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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM2999
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 116:
/---------- AT1G21910.1 [Arabidopsis thaliana] (3)
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/-------93------+ /----- Araha.7024s0004.1.p [Arabidopsis halleri] (4)
| \-100+
| \----- 472427 [Arabidopsis lyrata] (43)
|
| /----- Cagra.2306s0038.1.p [Capsella grandiflora] (20)
| /---100---+
/-96-+ | \----- Carubv10010179m [Capsella rubella] (57)
| | |
| | /--96-+ /---------- Csa17g028700.1 [Camelina sativa] (22)
| | | | |
| | | \-100+ /----- Csa03g025770.1 [Camelina sativa] (23)
/------------95-----------+ \-96-+ \-100+
| | | \----- Csa14g027120.1 [Camelina sativa] (59)
| | |
| | \--------------------- Bostr.12659s0041.1.p [Boechera stricta] (50)
| |
| \------------------------------- KFK44293.1 [Arabis alpina] (33)
|
| /----- Rsa1.0_00681.1_g00001.1 [Raphanus sativus] (5)
| /---100---+
| | \----- RrC2491_p2 [Raphanus raphanistrum] (37)
| |
| /-100-+ /----- GSBRNA2T00146501001 [Brassica napus] (26)
| | | /-100+
| | | | \----- XP_009106415.1 [Brassica rapa] (62)
| | \-100+
| /-57-+ | /----- GSBRNA2T00147907001 [Brassica napus] (41)
| | | \-100+
| | | \----- XP_013590338.1 [Brassica oleracea] (46)
| | |
| /-100+ \--------------------- 676715074 [Sisymbrium irio] (38)
| | |
| | |-------------------------- Tp5g32800 [Thellungiella parvula] (29)
| /-95-+ |
| | | \-------------------------- Thhalv10019045m [Eutrema salsugineum] (45)
| | |
| | \------------------------------- KFK42153.1 [Arabis alpina] (32)
| |
| | /-------------------------- Bostr.20129s0200.1.p [Boechera stricta] (12)
| /-100+ |
| | | | /----- Cagra.0096s0069.1.p [Capsella grandiflora] (18)
| | | | /---100---+
| | | | | \----- Carubv10020777m [Capsella rubella] (53)
| | | | |
| | \---100---+ /-100-+ /---------- Csa09g084440.1 [Camelina sativa] (42)
/-95-+ | | | | |
| | | | | \-100+ /----- Csa07g050320.1 [Camelina sativa] (47)
| | | | | \-100+
| | /-99-+ | | \----- Csa16g041830.1 [Camelina sativa] (48)
| | | | \-61-+
| | | | | /----- 476928 [Arabidopsis lyrata] (25)
| | | | | /-100+
| | | | | | \----- Araha.18004s0008.1.p [Arabidopsis halleri] (55)
| | | | \----100---+
| | | | \---------- AT1G77640.1 [Arabidopsis thaliana] (35)
| | | |
| | | \----------------------------------------- AA31G00205 [Aethionema arabicum] (66)
| | |
| | | /---------- Gh_D05G2222 [Gossypium hirsutum] (6)
| | | |
| | | | /----- Gh_A05G3751 [Gossypium hirsutum] (30)
| | | /-100+-89-+
| | | | | \----- Cotton_A_16110_BGI-A2_v1.0 [Gossypium arboreum] (51)
| | | | |
| | | /--74-+ \---------- Gorai.009G244500.1 [Gossypium raimondii] (60)
| | | | |
| | /--68-+ | \--------------- Thecc1EG035077t1 [Theobroma cacao] (65)
| | | | |
| | | | /-87-+ /----- Gh_A06G0359 [Gossypium hirsutum] (16)
| | | | | | /-100+
--75-+ | | | | | | \----- Cotton_A_16330_BGI-A2_v1.0 [Gossypium arboreum] (17)
| | | | | \----100---+
| | | | | | /----- Gh_D06G0389 [Gossypium hirsutum] (21)
| | | | | \-89-+
| | | | | \----- Gorai.010G048900.1 [Gossypium raimondii] (61)
| | | | |
| | | | | /---------- Eucgr.F04365.1.p [Eucalyptus grandis] (7)
| | | | /-100+ |
| | | | | |-------86------+ /----- Eucgr.F03772.1.p [Eucalyptus grandis] (31)
| \-96-+ | | | \-100+
| | | | | \----- EcC008532.20 [Eucalyptus camaldulensis] (44)
| | | | |
| | | | |-------------------------- evm.model.supercontig_36.41 [Carica papaya] (11)
| | \------93------+ |
| | | | /----- Ciclev10002294m [Citrus clementina] (40)
| | | \---------100--------+
| | | \----- orange1.1g039680m [Citrus sinensis] (54)
| | |
| | | /----- XP_010534661.1 [Tarenaya hassleriana] (52)
| | \------------95-----------+
| | \----- XP_010539636.1 [Tarenaya hassleriana] (58)
| |
| \---------------------------------------------------- AA39G00394 [Aethionema arabicum] (19)
|
\-------------------------------------------------------------- Thhalv10008639m [Eutrema salsugineum] (63)
Root part of tree:
/------------------------------------------------------------------- XP_009110164.1 [Brassica rapa] (1)
|
|------------------------------------------------------------------- GSBRNA2T00086119001 [Brassica napus] (56)
|
| /-------- XP_009115658.1 [Brassica rapa] (2)
| /---100--+
| | \-------- GSBRNA2T00081495001 [Brassica napus] (34)
| /--100--+
| | | /-------- XP_013584119.1 [Brassica oleracea] (9)
| | \---100--+
| /--100--+ \-------- GSBRNA2T00119294001 [Brassica napus] (15)
| | |
| | | /-------- RrC4949_p1 [Raphanus raphanistrum] (14)
| /---100--+ \-------100------+
| | | \-------- Rsa1.0_00067.1_g00001.1 [Raphanus sativus] (67)
| | |
+ | \--------------------------------- 676753914 [Sisymbrium irio] (10)
| |
| |------------------------------------------ (116)
| |
| /--100--+ /-------- XP_013597070.1 [Brassica oleracea] (8)
| | | /---100--+
| | | | \-------- GSBRNA2T00110040001 [Brassica napus] (36)
| | | /--100--+
| | | | | /-------- XP_009103276.1 [Brassica rapa] (49)
| | | | \---100--+
| /---100--+ \-------83-------+ \-------- GSBRNA2T00112249001 [Brassica napus] (64)
| | | |
| | | \------------------------- Tp1g19450 [Thellungiella parvula] (24)
| | |
| | | /-------- Rsa1.0_01668.1_g00003.1 [Raphanus sativus] (13)
\---99--+ \-------------------100-------------------+
| \-------- RrC651_p3 [Raphanus raphanistrum] (28)
|
| /-------- XP_013603645.1 [Brassica oleracea] (27)
\------------------------99------------------------+
\-------- GSBRNA2T00066650001 [Brassica napus] (39)
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