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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM313
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/------------------------------------------------------------------ Cotton_A_34432_BGI-A2_v1.0 [Gossypium arboreum] (1)
|
|------------------------------------------------------------------ Gorai.009G233500.1 [Gossypium raimondii] (67)
|
| /----------- XP_009123373.1 [Brassica rapa] (2)
| |
| /-100+ /----- GSBRNA2T00111212001 [Brassica napus] (81)
| | \-100-+
| | \----- XP_009139614.1 [Brassica rapa] (170)
| /-100-+
| | | /----- GSBRNA2T00069226001 [Brassica napus] (59)
| | \----100---+
| /-100+ \----- XP_013631638.1 [Brassica oleracea] (130)
| | |
| | | /----- RrC3277_p4 [Raphanus raphanistrum] (46)
| /--64-+ \-------100------+
| | | \----- Rsa1.0_00402.1_g00020.1 [Raphanus sativus] (168)
| | |
| /-61-+ \--------------------------- 676792224 [Sisymbrium irio] (140)
| | |
| | \--------------------------------- Tp7g11180 [Thellungiella parvula] (7)
| |
| | /----- 676706754 [Sisymbrium irio] (8)
| |---------------100--------------+
| | \----- 676706490 [Sisymbrium irio] (125)
| |
| /--64-+ /----- RrC22553_p1 [Raphanus raphanistrum] (18)
| | | /-100-+
| | | | \----- Rsa1.0_01420.1_g00004.1 [Raphanus sativus] (149)
| | |------------100-----------+
| | | \----------- GSBRNA2T00005865001 [Brassica napus] (137)
| | |
| | |-------------------------------------- Tp7g11190 [Thellungiella parvula] (139)
| | |
| | \-------------------------------------- Thhalv10026078m [Eutrema salsugineum] (143)
| |
| | /----------- Bostr.13671s0316.1.p [Boechera stricta] (4)
| | |
| | /----82----+ /----- Bostr.5022s0146.1.p [Boechera stricta] (26)
| | | \--88-+
| | | \----- Bostr.2651s0001.1.p [Boechera stricta] (30)
| | |
| | /-82-+ /----- Cagra.0568s0056.1.p [Capsella grandiflora] (73)
| | | | /----100---+
| | | | | \----- Carubv10011873m [Capsella rubella] (119)
| | | | |
| | | \-100-+ /----------- Csa14g014260.1 [Camelina sativa] (96)
| | | | |
| | | \-100+ /----- Csa03g015150.1 [Camelina sativa] (175)
| | | \-100-+
| | | \----- Csa17g015580.1 [Camelina sativa] (179)
| | /----82----+
| | | | /----- Carubv10015438m [Capsella rubella] (9)
| | | | /----100---+
| | | | | \----- Cagra.20132s0006.1.p [Capsella grandiflora] (29)
| | | | |
| | | | /--60-+ /----------- AT2G20613.1 [Arabidopsis thaliana] (72)
| | | | | | |
| | | | | \-88-+ /----- Araha.0091s0008.1.p [Arabidopsis halleri] (133)
| | | | | \--93-+
| | | \-59-+ \----- 900451 [Arabidopsis lyrata] (161)
| | | |
| | | | /----------- AT1G11510.1 [Arabidopsis thaliana] (17)
| |--59-+ | |
| | | \----90----+ /----- Araha.11900s0012.1.p [Arabidopsis halleri] (66)
| | | \--99-+
| | | \----- 888456 [Arabidopsis lyrata] (84)
| | |
| | | /--------------------------------- KFK43427.1 [Arabis alpina] (21)
| | | |
| | | | /----- XP_009148484.1 [Brassica rapa] (44)
| | | | /-100-+
| | | | | \----- GSBRNA2T00105319001 [Brassica napus] (123)
| | | | /-100+
| | | | | | /----- XP_013638352.1 [Brassica oleracea] (58)
| | \-72-+ | \-100-+
| | | /--99-+ \----- GSBRNA2T00093807001 [Brassica napus] (110)
| | | | |
| | | | | /----- RrC1484_p2 [Raphanus raphanistrum] (61)
| | | /-99-+ \----100---+
| | | | | \----- Rsa1.0_00740.1_g00005.1 [Raphanus sativus] (167)
| | | | |
| | \--99-+ \---------------------- 676723568 [Sisymbrium irio] (114)
| | |
| | \--------------------------- Tp1g10140 [Thellungiella parvula] (153)
| |
| |-------------------------------------------- Neem_2426_f_2 [Azadirachta indica] (5)
| |
| | /----------- Tp7g05050 [Thellungiella parvula] (6)
