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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM306
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 334:
/----- Csa12g081560.1 [Camelina sativa] (2)
/-99-+
| \----- Csa10g046680.1 [Camelina sativa] (183)
/-99-+
| \---------- Csa11g055880.1 [Camelina sativa] (121)
/-86-+
| | /----- Carubv10006906m [Capsella rubella] (39)
| \---100---+
/-66-+ \----- Cagra.5905s0003.1.p [Capsella grandiflora] (137)
| |
| | /----- AT5G39820.1 [Arabidopsis thaliana] (64)
/-52-+ \------77------+
| | \----- 860234 [Arabidopsis lyrata] (196)
| |
| \------------------------- Bostr.10058s0013.1.p [Boechera stricta] (66)
|
|------------------------------ Thhalv10027860m [Eutrema salsugineum] (25)
|
|------------------------------ Csa33192s010.1 [Camelina sativa] (28)
|
| /----- 676729964 [Sisymbrium irio] (49)
|-----------50-----------+
| \----- Tp7g02250 [Thellungiella parvula] (85)
|
| /----- GSBRNA2T00098539001 [Brassica napus] (76)
/---------72---------+ /-100+
| | | \----- XP_009125115.1 [Brassica rapa] (95)
| | /-72-+
| | | | /----- XP_013589257.1 [Brassica oleracea] (188)
| | | \-98-+
| |------53------+ \----- GSBRNA2T00049808001 [Brassica napus] (197)
| | |
| | | /----- Rsa1.0_03533.1_g00002.1 [Raphanus sativus] (150)
| | \---100---+
| | \----- RrC29129_p1 [Raphanus raphanistrum] (163)
| |
| |------------------------------ AA9G00047 [Aethionema arabicum] (148)
| |
| \------------------------------ XP_010554003.1 [Tarenaya hassleriana] (200)
|
| /----- Gh_D13G0769 [Gossypium hirsutum] (4)
| /-56-+
| | \----- Gorai.013G085000.1 [Gossypium raimondii] (60)
| /-50-+
| | | /----- Gh_A13G0655 [Gossypium hirsutum] (37)
| | \-90-+
| /-95-+ \----- Cotton_A_39298_BGI-A2_v1.0 [Gossypium arboreum] (166)
| | |
| | \--------------- Gh_Sca085262G01 [Gossypium hirsutum] (36)
| |
| /-59-+ /---------- Gh_A03G0874 [Gossypium hirsutum] (19)
| | | |
| | | | /----- Gh_D02G1257 [Gossypium hirsutum] (81)
| | \----97---+-92-+
|------------80-----------+ | \----- Gorai.005G141200.1 [Gossypium raimondii] (162)
| | |
| | \---------- Cotton_A_36695_BGI-A2_v1.0 [Gossypium arboreum] (179)
| |
| \------------------------- Thecc1EG011718t1 [Theobroma cacao] (147)
|
| /----- Gh_A09G0159 [Gossypium hirsutum] (7)
| /-100+
| | \----- Cotton_A_30603_BGI-A2_v1.0 [Gossypium arboreum] (128)
| /-100+
| | | /----- Gorai.006G017700.1 [Gossypium raimondii] (50)
| | \-98-+
| | \----- Gh_D09G0151 [Gossypium hirsutum] (124)
| /-63-+
| | | /----- Gorai.012G054800.1 [Gossypium raimondii] (32)
| | | /-99-+
| | | | \----- Gh_D04G0450 [Gossypium hirsutum] (171)
|--------------68--------------+ \-100+
| | \---------- Cotton_A_19848_BGI-A2_v1.0 [Gossypium arboreum] (33)
| |
| \-------------------- Thecc1EG018508t1 [Theobroma cacao] (141)
|
| /--------------- 676715366 [Sisymbrium irio] (9)
| |
| | /----- Rsa1.0_02564.1_g00005.1 [Raphanus sativus] (13)
| /------83------+ /-100+
| | | | \----- RrC6989_p1 [Raphanus raphanistrum] (131)
| | \-96-+
| | | /----- XP_013585218.1 [Brassica oleracea] (159)
| | \-100+
| | \----- XP_009115419.1 [Brassica rapa] (182)
| |
