![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM3061
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 110:
/---------- AT1G77920.1 [Arabidopsis thaliana] (2)
|
/------100------+ /----- 877903 [Arabidopsis lyrata] (32)
| \-100+
| \----- Araha.10817s0004.1.p [Arabidopsis halleri] (63)
|
| /---------- Csa16g042150.1 [Camelina sativa] (22)
| |
/------100-----+ /-100+ /----- Csa07g050580.1 [Camelina sativa] (29)
| | | \-99-+
| | /--98-+ \----- Csa09g084700.1 [Camelina sativa] (30)
| | | |
| | | \--------------- Bostr.20129s0227.1.p [Boechera stricta] (27)
| \-100+
| | /----- Carubv10020476m [Capsella rubella] (25)
| \------100------+
| \----- Cagra.0096s0044.1.p [Capsella grandiflora] (60)
|
| /----- XP_009106436.1 [Brassica rapa] (4)
| /-100+
| | \----- GSBRNA2T00146482001 [Brassica napus] (51)
| /-100+
| | | /----- GSBRNA2T00147931001 [Brassica napus] (18)
| | \-100+
/-100+ /-100-+ \----- XP_013589879.1 [Brassica oleracea] (37)
| | | |
| | | | /----- Rsa1.0_07756.1_g00002.1 [Raphanus sativus] (14)
| | /-97-+ \----88---+
| | | | \----- RrC625_p2 [Raphanus raphanistrum] (49)
| | | |
| | | \--------------------- 676715014 [Sisymbrium irio] (19)
| | /-99-+
| | | | /----- XP_013588544.1 [Brassica oleracea] (12)
| | | | /-64-+
/-100-+ | | | | \----- GSBRNA2T00131848001 [Brassica napus] (65)
| | | | \------100------+
| | | /-100+ | /----- XP_009104596.1 [Brassica rapa] (13)
| | | | | \-100+
| | | | | \----- GSBRNA2T00099260001 [Brassica napus] (56)
| | \-94-+ |
| | | \------------------------------- Tp5g33070 [Thellungiella parvula] (66)
| | |
| | \------------------------------------ Thhalv10018715m [Eutrema salsugineum] (31)
| |
| \---------------------------------------------- AA31G00181 [Aethionema arabicum] (15)
|
| /----- Carubv10009423m [Capsella rubella] (5)
| /-100+
| | \----- Cagra.1707s0011.1.p [Capsella grandiflora] (38)
| /-100+
| | | /----- Csa03g025960.1 [Camelina sativa] (21)
| | \-100+
| | \----- Csa17g028970.1 [Camelina sativa] (50)
/-84-+ /--62-+
| | | | /---------- AT1G22070.1 [Arabidopsis thaliana] (20)
| | | | |
| | | \-100+ /----- 472441 [Arabidopsis lyrata] (47)
| | /------100-----+ \-100+
| | | | \----- Araha.7166s0001.1.p [Arabidopsis halleri] (48)
| | | |
| | | \--------------------- Bostr.12659s0060.1.p [Boechera stricta] (9)
| | |
| | | /----- GSBRNA2T00015686001 [Brassica napus] (8)
| | | /-100+
| | | | \----- XP_009145375.1 [Brassica rapa] (17)
| | | /-100+
| | | | \---------- XP_013637780.1 [Brassica oleracea] (64)
| | | /-100-+
| | | | \--------------- GSBRNA2T00065604001 [Brassica napus] (16)
| | | /-100+
| | | | | /----- RrC11353_p1 [Raphanus raphanistrum] (35)
| \------100------+ | \------100------+
| | | \----- Rsa1.0_01344.1_g00009.1 [Raphanus sativus] (54)
/-100+ | |
| | | | /----- RrC6274_p1 [Raphanus raphanistrum] (10)
| | | | /---100---+
| | | | | \----- Rsa1.0_01982.1_g00006.1 [Raphanus sativus] (53)
| | | | |
| | | |----100---+ /----- XP_009110151.1 [Brassica rapa] (23)
| | | /-100+ | /-100+
| | | | | | | \----- GSBRNA2T00073107001 [Brassica napus] (61)
| | | | | \-100+
| | | | | | /----- GSBRNA2T00066681001 [Brassica napus] (43)
| | | | | \-100+
--100+ | | | | \----- XP_013605403.1 [Brassica oleracea] (44)
| | \-69-+ |
| | | |-------------------------- Tp1g19580 [Thellungiella parvula] (28)
| | | |
| | | \-------------------------- 676753868 [Sisymbrium irio] (58)
| | |
| | \------------------------------- Thhalv10007944m [Eutrema salsugineum] (33)
| |
| \--------------------------------------------------------- XP_010521212.1 [Tarenaya hassleriana] (39)
|
\-------------------------------------------------------------- evm.model.supercontig_49.112 [Carica papaya] (34)
Root part of tree:
/------------------------------------------------------------------- Gorai.002G219800.1 [Gossypium raimondii] (1)
|
|------------------------------------------------------------------- Gh_D01G1881 [Gossypium hirsutum] (7)
|
| /-------------------------------------- (110)
| |
| | /------------------- Neem_8072_f_3 [Azadirachta indica] (6)
| | |
| /---100---+ /---100---+ /---------- Ciclev10004036m [Citrus clementina] (46)
| | | | \---100--+
| | | | \---------- orange1.1g036441m [Citrus sinensis] (57)
| | \---99---+
| | | /---------- EcC077050.10 [Eucalyptus camaldulensis] (52)
| | \--------100-------+
+ | \---------- Eucgr.F03732.1.p [Eucalyptus grandis] (55)
| |
| | /---------- Gh_D06G0357 [Gossypium hirsutum] (3)
| | /---100--+
| /---100--+ | \---------- Gorai.010G045700.1 [Gossypium raimondii] (24)
| | | /---100---+
| | | | | /---------- Cotton_A_18442_BGI-A2_v1.0 [Gossypium arboreum] (36)
| | | | \---100--+
| | | | \---------- Gh_A06G0329 [Gossypium hirsutum] (62)
| | | /---86---+
| | | | | /------------------- Gh_A02G0775 [Gossypium hirsutum] (26)
| | | | | |
| | | | | | /---------- Gh_D02G0824 [Gossypium hirsutum] (40)
\---100---+ | | \---100---+---98---+
| \----97---+ | \---------- Gorai.005G092400.1 [Gossypium raimondii] (42)
| | |
| | \------------------- Cotton_A_25482_BGI-A2_v1.0 [Gossypium arboreum] (41)
| |
| \-------------------------------------- Thecc1EG034993t1 [Theobroma cacao] (45)
|
| /---------- Gh_A01G1578 [Gossypium hirsutum] (11)
\----------------------80----------------------+
\---------- Cotton_A_23932_BGI-A2_v1.0 [Gossypium arboreum] (59)
|




