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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3203
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 108:
/----- XP_009142314.1 [Brassica rapa] (2)
/-100+
| \----- GSBRNA2T00063226001 [Brassica napus] (59)
/-100+
| | /----- XP_013635109.1 [Brassica oleracea] (38)
| \-100+
/--64-+ \----- GSBRNA2T00037347001 [Brassica napus] (54)
| |
| | /----- Rsa1.0_17254.1_g00001.1 [Raphanus sativus] (3)
/-100+ \---100---+
| | \----- RrC12158_p1 [Raphanus raphanistrum] (65)
| |
/-92-+ \--------------------- Rsa1.0_45292.1_g00001.1 [Raphanus sativus] (15)
| |
| \-------------------------- Tp4g27110 [Thellungiella parvula] (8)
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| /----- Rsa1.0_00675.1_g00007.1 [Raphanus sativus] (4)
| /---100---+
| | \----- RrC7_p6 [Raphanus raphanistrum] (27)
| |
| | /----- XP_009143097.1 [Brassica rapa] (6)
| /--98-+ /-99-+
/-88-+ | | | \----- GSBRNA2T00116667001 [Brassica napus] (48)
| | | | |
| | | \-100+---------- XP_013634221.1 [Brassica oleracea] (18)
| | /-95-+ |
| | | | \---------- GSBRNA2T00006174001 [Brassica napus] (49)
| | | |
| |-66-+ \--------------------- KFK37299.1 [Arabis alpina] (7)
| | |
| | \-------------------------- 676735094 [Sisymbrium irio] (30)
| |
| \------------------------------- Thhalv10001591m [Eutrema salsugineum] (66)
/-83-+
| | /----- Csa05g004220.1 [Camelina sativa] (5)
| | |
| | /---100---+----- Csa06g051440.1 [Camelina sativa] (16)
| | | |
| | | \----- Csa04g062950.1 [Camelina sativa] (37)
| | |
| | /--96-+ /----- Cagra.0239s0057.1.p [Capsella grandiflora] (25)
| | | | /-100+
/-100+ | | | | \----- Carubv10023643m [Capsella rubella] (52)
| | | | \-66-+
| | \------96------+ \---------- Bostr.25993s0268.1.p [Boechera stricta] (39)
| | |
| | | /----- 903940 [Arabidopsis lyrata] (31)
| | \-------70------+
| | \----- AT2G45050.1 [Arabidopsis thaliana] (40)
| |
| \----------------------------------------- AA21G00251 [Aethionema arabicum] (45)
|
| /----- Gorai.004G164700.1 [Gossypium raimondii] (11)
| /-97-+
| | \----- Gh_D08G1521 [Gossypium hirsutum] (24)
| |
| /-100+ /----- Cotton_A_31809_BGI-A2_v1.0 [Gossypium arboreum] (28)
| | | |
/--74-+ | \-74-+----- Cotton_A_31808_BGI-A2_v1.0 [Gossypium arboreum] (53)
| | /--94-+ |
| | | | \----- Gh_A08G1235 [Gossypium hirsutum] (60)
| | | |
| | | \--------------- Thecc1EG005613t1 [Theobroma cacao] (33)
| | /-76-+
| | | | /---------- Neem_7148_f_1 [Azadirachta indica] (21)
| | | | |
| | | \----99----+ /----- Ciclev10021733m [Citrus clementina] (29)
| | /-61-+ \-100+
/-66-+ | | | \----- orange1.1g024757m [Citrus sinensis] (35)
| | | | |
| | | /-74-+ \-------------------------- evm.model.supercontig_941.1 [Carica papaya] (64)
| | | | |
| | | | \------------------------------- Ciclev10003771m [Citrus clementina] (19)
| | \----72---+
| | | /----- XP_010544607.1 [Tarenaya hassleriana] (57)
| | \--------------81--------------+
| | \----- XP_010524408.1 [Tarenaya hassleriana] (61)
| |
| \---------------------------------------------------- AA61G00432 [Aethionema arabicum] (62)
|
|--------------------------------------------------------- Bostr.13158s0054.1.p [Boechera stricta] (13)
|
| /----- Cagra.6011s0001.1.p [Capsella grandiflora] (26)
/-82-+ /---100---+
| | | \----- Carubv10017916m [Capsella rubella] (43)
| | |
| |--------------------51-------------------+ /----- Csa16g004350.1 [Camelina sativa] (32)
| | | /-92-+
| | | | \----- Csa07g004390.1 [Camelina sativa] (50)
| | \-55-+
| | \---------- Csa05g092350.1 [Camelina sativa] (63)
| |
--54-+ |--------------------------------------------------------- KFK35258.1 [Arabis alpina] (41)
| |
| |--------------------------------------------------------- EcC012760.10 [Eucalyptus camaldulensis] (44)
| |
| | /----- 486528 [Arabidopsis lyrata] (51)
| \-------------------------99------------------------+
| \----- AT3G60530.1 [Arabidopsis thaliana] (55)
|
\-------------------------------------------------------------- Thhalv10006202m [Eutrema salsugineum] (12)
Root part of tree:
/------------------------------------------------------------------- 676749390 [Sisymbrium irio] (1)
|
| /----------- RrC14297_p1 [Raphanus raphanistrum] (17)
|---------------------------95--------------------------+
| \----------- Rsa1.0_07830.1_g00003.1 [Raphanus sativus] (58)
|
| /----------- (108)
| /----------------73---------------+
| | \----------- Tp5g02690 [Thellungiella parvula] (10)
| |
+ | /----------- GSBRNA2T00099030001 [Brassica napus] (9)
| | /----100---+
| /----79----+ | \----------- XP_009104270.1 [Brassica rapa] (34)
| | | /----96----+
| | | | | /----------- GSBRNA2T00106016001 [Brassica napus] (20)
| | | | \----100---+
| | | | \----------- XP_013588581.1 [Brassica oleracea] (47)
| | \----100----+
| | | /---------------------- Rsa1.0_26460.1_g00001.1 [Raphanus sativus] (14)
| | | |
\----51----+ \----100---+ /----------- RrC28482_p1 [Raphanus raphanistrum] (23)
| \----100---+
| \----------- Rsa1.0_01432.1_g00004.1 [Raphanus sativus] (42)
|
| /----------- XP_013602065.1 [Brassica oleracea] (22)
| /----99----+
| | \----------- GSBRNA2T00155519001 [Brassica napus] (46)
\----------------99---------------+
| /----------- GSBRNA2T00072558001 [Brassica napus] (36)
\----97----+
\----------- XP_009116733.1 [Brassica rapa] (56)
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