| | /----- GSBRNA2T00045496001 [Brassica napus] (16)
| | /-100+
| | | \----- XP_013603948.1 [Brassica oleracea] (119)
| | /-97-+
| | | | /----- XP_009110048.1 [Brassica rapa] (120)
| | | \-100+
| | | \----- GSBRNA2T00083984001 [Brassica napus] (112)
| |------61------+
| | |--------------- RrC19533_p1 [Raphanus raphanistrum] (161)
| | |
| | \--------------- Rsa1.0_01450.1_g00013.1 [Raphanus sativus] (184)
| |
| /--74-+ /------------------------- Csa14g031790.1 [Camelina sativa] (47)
| | | |
| | | | /----- Csa03g028620.1 [Camelina sativa] (56)
| | | | /-96-+
/-63-+ | | | | \----- Csa17g033960.1 [Camelina sativa] (117)
| | | | | /-82-+
| | | |-53-+ | | /----- Carubv10011253m [Capsella rubella] (180)
| | | | | | \-100+
| | | | | /-80-+ \----- Cagra.1150s0013.1.p [Capsella grandiflora] (143)
| | | | | | |
| | /-57-+ | | | \--------------- Bostr.12659s0312.1.p [Boechera stricta] (129)
| | | | | \-62-+
| | | | | | /----- AT1G26870.1 [Arabidopsis thaliana] (149)
| | | | | \------95------+
| | | | | \----- 335709 [Arabidopsis lyrata] (178)
| | | | |
| | | | |------------------------------ Tp1g21900 [Thellungiella parvula] (110)
| | | | |
| | | | \------------------------------ Thhalv10007709m [Eutrema salsugineum] (152)
| | | |
| | | \------------------------------------ AA39G00617 [Aethionema arabicum] (40)
| | |
| | | /----- GSBRNA2T00101917001 [Brassica napus] (26)
| | | /-100+
| | | | \----- XP_009105638.1 [Brassica rapa] (67)
| | /-56-+ /-95-+
| | | | | | /----- GSBRNA2T00112879001 [Brassica napus] (70)
| | | | | \-100+
| | | | /-95-+ \----- XP_013589625.1 [Brassica oleracea] (151)
| | | | | |
| | | | | | /----- Rsa1.0_00170.1_g00016.1 [Raphanus sativus] (170)
| | | | /-86-+ \---100---+
| | | | | | \----- RrC872_p2 [Raphanus raphanistrum] (167)
| | | | | |
| | | | /-95-+ \-------------------- 676720854 [Sisymbrium irio] (43)
| | | | | |
| | | | | \------------------------- Tp5g24760 [Thellungiella parvula] (72)
| | | | |
| | | | | /------------------------- Thhalv10019631m [Eutrema salsugineum] (45)
| | | \----86----+ |
| |-74-+ | | /---------- Csa05g086390.1 [Camelina sativa] (55)
| | | | | |
| | | | | /-98-+ /----- Csa16g031130.1 [Camelina sativa] (75)
| | | \-85-+ | \-97-+
| | | | | \----- Csa07g036390.1 [Camelina sativa] (150)
| | | | /-99-+
| | | | | | /----- Cagra.8367s0003.1.p [Capsella grandiflora] (125)
| | | | | \---100---+
| | | \-86-+ \----- Carubv10021514m [Capsella rubella] (144)
| | | |
| | | \-------------------- Bostr.10273s0400.1.p [Boechera stricta] (164)
| | |
| | |---------------------------------------------- XP_010552578.1 [Tarenaya hassleriana] (35)
| | |
| | \---------------------------------------------- XP_010551540.1 [Tarenaya hassleriana] (98)
| |
| | /----- Ciclev10011891m [Citrus clementina] (10)
| | /-100+
| | | \----- orange1.1g015827m [Citrus sinensis] (100)
| |-------------------56-------------------+
| | | /----- Neem_11660_f_5 [Azadirachta indica] (92)
| | \-100+
| | \----- Neem_27137_f_3 [Azadirachta indica] (186)
| |
| | /----- Neem_15575_f_1 [Azadirachta indica] (34)
| | /-100+
| | | \----- Neem_39628_f_1 [Azadirachta indica] (189)
| |-------------------95-------------------+
