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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM323
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 216:
/---------- XP_013635013.1 [Brassica oleracea] (3)
|
| /----- XP_009142416.1 [Brassica rapa] (32)
/-100+-100+
| | \----- GSBRNA2T00053358001 [Brassica napus] (98)
| |
| \---------- GSBRNA2T00037260001 [Brassica napus] (84)
/-77-+
| | /----- XP_013635105.1 [Brassica oleracea] (31)
| | |
| | |----- GSBRNA2T00074062001 [Brassica napus] (57)
| \---100---+
/-64-+ |----- GSBRNA2T00132894001 [Brassica napus] (69)
| | |
| | \----- XP_009142648.1 [Brassica rapa] (119)
| |
/-100+ \-------------------- KFK37407.1 [Arabis alpina] (34)
| |
| | /----- GSBRNA2T00138929001 [Brassica napus] (56)
| \---------68--------+
/--53-+ \----- GSBRNA2T00101593001 [Brassica napus] (115)
| |
| | /----- XP_009133779.1 [Brassica rapa] (93)
/-58-+ \-----------69-----------+
| | \----- XP_013627412.1 [Brassica oleracea] (131)
| |
| \------------------------------------ Rsa1.0_02653.1_g00003.1 [Raphanus sativus] (171)
/-78-+
| |----------------------------------------- 676734698 [Sisymbrium irio] (8)
| |
/-54-+ \----------------------------------------- Rsa1.0_00201.1_g00031.1 [Raphanus sativus] (38)
| |
/-53-+ \---------------------------------------------- RrC1008_p3 [Raphanus raphanistrum] (52)
| |
| \--------------------------------------------------- Tp4g28430 [Thellungiella parvula] (77)
|
| /---------- Bostr.25993s0128.1.p [Boechera stricta] (6)
| |
/-89-+ |---------- Cagra.0050s0058.1.p [Capsella grandiflora] (14)
| | |
| | | /----- Csa06g052900.1 [Camelina sativa] (41)
| | | |
| | |-81-+----- Csa05g002790.1 [Camelina sativa] (78)
| | | |
| \----------------------57---------------------+ \----- Csa04g065460.1 [Camelina sativa] (165)
| |
--58-+ |---------- AT2G46410.1 [Arabidopsis thaliana] (66)
| |
| |---------- Thhalv10001695m [Eutrema salsugineum] (121)
| |
| |---------- Araha.40568s0001.1.p [Arabidopsis halleri] (126)
| |
| \---------- Carubv10024406m [Capsella rubella] (177)
|
\------------------------------------------------------------- XP_010559129.1 [Tarenaya hassleriana] (147)
Subtree rooted at node 283:
/-------------------------------------------------------- Thecc1EG015351t1 [Theobroma cacao] (4)
|
| /---------------------------------------------- XP_009119863.1 [Brassica rapa] (9)
| |
| | /----- XP_013609347.1 [Brassica oleracea] (11)
| | |
| |-------------------95-------------------+----- GSBRNA2T00009407001 [Brassica napus] (42)
| | |
| | \----- GSBRNA2T00009408001 [Brassica napus] (133)
| |
| | /--------------- AT5G53200.1 [Arabidopsis thaliana] (17)
| | |
| | | /----- Csa11g085060.1 [Camelina sativa] (25)
| | | /-99-+
| | | | \----- Csa18g024230.1 [Camelina sativa] (29)
| | |-99-+
| |--------------85--------------+ \---------- Csa02g049550.1 [Camelina sativa] (163)
| | |
| | |--------------- 357563 [Arabidopsis lyrata] (50)
| | |
| | |--------------- Bostr.26833s0960.1.p [Boechera stricta] (117)
| | |
| | \--------------- Araha.24710s0001.1.p [Arabidopsis halleri] (180)
