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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3015
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 120:
/----- Rsa1.0_00149.1_g00016.1 [Raphanus sativus] (3)
/---100---+
| \----- RrC11758_p1 [Raphanus raphanistrum] (37)
|
/-100-+ /----- XP_009144919.1 [Brassica rapa] (4)
| | /-100+
| | | \----- GSBRNA2T00043369001 [Brassica napus] (58)
| \-100+
/----95---+ | /----- GSBRNA2T00058888001 [Brassica napus] (38)
| | \-100+
| | \----- XP_013585111.1 [Brassica oleracea] (61)
| |
| \--------------------- Tp1g37920 [Thellungiella parvula] (11)
|
| /--------------------- 676714748 [Sisymbrium irio] (5)
| |
| | /----- XP_009147777.1 [Brassica rapa] (6)
| | /-100+
|----53---+ | \----- GSBRNA2T00025242001 [Brassica napus] (60)
| | /-100+
| | | | /----- XP_013590962.1 [Brassica oleracea] (63)
| | | \-100+
| \-100-+ \----- GSBRNA2T00025976001 [Brassica napus] (65)
| |
| | /----- Rsa1.0_01802.1_g00004.1 [Raphanus sativus] (15)
/-100+ \---100---+
| | \----- RrC3812_p1 [Raphanus raphanistrum] (31)
| |
| | /----- Araha.20205s0001.1.p [Arabidopsis halleri] (12)
| | /-99-+
| | | \----- 892081 [Arabidopsis lyrata] (35)
| | /-100+
| | | \---------- AT1G51190.1 [Arabidopsis thaliana] (22)
| | |
| | /--57-+--------------- Bostr.26675s0071.1.p [Boechera stricta] (19)
| | | |
| | /-54-+ \--------------- KFK35872.1 [Arabis alpina] (47)
| | | |
/----78---+ | | \--------------------- Thhalv10011353m [Eutrema salsugineum] (29)
| | | |
| | | | /----- Csa03g058080.1 [Camelina sativa] (17)
| | \-65-+ /-92-+
| | | | \----- Csa17g089940.1 [Camelina sativa] (67)
| | | /-100+
| | | | \---------- Csa14g059520.1 [Camelina sativa] (42)
| | \----99----+
| | | /----- Carubv10012248m [Capsella rubella] (43)
| | \---100---+
| | \----- Cagra.2093s0009.1.p [Capsella grandiflora] (53)
| |
| \------------------------------------ AA2G00186 [Aethionema arabicum] (14)
|
| /----- Cotton_A_23598_BGI-A2_v1.0 [Gossypium arboreum] (7)
| /-100+
| | \----- Gh_A07G1138 [Gossypium hirsutum] (56)
| /-100+
| | | /----- Gorai.001G140000.1 [Gossypium raimondii] (36)
| | \-55-+
| | \----- Gh_D07G1235 [Gossypium hirsutum] (57)
| /-100-+
/-100-+ | | /----- Gorai.006G129400.1 [Gossypium raimondii] (24)
| | | | /-100+
| | | | | \----- Gh_D09G1085 [Gossypium hirsutum] (32)
| | | \-100+
| | /-100+ | /----- Cotton_A_01831_BGI-A2_v1.0 [Gossypium arboreum] (39)
| | | | \-100+
| | | | \----- Gh_A09G1077 [Gossypium hirsutum] (46)
| | | |
| | | \--------------------- Thecc1EG040576t1 [Theobroma cacao] (16)
| | |
| | /-95-+ /----- Neem_8648_f_1 [Azadirachta indica] (20)
| | | | /-100+
| | | | | \----- Neem_20155_f_1 [Azadirachta indica] (49)
/-100+ | | | /-100+
| | | | | | | /----- orange1.1g041657m [Citrus sinensis] (21)
| | | /-100+ | | \-100+
| | | | | \----80----+ \----- Ciclev10014809m [Citrus clementina] (66)
| | | | | |
| | | | | \--------------- evm.model.supercontig_84.82 [Carica papaya] (25)
| | | /-78-+ |
| | | | | \------------------------------- Eucgr.J00792.1.p [Eucalyptus grandis] (44)
/-68-+ | | | |
| | | \-100+ \------------------------------------ XP_010544229.1 [Tarenaya hassleriana] (28)
| | | |
| | | \----------------------------------------- XP_010545572.1 [Tarenaya hassleriana] (51)
| | |
| | \---------------------------------------------------- AA26G00748 [Aethionema arabicum] (45)
| |
| | /----- Thhalv10020382m [Eutrema salsugineum] (55)
| \-------------------------91------------------------+
| \----- Tp3g18860 [Thellungiella parvula] (62)
|
| /----- GSBRNA2T00122353001 [Brassica napus] (8)
| /-100+
| | \----- XP_013585217.1 [Brassica oleracea] (23)
| /-100+
| | | /----- XP_009145544.1 [Brassica rapa] (13)
| | \-97-+
--100+ /--99-+ \----- GSBRNA2T00009262001 [Brassica napus] (54)
| | |
| | \--------------- 676794162 [Sisymbrium irio] (41)
| |
| | /----- GSBRNA2T00077645001 [Brassica napus] (10)
|-------------------100------------------+ /-100+
| | | \----- XP_013589373.1 [Brassica oleracea] (27)
| | /-64-+
| | | | /----- GSBRNA2T00022850001 [Brassica napus] (18)
| | | \-99-+
| \-100-+ \----- XP_009110086.1 [Brassica rapa] (34)
| |
| | /----- Rsa1.0_00005.1_g00002.1 [Raphanus sativus] (50)
| \---100---+
| \----- RrC1442_p1 [Raphanus raphanistrum] (64)
|
\-------------------------------------------------------------- KFK39402.1 [Arabis alpina] (30)
Root part of tree:
/------------------------------------------------------------------- Carubv10015558m [Capsella rubella] (1)
|
|------------------------------------------------------------------- Cagra.10399s0013.1.p [Capsella grandiflora] (26)
|
| /-------------------------------------------------- Bostr.19424s0566.1.p [Boechera stricta] (2)
| |
+ |-------------------------------------------------- (120)
| |
| | /----------------- Csa19g028820.1 [Camelina sativa] (9)
| | |
| |---------------100--------------+----------------- Csa01g023920.1 [Camelina sativa] (40)
\-------100------+ |
| \----------------- Csa15g031200.1 [Camelina sativa] (48)
|
| /----------------- Araha.6726s0001.1.p [Arabidopsis halleri] (33)
| /-------73------+
| | \----------------- 898520 [Arabidopsis lyrata] (59)
\-------100------+
\--------------------------------- AT3G20840.1 [Arabidopsis thaliana] (52)
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