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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3004
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 107:
/----- GSBRNA2T00034871001 [Brassica napus] (2)
/---100---+
| \----- XP_009149243.1 [Brassica rapa] (51)
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/-100-+ /---------- GSBRNA2T00034870001 [Brassica napus] (25)
| | |
| \-100+ /----- XP_013613976.1 [Brassica oleracea] (35)
/-100+ \-100+
| | \----- GSBRNA2T00006479001 [Brassica napus] (43)
| |
/-100+ \--------------------- Rsa1.0_00533.1_g00018.1 [Raphanus sativus] (13)
| |
| \-------------------------- 676727202 [Sisymbrium irio] (34)
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| /----- GSBRNA2T00139656001 [Brassica napus] (4)
| /----94---+
/-98-+ | \----- XP_013601964.1 [Brassica oleracea] (53)
| | |
| | /-100-+ /----- XP_009110376.1 [Brassica rapa] (11)
| | | | /-90-+
| | | | | \----- GSBRNA2T00102965001 [Brassica napus] (58)
/-100+ \---100---+ \-94-+
| | | \---------- GSBRNA2T00074265001 [Brassica napus] (24)
| | |
| | \--------------------- RrC1476_p2 [Raphanus raphanistrum] (9)
/-100+ |
| | \------------------------------------ Tp1g15990 [Thellungiella parvula] (27)
| |
| \----------------------------------------- Thhalv10006969m [Eutrema salsugineum] (42)
|
| /----- Cagra.2175s0023.1.p [Capsella grandiflora] (14)
| /-100+
/-100-+ | \----- Carubv10008485m [Capsella rubella] (63)
| | /-100+
| | | | /----- Csa17g023690.1 [Camelina sativa] (44)
| | | \-100+
| | /-100-+ \----- Csa03g021740.1 [Camelina sativa] (46)
/-100+ | | |
| | \-----------100----------+ \--------------- Bostr.7128s0399.1.p [Boechera stricta] (64)
| | |
| | \--------------------- AT1G17920.1 [Arabidopsis thaliana] (16)
| |
| \---------------------------------------------------- AA39G00087 [Aethionema arabicum] (40)
|
| /----- EcC054892.60 [Eucalyptus camaldulensis] (5)
| /---------100--------+
| | \----- Eucgr.H00609.1.p [Eucalyptus grandis] (31)
| |
| | /----- Eucgr.F02903.1.p [Eucalyptus grandis] (7)
| /-72-+ /------100------+
| | | | \----- EcC055180.10 [Eucalyptus camaldulensis] (52)
| | | |
| | | | /----- Neem_19880_f_1 [Azadirachta indica] (32)
| | \-100+ /-100+
| | | | \----- Neem_9748_f_1 [Azadirachta indica] (59)
| | | /-100+
/-100+ | | | \---------- Ciclev10006467m [Citrus clementina] (41)
| | | \-100-+
| | | \--------------- Thecc1EG017892t1 [Theobroma cacao] (60)
| | /-83-+
| | | | /----- Gorai.008G293300.1 [Gossypium raimondii] (22)
| | | | /-98-+
| | | | | \----- Gh_D12G2590 [Gossypium hirsutum] (39)
| | | |---------100--------+
| | | | | /----- Cotton_A_01469_BGI-A2_v1.0 [Gossypium arboreum] (57)
| | | | \-100+
| | /-95-+ | \----- Gh_A12G2462 [Gossypium hirsutum] (62)
| | | | |
| | | | \------------------------------- Thecc1EG044944t1 [Theobroma cacao] (45)
--100+ | | |
| | | | /----- Neem_11530_f_2 [Azadirachta indica] (6)
| | /-100+ | /-100+
| | | | | | \----- Neem_28382_f_1 [Azadirachta indica] (61)
| | | | \-----------100-----------+
| | | | \---------- Ciclev10019153m [Citrus clementina] (17)
| \----87----+ |
| | \----------------------------------------- evm.model.supercontig_7.137 [Carica papaya] (18)
| |
| | /----- XP_010540042.1 [Tarenaya hassleriana] (26)
| \-------------------100------------------+
| \----- XP_010537520.1 [Tarenaya hassleriana] (38)
|
\-------------------------------------------------------------- AA31G00615 [Aethionema arabicum] (19)
Root part of tree:
/------------------------------------------------------------------- Rsa1.0_06168.1_g00001.1 [Raphanus sativus] (1)
|
| /------ GSBRNA2T00099502001 [Brassica napus] (8)
| /-100+
| | \------ XP_009104812.1 [Brassica rapa] (54)
|--------------------------100--------------------------+
| | /------ XP_013588523.1 [Brassica oleracea] (15)
| \-100+
| \------ GSBRNA2T00049089001 [Brassica napus] (37)
|
| /--------------------------------- (107)
| |
| | /------ Csa07g040550.1 [Camelina sativa] (3)
| | /-93-+
| | | \------ Csa09g077920.1 [Camelina sativa] (10)
| | /-100-+
| | | \----------- Csa16g036070.1 [Camelina sativa] (56)
| /--99-+ /-100+
| | | | | /------ Carubv10021491m [Capsella rubella] (21)
+ | | | \----100---+
| | | /-100-+ \------ Cagra.4894s0014.1.p [Capsella grandiflora] (36)
| | | | |
| | | | \---------------------- Bostr.10273s0021.1.p [Boechera stricta] (49)
| /-100-+ \-100+
| | | | /------ AT1G73360.1 [Arabidopsis thaliana] (50)
| | | \---------100---------+
| | | \------ Araha.38479s0007.1.p [Arabidopsis halleri] (55)
| /-100+ |
| | | \--------------------------------------- KFK41777.1 [Arabis alpina] (23)
| | |
| /--76-+ \--------------------------------------------- Thhalv10018189m [Eutrema salsugineum] (30)
| | |
| /-100+ \-------------------------------------------------- Tp5g28290 [Thellungiella parvula] (29)
| | |
| | \-------------------------------------------------------- 676751386 [Sisymbrium irio] (12)
| |
| | /------ GSBRNA2T00102644001 [Brassica napus] (20)
\-100-+ /-100+
| | \------ XP_009105998.1 [Brassica rapa] (65)
| /-100-+
| | | /------ GSBRNA2T00103415001 [Brassica napus] (28)
| | \-100+
\--------------------100--------------------+ \------ XP_013592873.1 [Brassica oleracea] (47)
|
| /------ RrC1605_p5 [Raphanus raphanistrum] (33)
\----100---+
\------ Rsa1.0_02683.1_g00005.1 [Raphanus sativus] (48)
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