| |
| | /--------------- Carubv10024964m [Capsella rubella] (27)
| | |
| | | /----- 481955 [Arabidopsis lyrata] (65)
| | /------87------+ /-99-+
| | | | | \----- Araha.4880s0001.1.p [Arabidopsis halleri] (145)
| | | \-51-+
| | | \---------- AT2G30432.1 [Arabidopsis thaliana] (76)
| | |
| | | /-------------------- Csa16g014450.1 [Camelina sativa] (79)
| | | |
| | | | /----- Cagra.0567s0009.1.p [Capsella grandiflora] (80)
| | | |------100-----+
| | | | \----- Carubv10025583m [Capsella rubella] (88)
| | | |
| | /--64-+ | /---------- AT2G30420.1 [Arabidopsis thaliana] (82)
| | | | /-93-+ |
| | | | | | /-93-+ /----- 902029 [Arabidopsis lyrata] (113)
| | | | | | | \-100+
| | | | | |-76-+ \----- 856498 [Arabidopsis lyrata] (181)
| | | | | | |
| | | | | | \--------------- Bostr.24513s0196.1.p [Boechera stricta] (190)
| | | | | |
| | | | | \-------------------- Csa05g033290.1 [Camelina sativa] (127)
| | | | |
| | | \-70-+ /----- GSBRNA2T00024517001 [Brassica napus] (83)
| | | | /-100+
| | | | | \----- XP_013626295.1 [Brassica oleracea] (148)
| | /-91-+ | /-78-+
| | | | | | | /----- GSBRNA2T00142148001 [Brassica napus] (86)
| | | | | | \-100+
| | | | | /-100+ \----- XP_009132732.1 [Brassica rapa] (120)
| | | | | | |
| | | | \-89-+ \--------------- RrC3941_p2 [Raphanus raphanistrum] (184)
| | | | |
| /-57-+ | | \-------------------- Thhalv10017480m [Eutrema salsugineum] (190)
| | | | |
| | | | | /---------- KFK22006.1 [Arabis alpina] (60)
| | | | | |
| | | | | | /----- Carubv10024393m [Capsella rubella] (125)
| | | | | |-66-+
| | | | \------------57-----------+ \----- Bostr.24513s0195.1.p [Boechera stricta] (183)
| | | | |
| | |-78-+ | /----- 902030 [Arabidopsis lyrata] (156)
| | | | \-100+
| | | | \----- AT2G30424.1 [Arabidopsis thaliana] (167)
| | | |
| | | | /----- GSBRNA2T00028222001 [Brassica napus] (48)
| | | | |
| | | | /-87-+----- XP_013587526.1 [Brassica oleracea] (68)
| | | | | |
| | | | | \----- GSBRNA2T00028218001 [Brassica napus] (110)
| | | | /-95-+
| | | | | |---------- XP_009144060.1 [Brassica rapa] (170)
| | | | | |
| | | | /-86-+ \---------- GSBRNA2T00149404001 [Brassica napus] (168)
| | | | | |
| | | | | \--------------- Rsa1.0_01460.1_g00004.1 [Raphanus sativus] (71)
| | | \---------100--------+
| | | | /----- GSBRNA2T00078846001 [Brassica napus] (92)
| | | \------100-----+
| | | \----- XP_009109119.1 [Brassica rapa] (95)
| | |
| | | /----- XP_009127186.1 [Brassica rapa] (33)
|-75-+ | |
| | |-------------------100------------------+----- RrC7880_p1 [Raphanus raphanistrum] (134)
| | | |
| | | \----- XP_013619584.1 [Brassica oleracea] (170)
| | |
| | | /--------------- Tp6g15380 [Thellungiella parvula] (35)
| | | |
/-70-+ | | | /---------- GSBRNA2T00024989001 [Brassica napus] (40)
| | | | | |
| | | | | | /----- GSBRNA2T00086671001 [Brassica napus] (137)
| | | | | |-99-+
| | | | /-64-+-97-+ \----- XP_009132494.1 [Brassica rapa] (172)
| | | | | | |
| | | | | | | /----- XP_013626756.1 [Brassica oleracea] (142)
| | | | | | \-69-+
