PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for OGEM3389
Phylogenetic tree for protein ? help Back to Top

      Subtree rooted at node 114:

                                                          /--------------- RrC25441_p1 [Raphanus raphanistrum]                   (3)
                                                          |                           
                                                          |         /----- XP_009134712.1 [Brassica rapa]                        (25)
                                                    /--61-+    /-100+                 
                                                    |     |    |    \----- GSBRNA2T00112014001 [Brassica napus]                  (36)
                                                    |     \-100+                      
                                                    |          |    /----- GSBRNA2T00153671001 [Brassica napus]                  (54)
                                               /-97-+          \-100+                 
                                               |    |               \----- XP_013625316.1 [Brassica oleracea]                    (55)
                                               |    |                                 
                                               |    |               /----- Rsa1.0_04364.1_g00002.1 [Raphanus sativus]            (43)
                                               |    \------100------+                 
                                               |                    \----- RrC14398_p2 [Raphanus raphanistrum]                   (57)
                                               |                                      
                                          /-100+               /---------- GSBRNA2T00011333001 [Brassica napus]                  (13)
                                          |    |               |                      
                                          |    |          /-100+    /----- XP_009118604.1 [Brassica rapa]                        (35)
                                          |    |          |    \-97-+                 
                                          |    |    /-100-+         \----- GSBRNA2T00067646001 [Brassica napus]                  (41)
                                          |    |    |     |                           
                                          |    |    |     \--------------- XP_013617041.1 [Brassica oleracea]                    (28)
                                          |    \-99-+                                 
                                          |         |               /----- Rsa1.0_01233.1_g00009.1 [Raphanus sativus]            (50)
                                     /-100+         \-------98------+                 
                                     |    |                         \----- RrC2943_p1 [Raphanus raphanistrum]                    (56)
                                     |    |                                           
                                     |    |               /--------------- GSBRNA2T00003633001 [Brassica napus]                  (7)
                                     |    |               |                           
                                     |    |         /-100-+    /---------- XP_009147316.1 [Brassica rapa]                        (8)
                                     |    |         |     |    |                      
                                     |    |         |     \-100+    /----- XP_013587446.1 [Brassica oleracea]                    (10)
                                /-100+    |         |          \-100+                 
                                |    |    \---100---+               \----- GSBRNA2T00041349001 [Brassica napus]                  (40)
                                |    |              |                                 
                                |    |              |               /----- Rsa1.0_00194.1_g00021.1 [Raphanus sativus]            (44)
                                |    |              \------100------+                 
                           /-100+    |                              \----- RrC2269_p4 [Raphanus raphanistrum]                    (59)
                           |    |    |                                                
                           |    |    \------------------------------------ 676731062 [Sisymbrium irio]                           (27)
                           |    |                                                     
                           |    \----------------------------------------- Tp3g01860 [Thellungiella parvula]                     (22)
                           |                                                          
                           |                                   /---------- AT3G02830.1 [Arabidopsis thaliana]                    (6)
                           |                                   |                      
                           |                              /-100+    /----- Araha.4629s0007.1.p [Arabidopsis halleri]             (30)
                     /--83-+                              |    \-93-+                 
                     |     |                        /--70-+         \----- 477525 [Arabidopsis lyrata]                           (61)
                     |     |                        |     |                           
                     |     |                        |     \--------------- Bostr.1460s0202.1.p [Boechera stricta]                (21)
                     |     |                        |                                 
                     |     |                   /-84-+               /----- Carubv10013873m [Capsella rubella]                    (12)
                     |     |                   |    |          /-100+                 
                     |     |                   |    |          |    \----- Cagra.1194s0020.1.p [Capsella grandiflora]            (20)
                /-100+     |                   |    \----100---+                      
                |    |     \--------100--------+               |    /----- Csa19g004940.1 [Camelina sativa]                      (17)
                |    |                         |               \-100+                 
                |    |                         |                    \----- Csa01g002440.1 [Camelina sativa]                      (62)
                |    |                         |                                      