| | | /----- Ciclev10031623m [Citrus clementina] (176)
| | \-100+
| | \----- orange1.1g047852m [Citrus sinensis] (194)
| |
| |--------------------------------------------------- Eucgr.I01940.1.p [Eucalyptus grandis] (88)
| |
| |--------------------------------------------------- evm.model.supercontig_14.2 [Carica papaya] (130)
| |
| |--------------------------------------------------- evm.model.supercontig_128.20 [Carica papaya] (113)
| |
| |--------------------------------------------------- EcC039244.20 [Eucalyptus camaldulensis] (114)
| |
| | /----- EcC051253.10 [Eucalyptus camaldulensis] (126)
| \---------------------100---------------------+
| \----- Eucgr.G02506.1.p [Eucalyptus grandis] (187)
|
| /----- GSBRNA2T00045062001 [Brassica napus] (5)
| /-99-+
| | \----- XP_009142151.1 [Brassica rapa] (199)
| /-100+
| | | /----- XP_013634618.1 [Brassica oleracea] (94)
| | \-100+
| | \----- GSBRNA2T00084755001 [Brassica napus] (133)
| /-90-+
| | | /----- RrC14646_p1 [Raphanus raphanistrum] (14)
| | | /-61-+
| | | | \----- Rsa1.0_55877.1_g00001.1 [Raphanus sativus] (185)
| | \-90-+
| | | /----- Rsa1.0_15651.1_g00001.1 [Raphanus sativus] (140)
| | \-59-+
| | \----- Rsa1.0_09028.1_g00001.1 [Raphanus sativus] (198)
| /----70---+
| | | /----- XP_009133561.1 [Brassica rapa] (11)
| | | /-79-+
| | | | \----- GSBRNA2T00139105001 [Brassica napus] (111)
| | | /-87-+
| | | | | /----- GSBRNA2T00075489001 [Brassica napus] (65)
| | | | \-100+
| | \-83-+ \----- XP_013626851.1 [Brassica oleracea] (120)
| | |
| | | /----- Rsa1.0_02246.1_g00004.1 [Raphanus sativus] (78)
| | \----99---+
| | \----- RrC4606_p1 [Raphanus raphanistrum] (136)
| |
| | /----- XP_013634805.1 [Brassica oleracea] (23)
| /--67-+ /-100+
| | | | \----- GSBRNA2T00011138001 [Brassica napus] (142)
| | | /-100+
| | | | \---------- GSBRNA2T00016973001 [Brassica napus] (57)
| | | /-100+
/-81-+ | | | \--------------- XP_009142897.1 [Brassica rapa] (59)
| | | | /-100+
| | | | | | /----- Rsa1.0_17595.1_g00001.1 [Raphanus sativus] (99)
| | /-63-+ | | \------100-----+
| | | | |-93-+ \----- RrC5053_p2 [Raphanus raphanistrum] (127)
| | | | | |
| | | | | \------------------------- 676762560 [Sisymbrium irio] (118)
| | | | |
| | | | \------------------------------ Tp4g25130 [Thellungiella parvula] (174)
| | | |
| | | | /----- Thhalv10017054m [Eutrema salsugineum] (22)
| | | \--------------64--------------+
| | | \----- AA21G00088 [Aethionema arabicum] (177)
| | |
| | /-68-+ /----- Araha.0173s0016.1.p [Arabidopsis halleri] (12)
| | | | /-100+
| | | | | \----- 483400 [Arabidopsis lyrata] (30)
| | | | /-100+
| | | | | \---------- AT2G43000.1 [Arabidopsis thaliana] (173)
| | | | /-76-+
| | | | | \--------------- Bostr.25993s0479.1.p [Boechera stricta] (58)
| | | | |
| | | | | /----- Carubv10023730m [Capsella rubella] (80)
| | /-70-+ | |------100-----+
| | | | \---------69---------+ \----- Cagra.0202s0012.1.p [Capsella grandiflora] (83)
| | | | |
| | | | | /----- Csa06g049190.1 [Camelina sativa] (153)
| | | | | /-100+
| | | | | | \----- Csa04g060600.1 [Camelina sativa] (181)
| |-68-+ | \---100---+
