![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM3085
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 112:
/----- Carubv10009191m [Capsella rubella] (2)
/---100---+
| \----- Cagra.1508s0138.1.p [Capsella grandiflora] (33)
|
/--57-+ /----- Csa03g033900.1 [Camelina sativa] (3)
| | /-95-+
| | | \----- Csa14g038430.1 [Camelina sativa] (65)
/-100+ \-100+
| | \---------- Csa17g046010.1 [Camelina sativa] (7)
| |
| \--------------------- Bostr.15697s0365.1.p [Boechera stricta] (10)
/------100-----+
| | /----- 890619 [Arabidopsis lyrata] (6)
| | /-100+
| | | \----- Araha.9614s0016.1.p [Arabidopsis halleri] (43)
| \------100------+
| \---------- AT1G30650.1 [Arabidopsis thaliana] (24)
|
| /----- XP_013595932.1 [Brassica oleracea] (4)
| /-100+
| | \----- GSBRNA2T00105704001 [Brassica napus] (25)
| /-100+
| | | /----- XP_009144762.1 [Brassica rapa] (9)
| | \-100+
| /----100---+ \----- GSBRNA2T00128498001 [Brassica napus] (49)
| | |
/-100+ | | /----- RrC15227_p1 [Raphanus raphanistrum] (32)
| | | \---100---+
| | | \----- Rsa1.0_05834.1_g00003.1 [Raphanus sativus] (52)
| | |
| | | /----- XP_013584275.1 [Brassica oleracea] (20)
| | /-63-+ /-80-+
| | | | | \----- GSBRNA2T00031157001 [Brassica napus] (27)
| | | | /-100+
| | | | | \---------- XP_009124606.1 [Brassica rapa] (55)
| | | | /-100-+
/-100-+ | | | | | /----- Rsa1.0_00216.1_g00011.1 [Raphanus sativus] (38)
| | | /-100+ | | \---100---+
| | | | | \-100+ \----- RrC15157_p1 [Raphanus raphanistrum] (47)
| | | | | |
| | | | | \--------------------- 676727820 [Sisymbrium irio] (62)
| | \-93-+ |
/-100+ | | \------------------------------- Tp1g26550 [Thellungiella parvula] (30)
| | | |
| | | \------------------------------------ Thhalv10007691m [Eutrema salsugineum] (36)
| | |
| | \---------------------------------------------- KFK44871.1 [Arabis alpina] (48)
| |
| \---------------------------------------------------- AA30G00020 [Aethionema arabicum] (23)
|
| /----- 482446 [Arabidopsis lyrata] (11)
| /---------100--------+
| | \----- AT2G34830.1 [Arabidopsis thaliana] (26)
| |
| | /--------------- Carubv10023228m [Capsella rubella] (18)
| | |
| /------100-----+ | /----- Csa04g047110.1 [Camelina sativa] (41)
| | | /-100-+ /-100+
| | | | | | \----- Csa06g037310.1 [Camelina sativa] (45)
| | | | \-100+
| | \-100+ \---------- Csa05g020390.1 [Camelina sativa] (63)
| | |
| | \--------------------- Bostr.23794s0620.1.p [Boechera stricta] (29)
| |
| | /--------------- RrC11372_p1 [Raphanus raphanistrum] (14)
/-100+ | |
| | | | /----- XP_009143736.1 [Brassica rapa] (19)
| | | /-100-+ /-100+
| | | | | | \----- GSBRNA2T00087424001 [Brassica napus] (34)
| | | | \-100+
| | | | | /----- GSBRNA2T00007212001 [Brassica napus] (44)
| | /-88-+ /-99-+ \-100+
| | | | | | \----- XP_013634621.1 [Brassica oleracea] (58)
| | | | | |
| | | | | \--------------------- 676779768 [Sisymbrium irio] (37)
| | | | |
| | | | /-99-+ /----- XP_009141404.1 [Brassica rapa] (16)
| | | | | | /-100+
| | | | | | | \----- GSBRNA2T00076996001 [Brassica napus] (54)
| | | | | | /-100+
--100+ | | | | | | \---------- XP_013634561.1 [Brassica oleracea] (40)
| | /--97-+ | /-100+ \----100---+
| | | | | | | | /----- RrC8469_p1 [Raphanus raphanistrum] (50)
| | | | | | | \---100---+
| | | | | | | \----- Rsa1.0_11839.1_g00001.1 [Raphanus sativus] (60)
| | | | \-100+ |
| | | | | \------------------------------- Tp4g17110 [Thellungiella parvula] (46)
| \-100+ | |
| | | \------------------------------------ Thhalv10016714m [Eutrema salsugineum] (39)
| | |
| | \---------------------------------------------- KFK36384.1 [Arabis alpina] (56)
| |
| \---------------------------------------------------- AA18G00140 [Aethionema arabicum] (64)
|
| /----- XP_010540640.1 [Tarenaya hassleriana] (13)
\---------------------------100--------------------------+
\----- XP_010519038.1 [Tarenaya hassleriana] (61)
Root part of tree:
/------------------------------------------------------------------- Gh_A10G0054 [Gossypium hirsutum] (1)
|
|------------------------------------------------------------------- Cotton_A_10225_BGI-A2_v1.0 [Gossypium arboreum] (8)
|
| /---------- (112)
| /--------100-------+
| | \---------- evm.model.supercontig_2011.1 [Carica papaya] (53)
| |
| /---74---+ /---------- orange1.1g012605m [Citrus sinensis] (5)
| | | /---100--+
| | | | \---------- Ciclev10014984m [Citrus clementina] (12)
| | \---100---+
| | | /---------- Neem_19571_f_1 [Azadirachta indica] (17)
| /---100---+ \---100--+
| | | \---------- Neem_4148_f_2 [Azadirachta indica] (21)
| | |
+ | | /---------- EcC051116.20 [Eucalyptus camaldulensis] (28)
| /---76---+ \------------100------------+
| | | \---------- Eucgr.K01971.1.p [Eucalyptus grandis] (51)
| | |
| | \------------------------------------------------ Thecc1EG026992t1 [Theobroma cacao] (35)
|---100---+
| | /---------- Cotton_A_15056_BGI-A2_v1.0 [Gossypium arboreum] (22)
| | /---100--+
| | | \---------- Gh_A05G3887 [Gossypium hirsutum] (59)
| \-----------------100-----------------+
| | /---------- Gh_D05G1063 [Gossypium hirsutum] (31)
| \---78---+
| \---------- Gorai.009G116800.1 [Gossypium raimondii] (57)
|
| /---------- Gh_D10G0061 [Gossypium hirsutum] (15)
\---------------------------100--------------------------+
\---------- Gorai.011G006600.1 [Gossypium raimondii] (42)
|




