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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3112
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/------------------------------------------------------------------- Bostr.17775s0009.1.p [Boechera stricta] (1)
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|------------------------------------------------------------------- Carubv10005907m [Capsella rubella] (63)
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| /------ Gorai.004G063800.1 [Gossypium raimondii] (2)
| /-100+
| | \------ Gh_D08G0559 [Gossypium hirsutum] (28)
| |
| /-100-+----------- Cotton_A_03292_BGI-A2_v1.0 [Gossypium arboreum] (7)
| | |
| | \----------- Gh_A08G0476 [Gossypium hirsutum] (30)
| |
| | /------ Gh_A07G1601 [Gossypium hirsutum] (18)
| | /-97-+
| /------100------+ | \------ Cotton_A_25817_BGI-A2_v1.0 [Gossypium arboreum] (31)
| | |-100-+
| | | | /------ Gh_D07G1800 [Gossypium hirsutum] (19)
| | | \-99-+
| | | \------ Gorai.001G205800.1 [Gossypium raimondii] (60)
| | |
| | \----------------- Thecc1EG019070t1 [Theobroma cacao] (42)
| |
| | /----------- Gorai.008G174500.1 [Gossypium raimondii] (6)
| | |
| | | /------ Gh_A12G2625 [Gossypium hirsutum] (13)
| | /-100-+-100+
| | | | \------ Cotton_A_06221_BGI-A2_v1.0 [Gossypium arboreum] (39)
| | | |
| | | \----------- Gh_D12G1579 [Gossypium hirsutum] (53)
| | |
| | /-100+ /------ Gorai.001G251000.1 [Gossypium raimondii] (9)
| | | | /-99-+
| | | | | \------ Gh_D13G1015 [Gossypium hirsutum] (22)
| | | | |
| | | | |----------- Gh_A13G2278 [Gossypium hirsutum] (21)
| /-100-+ /-100-+ \-100-+
| | | | | |----------- Cotton_A_37159_BGI-A2_v1.0 [Gossypium arboreum] (32)
| | | | | |
| | | | | \----------- Cotton_A_37158_BGI-A2_v1.0 [Gossypium arboreum] (47)
| | | | |
| | | | \---------------------- evm.model.supercontig_53.3 [Carica papaya] (62)
| | | |
| | |-89-+---------------------------- Eucgr.J01431.1.p [Eucalyptus grandis] (15)
| | | |
| | | |---------------------------- evm.model.supercontig_70.1 [Carica papaya] (20)
| | | |
| | | | /------ Ciclev10013334m [Citrus clementina] (27)
| | | | /-100+
| /--86-+ | | | \------ orange1.1g042014m [Citrus sinensis] (51)
| | | | \-------100------+
| | | | \----------- Neem_9758_f_1 [Azadirachta indica] (61)
| | | |
| | | | /------ XP_010525137.1 [Tarenaya hassleriana] (10)
| | | | |
| | | | /-100+------ XP_010558536.1 [Tarenaya hassleriana] (54)
| | | | | |
| | | \----------58---------+ \------ XP_010549959.1 [Tarenaya hassleriana] (64)
| | | |
| | | \----------- Eucgr.I02090.1.p [Eucalyptus grandis] (48)
| | |
| | | /------ XP_010528445.1 [Tarenaya hassleriana] (33)
| | \---------------100--------------+
| | \------ XP_010552351.1 [Tarenaya hassleriana] (46)
| |
| | /------ Araha.4302s0001.1.p [Arabidopsis halleri] (3)
+ | /-100+
| | | \------ 905328 [Arabidopsis lyrata] (14)
| | /-------54-------+
| | | \----------- AT3G30530.1 [Arabidopsis thaliana] (44)
| | |
| /-100+ | /------ Csa00478s020.1 [Camelina sativa] (12)
| | | | |
| | | | /-72-+------ Csa06g012990.1 [Camelina sativa] (24)
| | | | | |
| | | /-100+ /--50-+ \------ Csa04g020130.1 [Camelina sativa] (49)
| | | | | | |
| | | | | | \----------- Csa16998s010.1 [Camelina sativa] (35)
| | | | | /-78-+
| | | | | | | /------ Carubv10018121m [Capsella rubella] (36)
| | | | | | \----100---+
| | | | \--96-+ \------ Cagra.10423s0001.1.p [Capsella grandiflora] (38)
| | | | |
| | | | \---------------------- Bostr.0556s0629.1.p [Boechera stricta] (56)
| | | |
| | | | /----------- XP_009129683.1 [Brassica rapa] (5)
| | | | |
| | | | /-100-+ /------ GSBRNA2T00059232001 [Brassica napus] (41)
| | | | | \-100+
| | | | | \------ XP_013619546.1 [Brassica oleracea] (57)
| | | |------100------+
| | | | | /------ RrC6132_p1 [Raphanus raphanistrum] (55)
| /-100-+ | | \----100---+
| | | \----100----+ \------ Rsa1.0_05083.1_g00002.1 [Raphanus sativus] (67)
| | | |
| | | | /------ Thhalv10005423m [Eutrema salsugineum] (11)
| | | |------------88------------+
| | | | \------ Tp2g18200 [Thellungiella parvula] (40)
| | | |
| | | | /----------- GSBRNA2T00056834001 [Brassica napus] (16)
| | | | |
| | | | | /------ XP_013596330.1 [Brassica oleracea] (26)
| | | | /--88-+-100+
| | | | | | \------ GSBRNA2T00142959001 [Brassica napus] (34)
| | | | | |
| | | |------100------+ \----------- XP_009151747.1 [Brassica rapa] (37)
| /-100+ | | |
| | | | | | /------ RrC13178_p1 [Raphanus raphanistrum] (25)
| | | | | \----100---+
| | | | | \------ Rsa1.0_00408.1_g00016.1 [Raphanus sativus] (45)
| | | | |
| | | | \--------------------------------- 676782334 [Sisymbrium irio] (50)
| | | |
| | | \-------------------------------------------------- KFK36518.1 [Arabis alpina] (29)
| | |
| | | /------ 676709648 [Sisymbrium irio] (4)
|-100-+ | /-100+
| | | | \------ 676794296 [Sisymbrium irio] (17)
| | | /-100-+
| | | | \----------- Tp7g03140 [Thellungiella parvula] (43)
| | \------------------96------------------+
| | \----------------- Thhalv10028235m [Eutrema salsugineum] (52)
| |
| | /----------- AT5G38800.1 [Arabidopsis thaliana] (23)
| | |
| \-----------------------100-----------------------+ /------ Araha.1735s0007.1.p [Arabidopsis halleri] (59)
| \-100+
| \------ 916437 [Arabidopsis lyrata] (66)
|
| /----------- Csa00595s010.1 [Camelina sativa] (8)
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\--------------------------100--------------------------+ /------ Csa11g053830.1 [Camelina sativa] (58)
\-74-+
\------ Csa10g044960.1 [Camelina sativa] (65)
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