| | | | \---------- Csa05g007460.1 [Camelina sativa] (193)
| | | |
| | | \---------------------------------------------- KFK37142.1 [Arabis alpina] (97)
| | |
| | \--------------------------------------------------- XP_010525613.1 [Tarenaya hassleriana] (134)
| |
| | /----- Gh_A04G0414 [Gossypium hirsutum] (18)
| | /-100+
| | | \----- Cotton_A_29358_BGI-A2_v1.0 [Gossypium arboreum] (130)
| | /---100---+
| | | | /----- Gh_D05G3221 [Gossypium hirsutum] (29)
| | | \-99-+
| | | \----- Gorai.009G357700.1 [Gossypium raimondii] (73)
| | |
| | | /----- Cotton_A_24794_BGI-A2_v1.0 [Gossypium arboreum] (24)
| | | /-97-+
| | /-59-+ | \----- Gh_A08G2057 [Gossypium hirsutum] (87)
| | | | |
| | | | /-100+---------- Gorai.004G270400.1 [Gossypium raimondii] (74)
| | | | | |
| | | | | \---------- Gh_D08G2671 [Gossypium hirsutum] (132)
| | | | |
| | | \-76-+ /----- Gh_D01G0278 [Gossypium hirsutum] (68)
| | /-64-+ | /-91-+
| | | | | | \----- Gorai.002G036700.1 [Gossypium raimondii] (180)
| | | | \-100+
| | | | | /----- Gh_A01G0267 [Gossypium hirsutum] (69)
| | | | \-51-+
| |------------76-----------+ | \----- Cotton_A_15893_BGI-A2_v1.0 [Gossypium arboreum] (135)
--54-+ | | |
| | | \------------------------- Thecc1EG032389t1 [Theobroma cacao] (46)
| | |
| | \------------------------------ Thecc1EG032393t1 [Theobroma cacao] (158)
| |
| | /----- Gh_D06G2096 [Gossypium hirsutum] (20)
| | /-85-+
| | | \----- Gorai.010G236700.1 [Gossypium raimondii] (90)
| | /-61-+
| | | \---------- Gh_A06G1947 [Gossypium hirsutum] (160)
| | /-100+
| | | \--------------- Cotton_A_05272_BGI-A2_v1.0 [Gossypium arboreum] (139)
| | |
| | |-------------------- Thecc1EG029321t1 [Theobroma cacao] (54)
| |-----------------71----------------+
| | | /----- Gh_D06G1546 [Gossypium hirsutum] (71)
| | | /-97-+
| | | | \----- Gorai.010G171100.1 [Gossypium raimondii] (86)
| | \---100---+
| | | /----- Gh_A06G1226 [Gossypium hirsutum] (91)
| | \-97-+
| | \----- Cotton_A_37610_BGI-A2_v1.0 [Gossypium arboreum] (115)
| |
| |-------------------------------------------------------- Eucgr.F01463.1.p [Eucalyptus grandis] (21)
| |
| | /----- orange1.1g046948m [Citrus sinensis] (27)
| | /-75-+
| | | \----- Ciclev10005465m [Citrus clementina] (165)
| | /-100+
| | | \---------- Ciclev10006695m [Citrus clementina] (195)
| |-------------------78-------------------+
| | \--------------- Neem_19267_f_1 [Azadirachta indica] (155)
| |
| | /----- Neem_585_f_6 [Azadirachta indica] (41)
| | /-100+
| | | \----- Neem_31069_f_2 [Azadirachta indica] (62)
| | /----85---+
| | | | /----- Ciclev10032203m [Citrus clementina] (84)
| | | \-100+
| | | \----- orange1.1g021785m [Citrus sinensis] (190)
| | |
| | | /----- Cotton_A_33158_BGI-A2_v1.0 [Gossypium arboreum] (52)
| |-----------------68----------------+ /-89-+
| | | | \----- Gh_A07G0739 [Gossypium hirsutum] (93)
| | | /-100+
| | | | | /----- Gorai.001G091900.1 [Gossypium raimondii] (190)
| | | | \-53-+
| | \-80-+ \----- Gh_D07G0802 [Gossypium hirsutum] (123)
| | |
| | \--------------- Thecc1EG001955t1 [Theobroma cacao] (168)
| |
| |-------------------------------------------------------- Eucgr.A02028.1.p [Eucalyptus grandis] (96)
| |
