![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM3008
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 116:
/----- RrC875_p3 [Raphanus raphanistrum] (2)
/-51-+
| \----- Rsa1.0_01811.1_g00005.1 [Raphanus sativus] (46)
/----100---+
| \---------- GSBRNA2T00119998001 [Brassica napus] (67)
|
| /---------- XP_013639359.1 [Brassica oleracea] (8)
/------59------+ |
| | /-70-+ /----- GSBRNA2T00005976001 [Brassica napus] (18)
| | | \-100+
| | | \----- XP_009124864.1 [Brassica rapa] (25)
| \-100-+
| | /----- Rsa1.0_09683.1_g00001.1 [Raphanus sativus] (21)
| \---100---+
| \----- RrC14130_p1 [Raphanus raphanistrum] (39)
|
/-91-+ /-------------------------- RrC23110_p1 [Raphanus raphanistrum] (3)
| | |
| | | /----- Rsa1.0_00055.1_g00053.1 [Raphanus sativus] (43)
| | | /-------97------+
| | /-100+ | \----- RrC15896_p2 [Raphanus raphanistrum] (48)
| | | | |
| | | | | /---------- XP_013625432.1 [Brassica oleracea] (44)
| | | \-73-+ |
| | | | /-100+ /----- GSBRNA2T00111892001 [Brassica napus] (56)
/-99-+ \-50-+ | | \-100+
| | | \-100-+ \----- GSBRNA2T00084442001 [Brassica napus] (63)
| | | |
| | | \--------------- XP_009134849.1 [Brassica rapa] (61)
| | |
| | \------------------------------- 676758678 [Sisymbrium irio] (57)
/-100-+ |
| | |----------------------------------------- Thhalv10021244m [Eutrema salsugineum] (42)
| | |
| | \----------------------------------------- Tp3g04570 [Thellungiella parvula] (58)
| |
| \---------------------------------------------- KFK37976.1 [Arabis alpina] (5)
|
| /----- Araha.24789s0002.1.p [Arabidopsis halleri] (4)
/-100+ /-100+
| | | \----- 477862 [Arabidopsis lyrata] (52)
| | /------100------+
| | | \---------- AT3G05690.1 [Arabidopsis thaliana] (53)
| | |
| | | /----- Csa15g007070.1 [Camelina sativa] (7)
| | | /-100+
| | | | \----- Csa19g008200.1 [Camelina sativa] (24)
| \-----------100-----------+ /-100+
/-100+ | | \---------- Csa01g006590.1 [Camelina sativa] (37)
| | | /-100-+
| | | | | /----- Cagra.2108s0005.1.p [Capsella grandiflora] (29)
| | | | \---100---+
| | \-100+ \----- Carubv10014086m [Capsella rubella] (40)
| | |
| | \--------------------- Bostr.2570s0105.1.p [Boechera stricta] (31)
| |
| \--------------------------------------------------------- AA10G00050 [Aethionema arabicum] (6)
|
| /----- Ciclev10012232m [Citrus clementina] (9)
| /-100+
| | \----- orange1.1g021081m [Citrus sinensis] (35)
| /-----------100-----------+
| | | /----- Neem_9117_f_3 [Azadirachta indica] (14)
| | \-100+
| | \----- Neem_29677_f_1 [Azadirachta indica] (65)
| |
| | /---------- Gorai.009G394400.1 [Gossypium raimondii] (13)
--100+ | |
| | /-100+ /----- Cotton_A_16018_BGI-A2_v1.0 [Gossypium arboreum] (26)
| | | \-100+
| | /--72-+ \----- Gh_A04G0462 [Gossypium hirsutum] (32)
| | | |
| | | \--------------- Thecc1EG022984t1 [Theobroma cacao] (62)
| | |
| /-100+ | /----- Cotton_A_29133_BGI-A2_v1.0 [Gossypium arboreum] (15)
| | | | /-78-+
| | | /-100+ | \----- Gh_A11G2828 [Gossypium hirsutum] (45)
| | | | | /-100+
| | | | | | | /----- Gh_D11G3183 [Gossypium hirsutum] (38)
| | | | | | \-100+
| | | | | | \----- Gorai.007G363800.1 [Gossypium raimondii] (51)
| | | | \--98-+
| | | /-87-+ | /---------- Gh_A01G1710 [Gossypium hirsutum] (19)
| | | | | | |
| | | | | \-100+ /----- Gorai.002G234400.1 [Gossypium raimondii] (30)
\---------100--------+ | | | \-100+
| | | | \----- Gh_D01G1961 [Gossypium hirsutum] (49)
| \-98-+ |
| | \-------------------------- evm.model.supercontig_104.9 [Carica papaya] (22)
| |
| | /----- Eucgr.A02570.1.p [Eucalyptus grandis] (20)
| \------------99-----------+
| \----- Eucgr.K01921.1.p [Eucalyptus grandis] (41)
|
| /----- XP_010557970.1 [Tarenaya hassleriana] (28)
\-----------------99----------------+
\----- XP_010543859.1 [Tarenaya hassleriana] (33)
Root part of tree:
/------------------------------------------------------------------- Bostr.13129s0320.1.p [Boechera stricta] (1)
|
| /------- Csa13g008530.1 [Camelina sativa] (23)
| |
| /--100--+------- Csa08g057960.1 [Camelina sativa] (34)
| | |
| | \------- Csa20g008810.1 [Camelina sativa] (50)
|------------------------100------------------------+
| | /------- Cagra.2117s0012.1.p [Capsella grandiflora] (27)
| \--100--+
| \------- Carubv10001713m [Capsella rubella] (64)
|
| /---------------------------------------------------- (116)
| |
+ | /------- GSBRNA2T00136206001 [Brassica napus] (11)
| | /--100--+
| | | \------- XP_009122255.1 [Brassica rapa] (54)
| | /--100-+
| | | | /------- GSBRNA2T00107041001 [Brassica napus] (16)
| | | \---97--+
| /--100--+ /--100--+ \------- XP_013609327.1 [Brassica oleracea] (55)
| | | | |
| | | | | /------- RrC2321_p3 [Raphanus raphanistrum] (59)
| | | /--100-+ \------100-----+
| | | | | \------- Rsa1.0_00553.1_g00014.1 [Raphanus sativus] (60)
| | | | |
| | | /--100--+ \------------------------------ 676732558 [Sisymbrium irio] (47)
\--98--+ | | |
| \--95--+ \------------------------------------- Tp6g36350 [Thellungiella parvula] (17)
| |
| \--------------------------------------------- Thhalv10014346m [Eutrema salsugineum] (66)
|
| /--------------- AT5G06510.1 [Arabidopsis thaliana] (10)
| |
\---------------------100--------------------+ /------- Araha.26186s0008.1.p [Arabidopsis halleri] (12)
\--100--+
\------- 908579 [Arabidopsis lyrata] (36)
|