| | |
| | /-99-+ /----- Tp_un0005_014 [Thellungiella parvula] (35)
| | | \-100-+
| | | \----- Tp_un0006_014 [Thellungiella parvula] (141)
| | /-100-+
| | | | /----- Tp_un0006_003 [Thellungiella parvula] (63)
| | | | |
| | | \----100---+----- Tp_un0032_002 [Thellungiella parvula] (115)
| |----------82---------+ |
| | | \----- Tp_un0005_003 [Thellungiella parvula] (181)
| | |
| | | /----- 676711844 [Sisymbrium irio] (41)
| | \-------100------+
| | \----- 676729786 [Sisymbrium irio] (50)
| |
| | /----- Carubv10004944m [Capsella rubella] (10)
| | /-100-+
| | | \----- Cagra.8966s0005.1.p [Capsella grandiflora] (148)
| | /----93----+
| | | \----------- Bostr.5022s0106.1.p [Boechera stricta] (39)
| | |
| | | /----- 892497 [Arabidopsis lyrata] (25)
| | | /--90-+
| |----------92---------+ | \----- 865377 [Arabidopsis lyrata] (43)
| | | /-99-+
| | | | | /----- Araha.9974s0003.1.p [Arabidopsis halleri] (34)
| | | | \-100-+
| | \--99-+ \----- 916208 [Arabidopsis lyrata] (116)
| | |
| | \---------------- AT4G00610.1 [Arabidopsis thaliana] (150)
| |
| | /----- KFK24583.1 [Arabis alpina] (11)
| |------------------96------------------+
| | \----- KFK22018.1 [Arabis alpina] (77)
| |
| | /----- Tp3g27600 [Thellungiella parvula] (12)
| | /-100-+
| | | \----- Tp3g27630 [Thellungiella parvula] (64)
| |---------------95---------------+
| | \----------- Tp7g05550 [Thellungiella parvula] (45)
| |
| | /----- RrC14690_p1 [Raphanus raphanistrum] (13)
| | /----100---+
| | | \----- Rsa1.0_01881.1_g00002.1 [Raphanus sativus] (37)
| | |
| | /----100---+ /----------- XP_009113119.1 [Brassica rapa] (47)
| | | | |
| | | | | /----- XP_013613261.1 [Brassica oleracea] (83)
| | | \-98-+-100-+
| | | | \----- GSBRNA2T00034633001 [Brassica napus] (180)
| | | |
| | | \----------- GSBRNA2T00070582001 [Brassica napus] (94)
| | |
| | | /----- GSBRNA2T00051947001 [Brassica napus] (100)
| | /--66-+ /-100-+
| | | | | \----- XP_009113245.1 [Brassica rapa] (159)
| | | | /----100---+
| | | | | | /----- GSBRNA2T00124135001 [Brassica napus] (112)
| | | | | \-100-+
| | | | | \----- XP_013631626.1 [Brassica oleracea] (152)
| | | | |
| | | | | /----- Rsa1.0_00185.1_g00022.1 [Raphanus sativus] (124)
| | | \-86-+ /-100-+
| | | | | \----- RrC1307_p4 [Raphanus raphanistrum] (146)
| | /-64-+ | /-93-+
| | | | | | | /----- XP_009105150.1 [Brassica rapa] (151)
| | | | | | \--98-+
| | | | \--84-+ \----- GSBRNA2T00006750001 [Brassica napus] (154)
| | | | |
| | | | | /----- RrC26004_p1 [Raphanus raphanistrum] (128)
| |--66-+ | \----100---+
| | | | \----- Rsa1.0_04356.1_g00001.1 [Raphanus sativus] (142)
| | | |
| | | \--------------------------------- Tp2g02820 [Thellungiella parvula] (42)
+ | |
| | \-------------------------------------- Thhalv10023503m [Eutrema salsugineum] (74)
| |
| | /----- KFK23649.1 [Arabis alpina] (14)
| |------------------100-----------------+
| | \----- KFK40675.1 [Arabis alpina] (60)
| |
| | /----- Araha.11259s0001.1.p [Arabidopsis halleri] (16)
| | /--89-+
| | | \----- 475156 [Arabidopsis lyrata] (145)
| | /----74----+
| | | | /----- AT1G61730.1 [Arabidopsis thaliana] (75)
| | | \--66-+
| | | \----- AT4G00390.1 [Arabidopsis thaliana] (98)
| | |
| | /-53-+ /----- Carubv10020457m [Capsella rubella] (79)
| /-59-+ | | /----100---+
| | | | | | \----- Cagra.8164s0008.1.p [Capsella grandiflora] (166)
| | | | | |
| | | | \--82-+ /----- Csa09g096270.1 [Camelina sativa] (95)
| | |-------53-------+ | /-100-+
| | | | | | \----- Csa07g062970.1 [Camelina sativa] (164)
| | | | \-100+
| | | | \----------- Csa16g053490.1 [Camelina sativa] (127)
| | | |