| | | |------------54-----------+ | \----- GSBRNA2T00066516001 [Brassica napus] (162)
| | | | | |
| | | | | \--------------- RrC23313_p1 [Raphanus raphanistrum] (149)
| | | | |
| | | | \-------------------- Thhalv10015741m [Eutrema salsugineum] (175)
| | | |
| | | | /----- Cagra.0084s0067.1.p [Capsella grandiflora] (70)
| | | |-------------------100------------------+
| | | | \----- Carubv10027412m [Capsella rubella] (189)
| | | |
| | | |---------------------------------------------- 676757634 [Sisymbrium irio] (91)
| | | |
| | | \---------------------------------------------- KFK26937.1 [Arabis alpina] (122)
| | |
| | \--------------------------------------------------- AA77G00034 [Aethionema arabicum] (161)
| |
| | /----- XP_010537120.1 [Tarenaya hassleriana] (13)
| | |
| |------------------------59------------------------+----- XP_010555717.1 [Tarenaya hassleriana] (36)
| | |
| | \----- XP_010521380.1 [Tarenaya hassleriana] (64)
| |
| | /----- Gh_A06G1771 [Gossypium hirsutum] (24)
| | /-99-+
| | | \----- Cotton_A_04954_BGI-A2_v1.0 [Gossypium arboreum] (188)
| | /-100+
| | | | /----- Gh_D06G2207 [Gossypium hirsutum] (43)
| | | \-100+
| | /-74-+ \----- Gorai.010G252300.1 [Gossypium raimondii] (130)
| | | |
| | | \--------------- Thecc1EG030224t1 [Theobroma cacao] (141)
| | /-70-+
| | | | /----- Eucgr.D01323.1.p [Eucalyptus grandis] (144)
| | | \------100-----+
| | | \----- EcC016308.10 [Eucalyptus camaldulensis] (173)
| | |
| | |------------------------- Neem_38154_f_1 [Azadirachta indica] (90)
| | |
| | | /----- Gh_D12G1561 [Gossypium hirsutum] (99)
| | | /-100+
| | | | \----- Gorai.008G172400.1 [Gossypium raimondii] (166)
--51-+ | /-63-+------100-----+
| | | | | /----- Gh_A12G1443 [Gossypium hirsutum] (180)
| | | | \-53-+
| | | | \----- Cotton_A_31060_BGI-A2_v1.0 [Gossypium arboreum] (155)
| | | |
| | | | /----- Ciclev10017220m [Citrus clementina] (135)
| | | |---------57--------+
| | | | \----- Eucgr.A01720.1.p [Eucalyptus grandis] (140)
| | | |
| | | \------------------------- Thecc1EG011327t1 [Theobroma cacao] (157)
| | |
| | | /----- Cotton_A_04739_BGI-A2_v1.0 [Gossypium arboreum] (55)
| | /--58-+ /-91-+
| | | | | \----- Gh_A01G0578 [Gossypium hirsutum] (81)
| | | | /-100+
| | | | | | /----- Gorai.002G083400.1 [Gossypium raimondii] (158)
| | | | | \-93-+
| | | |------100-----+ \----- Gh_D01G0589 [Gossypium hirsutum] (174)
| | | | |
| | | | \--------------- Thecc1EG046858t1 [Theobroma cacao] (185)
| | | |
| | | | /----- EcC040891.10 [Eucalyptus camaldulensis] (132)
| | | | /-63-+
| | | | | \----- EcS615500.10 [Eucalyptus camaldulensis] (153)
| | | \--------100--------+
| | | \---------- Eucgr.K00803.1.p [Eucalyptus grandis] (159)
| |--------100--------+
| | | /----- Neem_22985_f_3 [Azadirachta indica] (28)
| | |--------------94--------------+
| | | \----- Neem_11123_f_6 [Azadirachta indica] (152)
| | |
| | | /----- Gorai.010G253000.1 [Gossypium raimondii] (46)
| | | /-97-+
| | | | \----- Gh_D06G2201 [Gossypium hirsutum] (123)
| | | /-100+
| | | | \---------- Gh_A06G1779 [Gossypium hirsutum] (140)
| | |---------100--------+
