP_010537453.1 [Tarenaya hassleriana] (62)
|
\-------------------------------------------------------------- Eucgr.B00731.1.p [Eucalyptus grandis] (37)
Root part of tree:
/------------------------------------------------------------------- Gh_A09G1589 [Gossypium hirsutum] (1)
|
|------------------------------------------------------------------- Cotton_A_34289_BGI-A2_v1.0 [Gossypium arboreum] (56)
|
| /------------------------------ (105)
| |
| | /------- orange1.1g024653m [Citrus sinensis] (18)
| | /--100--+
| /--56--+ | \------- Ciclev10024155m [Citrus clementina] (21)
| | | /--100-+
| | | | | /------- Neem_27763_f_1 [Azadirachta indica] (24)
| | | | \--100--+
| /--100--+ \---99--+ \------- Neem_16026_f_1 [Azadirachta indica] (64)
| | | |
| | | \---------------------- Eucgr.K02229.1.p [Eucalyptus grandis] (23)
| | |
+ | \------------------------------------- evm.model.supercontig_3.503 [Carica papaya] (32)
| |
| | /------- Gh_D07G0665 [Gossypium hirsutum] (9)
| | /--100--+
| /--89--+ | \------- Gorai.001G074900.1 [Gossypium raimondii] (12)
| | | /--84--+
| | | | \--------------- Gh_A07G0598 [Gossypium hirsutum] (38)
| | | /--100--+
| | | | \---------------------- Cotton_A_29988_BGI-A2_v1.0 [Gossypium arboreum] (45)
| | | |
| | | | /------- Gorai.006G060400.1 [Gossypium raimondii] (35)
| /--100--+ \------93------+ /---93--+
| | | | | \------- Gh_D09G0484 [Gossypium hirsutum] (43)
| | | | |
| | | \------100-----+--------------- Gh_A09G0477 [Gossypium hirsutum] (36)
| | | |
\--98--+ | \--------------- Cotton_A_36849_BGI-A2_v1.0 [Gossypium arboreum] (60)
| |
| \---------------------------------------------------- Thecc1EG012362t1 [Theobroma cacao] (29)
|
| /------- Gorai.006G194500.1 [Gossypium raimondii] (30)
\-------------------------96-------------------------+
\------- Gh_D09G1679 [Gossypium hirsutum] (42)
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