| | | \--------------------------- Bostr.10040s0010.1.p [Boechera stricta] (40)
| | |
| | | /----- AT1G55950.1 [Arabidopsis thaliana] (19)
| | | /-------87-------+
| | | | \----- AT2G01370.1 [Arabidopsis thaliana] (20)
| | | |
| | |----------88---------+ /---------------- Bostr.28243s0041.1.p [Boechera stricta] (89)
| | | | |
| | | \-100-+ /----------- Araha.48421s0001.1.p [Arabidopsis halleri] (126)
| | | | |
| | | \-100+ /----- 892618 [Arabidopsis lyrata] (157)
| | | \--85-+
| | | \----- 892643 [Arabidopsis lyrata] (173)
| | |
| | | /----- Csa10g033280.1 [Camelina sativa] (22)
| | | /-100-+
| | | | \----- Csa11g041480.1 [Camelina sativa] (190)
| | | /-100+
| | | | \----------- Csa12g062990.1 [Camelina sativa] (147)
| | | |
| | | /--76-+ /----------- Csa01g044210.1 [Camelina sativa] (24)
| | | | | |
| | | | \-89-+ /----- Cagra.0338s0014.1.p [Capsella grandiflora] (80)
| | | | \-100-+
| | | | \----- Carubv10013903m [Capsella rubella] (163)
| | | |
| | | | /----- Araha.24841s0001.1.p [Arabidopsis halleri] (38)
| | |----------78---------+ /-100-+
| | | | | \----- 899900 [Arabidopsis lyrata] (174)
| | | | |
| | | | | /----- Araha.25074s0001.1.p [Arabidopsis halleri] (56)
| | | | /-94-+-100-+
| | | | | | \----- 859515 [Arabidopsis lyrata] (91)
| | | | | |
| | | \--80-+ \----------- AT1G44810.1 [Arabidopsis thaliana] (78)
| | | |
| | | | /----- AT4G00238.1 [Arabidopsis thaliana] (113)
| | | \----86----+
| | | \----- AT4G00250.1 [Arabidopsis thaliana] (156)
| | |
| | | /----- RrC10491_p3 [Raphanus raphanistrum] (27)
| | |------------------100-----------------+
| | | \----- Rsa1.0_13657.1_g00002.1 [Raphanus sativus] (171)
| | |
| | | /----- XP_010552533.1 [Tarenaya hassleriana] (28)
| | |------------------80------------------+
| | | \----- XP_010529017.1 [Tarenaya hassleriana] (176)
| | |
| | | /----- Thhalv10027791m [Eutrema salsugineum] (32)
| | |------------------66------------------+
| | | \----- Thhalv10023859m [Eutrema salsugineum] (122)
| | |
| | |-------------------------------------------- evm.model.supercontig_1622.1 [Carica papaya] (33)
| | |
| | | /----- GSBRNA2T00038423001 [Brassica napus] (48)
| | | /-100-+
| | | | \----- XP_009140153.1 [Brassica rapa] (162)
| | | /-100+
| | | | | /----- GSBRNA2T00108266001 [Brassica napus] (70)
| | | | \-100-+
| | |------------100------------+ \----- XP_013631648.1 [Brassica oleracea] (144)
| | | |
| | | | /----- Rsa1.0_00350.1_g00017.1 [Raphanus sativus] (110)
| | | \----100---+
| | | \----- RrC3287_p4 [Raphanus raphanistrum] (177)
| | |
| | | /----- Tp7g04750 [Thellungiella parvula] (49)
| | |------------------51------------------+
| | | \----- 676762152 [Sisymbrium irio] (118)
| /--97-+ |
| | | |-------------------------------------------- KFK36333.1 [Arabis alpina] (51)
| | | |
| | | |-------------------------------------------- Rsa1.0_00872.1_g00010.1 [Raphanus sativus] (52)
| | | |
| | | | /----- Cagra.0802s0009.1.p [Capsella grandiflora] (53)
| | | |------------------100-----------------+
| | | | \----- Carubv10016166m [Capsella rubella] (121)
| | | |
| | | |-------------------------------------------- Rsa1.0_06364.1_g00002.1 [Raphanus sativus] (55)
| | | |
| | | |-------------------------------------------- evm.model.supercontig_8.251 [Carica papaya] (57)
| | | |
| | | |-------------------------------------------- Eucgr.E03593.1.p [Eucalyptus grandis] (62)
| | | |
| | | | /----- Neem_31505_f_3 [Azadirachta indica] (65)
| | | | /-100-+
| | | | | \----- Neem_15749_f_1 [Azadirachta indica] (180)
| | | | /-100+
| | | | | | /----- Neem_11166_f_1 [Azadirachta indica] (68)
| | | | | \-100-+
| | | | | \----- Neem_28209_f_1 [Azadirachta indica] (120)