| | | \--------------- Cotton_A_04961_BGI-A2_v1.0 [Gossypium arboreum] (187)
| | |
| | \------------------------------------ Thecc1EG030163t1 [Theobroma cacao] (110)
| |
| | /----- Ciclev10006315m [Citrus clementina] (74)
| |------------------------56------------------------+
| | \----- Eucgr.K00332.1.p [Eucalyptus grandis] (160)
| |
| \-------------------------------------------------------- evm.model.supercontig_3.55 [Carica papaya] (136)
|
| /----- Thecc1EG016428t1 [Theobroma cacao] (16)
\---------------------------91--------------------------+
\----- Eucgr.E00851.1.p [Eucalyptus grandis] (73)
Root part of tree:
/------------------------------------------------------------------ XP_013628635.1 [Brassica oleracea] (1)
|
|------------------------------------------------------------------ GSBRNA2T00112174001 [Brassica napus] (53)
|
|------------------------------------------------------------------ XP_009134506.1 [Brassica rapa] (150)
|
|------------------------------------------------------------------ GSBRNA2T00153494001 [Brassica napus] (186)
|
| /----- Csa07g002980.1 [Camelina sativa] (2)
| /-100-+
| | \----- Csa05g093780.1 [Camelina sativa] (97)
| /-58-+
| | | /----- Carubv10018233m [Capsella rubella] (58)
| | \-100-+
| /--51-+ \----- Cagra.0483s0079.1.p [Capsella grandiflora] (94)
| | |
| | \---------------- Bostr.13158s0169.1.p [Boechera stricta] (59)
| /-60-+
| | |---------------------- Csa16g003790.1 [Camelina sativa] (49)
| | |
| /-100-+ \---------------------- 867626 [Arabidopsis lyrata] (51)
| | |
| /-98-+ \--------------------------- KFK35358.1 [Arabis alpina] (176)
| | |
| | \--------------------------------- (216)
| |
| | /----- (283)
| | |
| | /--51-+----- evm.TU.contig_29502.1 [Carica papaya] (179)
| | | |
| /--68-+ | \----- Eucgr.D02360.1.p [Eucalyptus grandis] (191)
| | | |
| | | | /----- Gh_A07G1272 [Gossypium hirsutum] (5)
| | | | |
| | | | |----- Gorai.001G155700.1 [Gossypium raimondii] (89)
| | | |-100-+
| | | | |----- Cotton_A_34309_BGI-A2_v1.0 [Gossypium arboreum] (114)
| | | | |
| | \------------67------------+ \----- Gh_D07G1383 [Gossypium hirsutum] (193)
| | |
| /-70-+ |----------- Thecc1EG005177t1 [Theobroma cacao] (19)
| | | |
| | | | /----- orange1.1g034546m [Citrus sinensis] (21)
| | | |-100-+
| | | | \----- Ciclev10024111m [Citrus clementina] (143)
| | | |
| | | |----------- Neem_11104_f_1 [Azadirachta indica] (62)
| | | |
| /--55-+ | \----------- Eucgr.E00069.1.p [Eucalyptus grandis] (169)
| | | |
| | | \-------------------------------------------- AA32G00127 [Aethionema arabicum] (100)
| | |
| | | /----------- XP_013619456.1 [Brassica oleracea] (63)
| | | |
| | | | /----- GSBRNA2T00104241001 [Brassica napus] (96)
| | \------------------91-----------------+-100-+
| | | \----- XP_009128504.1 [Brassica rapa] (192)
| | |
+ | \----------- GSBRNA2T00113232001 [Brassica napus] (154)
| |
| | /---------------- AT1G01380.1 [Arabidopsis thaliana] (7)
| | |
| | | /----- Araha.11664s0005.1.p [Arabidopsis halleri] (18)
| | |----93----+
| | | \----- 878325 [Arabidopsis lyrata] (120)