| |-------------------------------------------------------- Eucgr.K01228.1.p [Eucalyptus grandis] (160)
| |
| \-------------------------------------------------------- evm.model.supercontig_67.60 [Carica papaya] (157)
|
| /----- XP_010542556.1 [Tarenaya hassleriana] (42)
\---------------------------96--------------------------+
\----- XP_010552401.1 [Tarenaya hassleriana] (154)
Root part of tree:
/------------------------------------------------------------------ Cagra.5641s0055.1.p [Capsella grandiflora] (1)
|
|------------------------------------------------------------------ Carubv10014270m [Capsella rubella] (82)
|
| /----- (334)
| /-------------------72-------------------+
| | \----- AA26G00012 [Aethionema arabicum] (191)
| |
| | /------------------------------ Tp3g11050 [Thellungiella parvula] (3)
| | |
| | | /----- XP_009146571.1 [Brassica rapa] (6)
| | | /-100+
| | | | \----- GSBRNA2T00028217001 [Brassica napus] (138)
| | | /-100+
| | | | | /----- GSBRNA2T00023738001 [Brassica napus] (145)
| | | | \-100+
| | | /-100+ \----- XP_013585182.1 [Brassica oleracea] (169)
| | | | |
| | /--92-+ | | /----- Rsa1.0_00938.1_g00006.1 [Raphanus sativus] (79)
| | | | | \---100---+
| | | | | \----- RrC4162_p1 [Raphanus raphanistrum] (172)
| | | | |
| | | | /-69-+ /----- GSBRNA2T00026353001 [Brassica napus] (8)
| | | | | | /-89-+
| | | | | | | \----- XP_013611181.1 [Brassica oleracea] (51)
| | | | | | /-100+
| | | | | | | | /----- XP_009124687.1 [Brassica rapa] (48)
| | /-92-+ | | | | \-89-+
| /-90-+ | | \-94-+ \-100+ \----- GSBRNA2T00076462001 [Brassica napus] (140)
+ | | | | | |
| | | | | | | /----- Rsa1.0_04850.1_g00004.1 [Raphanus sativus] (17)
| | | | | | \---100---+
| | | | | | \----- RrC14644_p1 [Raphanus raphanistrum] (31)
| | | | | |
| | | | | \------------------------- 676724508 [Sisymbrium irio] (175)
| | | | |
| | |-90-+ \------------------------------------ Thhalv10021225m [Eutrema salsugineum] (156)
| | | |
| | | | /----- GSBRNA2T00042350001 [Brassica napus] (38)
| | | | /-100+
| | | | | \----- XP_013627414.1 [Brassica oleracea] (44)
| | | | /-100+
| /-98-+ | | | | /----- GSBRNA2T00137740001 [Brassica napus] (77)
| | | | | | \-100+
| | | | \------------99-----------+ \----- XP_009135261.1 [Brassica rapa] (122)
| | | | |
| | | | | /----- RrC2216_p1 [Raphanus raphanistrum] (53)
| | | | \---100---+
| | | | \----- Rsa1.0_00314.1_g00017.1 [Raphanus sativus] (170)
| | | |
| /-98-+ | \---------------------------------------------- KFK38633.1 [Arabis alpina] (192)
| | | |
| | | | /----- AT3G12910.1 [Arabidopsis thaliana] (89)
| | | | /-62-+
| | | | | \----- 478652 [Arabidopsis lyrata] (116)
| | | \-------------------100------------------+
| | | \---------- Araha.24857s0004.1.p [Arabidopsis halleri] (146)
\-100+ |
| \-------------------------------------------------------- Bostr.3640s0064.1.p [Boechera stricta] (110)
|
| /----- Csa01g014020.1 [Camelina sativa] (15)
| /-99-+
| | \----- Csa19g017110.1 [Camelina sativa] (63)
\------------------------100-----------------------+
\---------- Csa15g016850.1 [Camelina sativa] (61)
|
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