| | | |-------------78------------+
| | | | | /----- Ciclev10015528m [Citrus clementina] (131)
| | | | | /-100-+
| | | | | | \----- orange1.1g036050m [Citrus sinensis] (135)
| | | | \-62-+
| | | | | /----- Ciclev10011975m [Citrus clementina] (165)
| | | | \-100-+
| | | | \----- orange1.1g017042m [Citrus sinensis] (178)
| | | |
| | | |-------------------------------------------- KFK24186.1 [Arabis alpina] (69)
| | | |
| | | | /----- EcS515031.10 [Eucalyptus camaldulensis] (71)
| | | | /--93-+
| | | | | \----- EcC050635.10 [Eucalyptus camaldulensis] (87)
| | | |---------------100--------------+
| | | | \----------- EcC046149.20 [Eucalyptus camaldulensis] (140)
| | | |
| | | | /----- AT1G66420.1 [Arabidopsis thaliana] (76)
| | | |------------------100-----------------+
| | | | \----- 475744 [Arabidopsis lyrata] (92)
| /-97-+ | |
| | | | | /----- KFK30638.1 [Arabis alpina] (82)
| | | | |------------------100-----------------+
| | | | | \----- KFK30641.1 [Arabis alpina] (138)
| | | | |
| | | | |-------------------------------------------- KFK43271.1 [Arabis alpina] (85)
| | | | |
| | | | |-------------------------------------------- XP_009140722.1 [Brassica rapa] (86)
| | | | |
| | | | |-------------------------------------------- Thhalv10028218m [Eutrema salsugineum] (88)
| | | | |
| | | | |-------------------------------------------- EcS719901.10 [Eucalyptus camaldulensis] (90)
| | | | |
| | | | |-------------------------------------------- KFK33322.1 [Arabis alpina] (93)
| | | | |
| | | | |-------------------------------------------- Thecc1EG033457t1 [Theobroma cacao] (99)
| | | | |
| | | | |-------------------------------------------- Carubv10015397m [Capsella rubella] (120)
| | | | |
| | | | |-------------------------------------------- Tp7g05700 [Thellungiella parvula] (130)
| | | | |
| | | | |-------------------------------------------- Thhalv10003395m [Eutrema salsugineum] (160)
| | | | |
| | | | |-------------------------------------------- AA53G00569 [Aethionema arabicum] (111)
| | | | |
| | | | |-------------------------------------------- KFK40965.1 [Arabis alpina] (132)
| | | | |
\-100-+ | | |-------------------------------------------- 676788056 [Sisymbrium irio] (134)
| | | |
| | | |-------------------------------------------- KFK32172.1 [Arabis alpina] (136)
| | | |
| | | |-------------------------------------------- XP_010528789.1 [Tarenaya hassleriana] (158)
| | | |
| | | \-------------------------------------------- XP_010533837.1 [Tarenaya hassleriana] (172)
| | |
| | \------------------------------------------------- Thecc1EG032355t1 [Theobroma cacao] (97)
| |
| | /----- Cotton_A_27978_BGI-A2_v1.0 [Gossypium arboreum] (3)
| | |
| | /--99-+----- Gh_A01G0277 [Gossypium hirsutum] (15)
| | | |
| | | \----- Cotton_A_27974_BGI-A2_v1.0 [Gossypium arboreum] (23)
| \--------------------100--------------------+
| | /----- Gh_D01G0288 [Gossypium hirsutum] (129)
| \--99-+
| \----- Gorai.002G037800.1 [Gossypium raimondii] (169)
|
| /----- Cotton_A_10427_BGI-A2_v1.0 [Gossypium arboreum] (31)
| /--97-+
| | \----- Gh_A10G1752 [Gossypium hirsutum] (54)
| /-100+
| | | /----- Gorai.011G228000.1 [Gossypium raimondii] (117)
| | \-100-+
| | \----- Gh_D10G2023 [Gossypium hirsutum] (170)
\---------------------99--------------------+
| /----- Gorai.013G021200.1 [Gossypium raimondii] (36)
| /-100-+
| | \----- Gh_D13G0192 [Gossypium hirsutum] (155)
\-100+
| /----- Cotton_A_00950_BGI-A2_v1.0 [Gossypium arboreum] (150)
\-100-+
\----- Gh_A13G0177 [Gossypium hirsutum] (160)
|
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