| | |
| | | /----- Cagra.1968s0081.1.p [Capsella grandiflora] (22)
| | | /-100-+
| | /--70-+ | \----- Carubv10011382m [Capsella rubella] (39)
| | | | |
| | | |-100+ /----- Csa17g001840.1 [Camelina sativa] (54)
| | | | | |
| | | | \-100-+----- Csa14g001750.1 [Camelina sativa] (129)
| | | | |
| | | | \----- Csa03g001830.1 [Camelina sativa] (138)
| | | |
| | | \---------------- Bostr.5325s0057.1.p [Boechera stricta] (128)
| | |
| | | /----------- 676747518 [Sisymbrium irio] (20)
| | | |
| | | /-99-+ /----- GSBRNA2T00007881001 [Brassica napus] (23)
| | | | \-100-+
| | /-70-+ | \----- XP_013627900.1 [Brassica oleracea] (118)
| | | | |
| | | |--98-+ /----- Rsa1.0_00069.1_g00011.1 [Raphanus sativus] (61)
| | | | | |
| | | | | |----- XP_013603708.1 [Brassica oleracea] (75)
| | | | \----100---+
| | | | |----- XP_009118810.1 [Brassica rapa] (112)
| | | | |
| | /--70-+ | \----- GSBRNA2T00065061001 [Brassica napus] (146)
| | | | |
| /-100+ | | |---------------------- Tp1g00910 [Thellungiella parvula] (44)
| | | | | |
| | | | | |---------------------- KFK42528.1 [Arabis alpina] (87)
| | | | | |
| | | /-70-+ | \---------------------- Thhalv10009233m [Eutrema salsugineum] (150)
| | | | | |
| | | | | \--------------------------- AA1G00082 [Aethionema arabicum] (139)
| | | | |
| | | | |--------------------------------- XP_010556590.1 [Tarenaya hassleriana] (45)
| | | | |
| | | | \--------------------------------- XP_010544429.1 [Tarenaya hassleriana] (178)
| | | |
| | | | /----- Csa13g056270.1 [Camelina sativa] (10)
| | | | |
| | |-------67-------+ /--70-+----- Csa08g053430.1 [Camelina sativa] (47)
| | | | | |
| | | | | \----- Csa02g002230.1 [Camelina sativa] (194)
| | | | /-89-+
| | | | | | /----- Carubv10003403m [Capsella rubella] (85)
| | | | | \-100-+
| | | | /--88-+ \----- Cagra.1372s0017.1.p [Capsella grandiflora] (124)
| | | | | |
| | | | | \---------------- Bostr.7365s0058.1.p [Boechera stricta] (30)
| | | | |
\--97-+ | \-------89------+ /----- 327672 [Arabidopsis lyrata] (37)
| | | /-100-+
| | | | \----- AT4G01060.1 [Arabidopsis thaliana] (164)
| | \----94----+
| | \----------- Araha.21051s0001.1.p [Arabidopsis halleri] (160)
| |
| |------------------------------------------------------- Tp6g01080 [Thellungiella parvula] (12)
| |
| |------------------------------------------------------- Thhalv10029104m [Eutrema salsugineum] (15)
| |
| | /----- XP_013610245.1 [Brassica oleracea] (26)
| | /-100-+
| | | \----- GSBRNA2T00123528001 [Brassica napus] (130)
| | /-84-+
| | | | /----- GSBRNA2T00091199001 [Brassica napus] (116)
| | | \--95-+
| |------------------100-----------------+ \----- XP_009111414.1 [Brassica rapa] (182)
| | |
| | \---------------- Rsa1.0_15346.1_g00001.1 [Raphanus sativus] (67)
| |
| \------------------------------------------------------- KFK30682.1 [Arabis alpina] (151)
|
| /----- RrC26450_p1 [Raphanus raphanistrum] (72)
\--------------------------100-------------------------+
\----- Rsa1.0_00187.1_g00016.1 [Raphanus sativus] (111)
|
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