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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3042
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 114:
/----------------------------------------- KFK32666.1 [Arabis alpina] (3)
|
| /----- XP_013600769.1 [Brassica oleracea] (4)
| /-100+
| | \----- GSBRNA2T00127322001 [Brassica napus] (7)
| /-100+
| | | /----- GSBRNA2T00057325001 [Brassica napus] (40)
| | \-100+
| /-100-+ \----- XP_009117141.1 [Brassica rapa] (59)
| | |
| | | /----- Rsa1.0_08862.1_g00001.1 [Raphanus sativus] (28)
| /-100+ \---100---+
| | | \----- RrC11779_p1 [Raphanus raphanistrum] (57)
| | |
| | \--------------------- 676768036 [Sisymbrium irio] (16)
| |
/-100+ /-99-+ /--------------------- Tp4g03250 [Thellungiella parvula] (10)
| | | | |
| | | | | /----- XP_009140529.1 [Brassica rapa] (14)
| | | | | /-100+
| | | \-100+ | \----- GSBRNA2T00083304001 [Brassica napus] (37)
| | | | /-100+
| | /-100+ | | | /----- GSBRNA2T00012206001 [Brassica napus] (48)
| | | | | | \-98-+
| | | | \-100-+ \----- XP_013634445.1 [Brassica oleracea] (58)
| | | | |
| | | | \--------------- RrC23588_p1 [Raphanus raphanistrum] (53)
| | | |
| | | \------------------------------- Thhalv10000220m [Eutrema salsugineum] (54)
| | |
| | | /----- Csa16g045900.1 [Camelina sativa] (31)
/--87-+ | | /-70-+
| | \-99-+ | \----- Csa07g054160.1 [Camelina sativa] (60)
| | | /-100+
| | | | \---------- Csa09g088420.1 [Camelina sativa] (52)
| | | /--95-+
| | | | | /----- Carubv10023532m [Capsella rubella] (33)
| | | | \---100---+
| | | /-95-+ \----- Cagra.4091s0032.1.p [Capsella grandiflora] (63)
| | | | |
| | | | | /----- AT2G24260.1 [Arabidopsis thaliana] (50)
| | \---100---+ \-------60------+
| | | \----- 481281 [Arabidopsis lyrata] (51)
| | |
| | \-------------------------- Bostr.27895s0056.1.p [Boechera stricta] (42)
| |
| \---------------------------------------------- AA22G00101 [Aethionema arabicum] (45)
|
| /----- GSBRNA2T00039964001 [Brassica napus] (5)
| /-99-+
| | \----- XP_009127366.1 [Brassica rapa] (12)
| /-78-+
| | | /----- RrC43_p17 [Raphanus raphanistrum] (27)
| | \-100+
| /-100-+ \----- Rsa1.0_00356.1_g00004.1 [Raphanus sativus] (47)
/-98-+ | |
| | /-100+ \--------------- XP_013636451.1 [Brassica oleracea] (18)
| | | |
| | /-99-+ \--------------------- GSBRNA2T00130395001 [Brassica napus] (38)
| | | |
| | /-70-+ \-------------------------- 676758518 [Sisymbrium irio] (9)
| | | |
| | | \------------------------------- Tp7g28850 [Thellungiella parvula] (32)
| | |
| | | /----- Cagra.0380s0028.1.p [Capsella grandiflora] (17)
| | | /---100---+
| | | | \----- Carubv10005248m [Capsella rubella] (44)
| | | |
| | | |--------------- Bostr.7867s0954.1.p [Boechera stricta] (22)
| | | /--99-+
| | | | | /---------- Csa10g011520.1 [Camelina sativa] (30)
/-100+ | /-100+ | | |
| | | | | | \-97-+ /----- Csa12g016130.1 [Camelina sativa] (46)
| | | | |------100-----+ \-98-+
| | | | | | \----- Csa11g012380.1 [Camelina sativa] (56)
| | | | | |
| | | | | | /----- 491651 [Arabidopsis lyrata] (35)
| | | | | \------100------+
| | \----100---+ | \----- AT4G30980.1 [Arabidopsis thaliana] (49)
| | | |
| | | |------------------------------------ KFK29682.1 [Arabis alpina] (19)
| | | |
| | | \------------------------------------ Thhalv10025656m [Eutrema salsugineum] (39)
--57-+ | |
| | \----------------------------------------- AA167G00002 [Aethionema arabicum] (62)
| |
| | /----- XP_010525813.1 [Tarenaya hassleriana] (6)
| \------------------------100------------------------+
| \----- XP_010548502.1 [Tarenaya hassleriana] (34)
|
| /---------- Neem_18362_f_1 [Azadirachta indica] (23)
| |
| /-95-+ /----- orange1.1g012156m [Citrus sinensis] (25)
| | \-100+
\----------------------94----------------------+ \----- Ciclev10008192m [Citrus clementina] (26)
|
\--------------- Neem_2732_f_1 [Azadirachta indica] (36)
Root part of tree:
/------------------------------------------------------------------- Cotton_A_01249_BGI-A2_v1.0 [Gossypium arboreum] (1)
|
| /---------- Eucgr.C02592.1.p [Eucalyptus grandis] (2)
| /---100--+
| | \---------- EcC044554.10 [Eucalyptus camaldulensis] (55)
| /--------100-------+
| | \------------------- Eucgr.C00360.1.p [Eucalyptus grandis] (24)
| |
| | /---------- Gh_D06G1019 [Gossypium hirsutum] (11)
| /----57---+ /--------100-------+
| | | | \---------- Gorai.010G112200.1 [Gossypium raimondii] (15)
| | | |
| | \---100--+ /---------- Cotton_A_32829_BGI-A2_v1.0 [Gossypium arboreum] (13)
| | | /---51---+
+ /---97---+ | | \---------- Cotton_A_32830_BGI-A2_v1.0 [Gossypium arboreum] (29)
| | | \----95---+
| | | \------------------- Gh_A06G0872 [Gossypium hirsutum] (43)
| | |
|---100---+ | /---------- (114)
| | \------------------57-----------------+
| | \---------- evm.TU.contig_30708.1 [Carica papaya] (61)
| |
| \--------------------------------------------------------- Thecc1EG037077t1 [Theobroma cacao] (21)
|
| /---------- Gorai.009G055200.1 [Gossypium raimondii] (8)
| /---100--+
| | \---------- Gh_D05G0534 [Gossypium hirsutum] (41)
\-----------------------82----------------------+
\------------------- Gh_A05G0416 [Gossypium hirsutum] (20)
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