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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3339
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 115:
/--------------- Thecc1EG027142t1 [Theobroma cacao] (2)
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| /---------- Gh_Sca069306G01 [Gossypium hirsutum] (22)
/-100-+ |
| | | /----- Cotton_A_31397_BGI-A2_v1.0 [Gossypium arboreum] (23)
| | |-62-+
| \-100+ \----- Gh_A10G1400 [Gossypium hirsutum] (46)
| |
| | /----- Gh_D10G0799 [Gossypium hirsutum] (38)
/----98---+ \-57-+
| | \----- Gorai.011G090900.1 [Gossypium raimondii] (49)
| |
| | /----- orange1.1g048741m [Citrus sinensis] (28)
| | /-100+
| | | \----- Ciclev10003702m [Citrus clementina] (29)
| \----100---+
| \---------- Neem_5846_f_1 [Azadirachta indica] (30)
|
/-94-+ /----- Ciclev10027184m [Citrus clementina] (6)
| | /-------76------+
| | | \----- Neem_9504_f_1 [Azadirachta indica] (56)
| | |
| | | /---------- Gorai.012G046200.1 [Gossypium raimondii] (17)
| | /-100+ |
| | | | /-100+ /----- Cotton_A_17599_BGI-A2_v1.0 [Gossypium arboreum] (26)
/-100+ | | | | \-100+
| | | | \--61-+ \----- Gh_A05G3240 [Gossypium hirsutum] (57)
| | \-88-+ |
| | | \--------------- Thecc1EG001660t1 [Theobroma cacao] (20)
| | |
/----100---+ | \-------------------------- evm.model.supercontig_173.5 [Carica papaya] (50)
| | |
| | \------------------------------------ Eucgr.G00066.1.p [Eucalyptus grandis] (27)
| |
| | /----- XP_010527865.1 [Tarenaya hassleriana] (41)
| \----------------100----------------+
| \----- XP_010554331.1 [Tarenaya hassleriana] (43)
|
| /---------- 676754416 [Sisymbrium irio] (3)
| |
| /---------100--------+ /----- Rsa1.0_00737.1_g00013.1 [Raphanus sativus] (5)
| | \-100+
| | \----- RrC27453_p1 [Raphanus raphanistrum] (19)
| |
| | /----- RrC7442_p1 [Raphanus raphanistrum] (8)
| | /------100------+
| /-100+ | \----- Rsa1.0_00162.1_g00025.1 [Raphanus sativus] (36)
| | | |
| | | /-100+ /--------------- XP_009129138.1 [Brassica rapa] (18)
| | | | | |
/-100+ | | | \-100-+ /---------- GSBRNA2T00030829001 [Brassica napus] (21)
| | | | | | |
| | /-100+ \-99-+ \-100+ /----- GSBRNA2T00073390001 [Brassica napus] (52)
| | | | | \-94-+
| | | | | \----- XP_013618278.1 [Brassica oleracea] (63)
| | | | |
| | | | \-------------------------- Tp2g13770 [Thellungiella parvula] (54)
| | | |
| | | \------------------------------------ Thhalv10004643m [Eutrema salsugineum] (44)
| | |
| | | /----- Carubv10017657m [Capsella rubella] (4)
| | | /-100+
| | /-100+ | \----- Cagra.0534s0039.1.p [Capsella grandiflora] (65)
| | | | /-52-+
| | | | | \---------- Bostr.0556s0077.1.p [Boechera stricta] (34)
/-82-+ | | | |
| | | | | /--64-+ /---------- Csa06g002650.1 [Camelina sativa] (9)
| | | | | | | |
| | | | | | \-100+ /----- Csa04g008070.1 [Camelina sativa] (11)
| | | | | | \-73-+
| | \-100-+ | | \----- Csa09g004840.1 [Camelina sativa] (25)
| | | \--------100--------+
| | | | /----- 484166 [Arabidopsis lyrata] (12)
| | | | /-100+
| | | | | \----- Araha.5101s0010.1.p [Arabidopsis halleri] (15)
| | | \----100---+
| | | \---------- AT2G02540.1 [Arabidopsis thaliana] (51)
| | |
| | \---------------------------------------------- AA53G00712 [Aethionema arabicum] (37)
| |
| \--------------------------------------------------------- AA14G00044 [Aethionema arabicum] (60)
|
| /----- XP_009117900.1 [Brassica rapa] (7)
--55-+ /-100+
| | \----- GSBRNA2T00010909001 [Brassica napus] (16)
| /-100+
| | | /----- GSBRNA2T00136551001 [Brassica napus] (45)
| | \-100+
| /-100-+ \----- XP_013599913.1 [Brassica oleracea] (62)
| | |
| | | /----- RrC8190_p2 [Raphanus raphanistrum] (14)
|-------------------66-------------------+ \----96---+
| | \----- Rsa1.0_16659.1_g00001.1 [Raphanus sativus] (48)
| |
| \--------------------- Tp1g12810 [Thellungiella parvula] (35)
|
| /--------------------- 676746982 [Sisymbrium irio] (10)
| |
| | /----- GSBRNA2T00067727001 [Brassica napus] (13)
| | /-100+
| | | \----- XP_013639012.1 [Brassica oleracea] (53)
\-------------------90-------------------+ |
| /-100+---------- GSBRNA2T00081698001 [Brassica napus] (24)
| | |
| | \---------- XP_009148819.1 [Brassica rapa] (55)
\-100-+
| /----- Rsa1.0_00453.1_g00003.1 [Raphanus sativus] (33)
\---100---+
\----- RrC180_p3 [Raphanus raphanistrum] (42)
Root part of tree:
/------------------------------------------------------------------- 888821 [Arabidopsis lyrata] (1)
|
|------------------------------------------------------------------- AT1G14440.1 [Arabidopsis thaliana] (40)
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|------------------------------------------------------------------- Araha.23368s0009.1.p [Arabidopsis halleri] (47)
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| /----------- (115)
+ /---------------------100--------------------+
| | \----------- Thhalv10008236m [Eutrema salsugineum] (31)
| |
| | /----------- Carubv10009782m [Capsella rubella] (32)
| | /----100---+
| | | \----------- Cagra.3501s0057.1.p [Capsella grandiflora] (58)
\----100---+ /----95----+
| | \---------------------- Csa14g017460.1 [Camelina sativa] (61)
| |
| /----100----+--------------------------------- Csa03g018170.1 [Camelina sativa] (39)
| | |
\----100---+ \--------------------------------- Csa17g019860.1 [Camelina sativa] (64)
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\--------------------------------------------- Bostr.13671s0007.1.p [Boechera stricta] (59)
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