           /-100+    |                         \-------------------------- KFK37691.1 [Arabis alpina]                            (64)
           |    |    |                                                                
           |    |    \---------------------------------------------------- Thhalv10020900m [Eutrema salsugineum]                 (4)
           |    |                                                                     
           |    \--------------------------------------------------------- AA10G00330 [Aethionema arabicum]                      (14)
           |                                                                          
           |                                                        /----- Cagra.0434s0021.1.p [Capsella grandiflora]            (9)
           |                                              /---100---+                 
           |                                              |         \----- Carubv10001057m [Capsella rubella]                    (15)
           |                                              |                           
           |                                        /-100-+         /----- Csa20g024410.1 [Camelina sativa]                      (19)
           |                                        |     |    /-96-+                 
           |                                        |     |    |    \----- Csa08g008710.1 [Camelina sativa]                      (23)
      --100+                                   /-100+     \-100+                      
           |                                   |    |          \---------- Csa13g019330.1 [Camelina sativa]                      (34)
           |                                   |    |                                 
           |                                   |    \--------------------- Bostr.2902s0390.1.p [Boechera stricta]                (24)
           |                              /-84-+                                      
           |                              |    |                    /----- 488510 [Arabidopsis lyrata]                           (38)
           |                              |    |               /-100+                 
           |                              |    |               |    \----- Araha.0152s0012.1.p [Arabidopsis halleri]             (52)
           |                         /-100+    \------100------+                      
           |                         |    |                    \---------- AT5G16540.1 [Arabidopsis thaliana]                    (42)
           |                         |    |                                           
           |                         |    |                         /----- KFK25872.1 [Arabis alpina]                            (46)
           \-----------100-----------+    \------------90-----------+                 
                                     |                              \----- Thhalv10013743m [Eutrema salsugineum]                 (63)
                                     |                                                
                                     \------------------------------------ AA40G00457 [Aethionema arabicum]                      (48)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- Gorai.012G028600.1 [Gossypium raimondii]              (1)
      |                                                                               
      |------------------------------------------------------------------- Cotton_A_16011_BGI-A2_v1.0 [Gossypium arboreum]       (33)
      |                                                                               
      |                                                        /---------- Gorai.004G261700.1 [Gossypium raimondii]              (2)
      |                                               /---100--+                      
      |                                               |        \---------- Gh_D08G2380 [Gossypium hirsutum]                      (32)
      |                            /--------100-------+                               
      |                            |                  |        /---------- Cotton_A_05774_BGI-A2_v1.0 [Gossypium arboreum]       (16)
      |                            |                  \---100--+                      
      |                            |                           \---------- Gh_A08G1987 [Gossypium hirsutum]                      (51)
      |                            |                                                  
      +                            |                           /---------- Gorai.013G179800.1 [Gossypium raimondii]              (5)
      |         /--------72--------+                  /---100--+                      
      |         |                  |                  |        \---------- Gh_D13G1641 [Gossypium hirsutum]                      (53)
      |         |                  |        /---100---+                               
      |         |                  |        |         |        /---------- Cotton_A_21942_BGI-A2_v1.0 [Gossypium arboreum]       (26)
      |         |                  |        |         \---100--+                      
      |         |                  \---87---+                  \---------- Gh_A13G1333 [Gossypium hirsutum]                      (47)
      |         |                           |                                         
      |         |                           \----------------------------- Thecc1EG025260t1 [Theobroma cacao]                    (45)
      |         |                                                                     
      |         |                                     /------------------- (114)
      \---100---+                                     |                               
                |                           /---100---+        /---------- XP_010558591.1 [Tarenaya hassleriana]                 (31)
                |                           |         \---100--+                      
                |                  /---66---+                  \---------- XP_010525081.1 [Tarenaya hassleriana]                 (60)
                |                  |        |                                         
                |                  |        \----------------------------- evm.model.supercontig_39.3 [Carica papaya]            (18)
                |        /----57---+                                                  
                |        |         |                           /---------- EcC047140.20 [Eucalyptus camaldulensis]               (29)
                |        |         \------------100------------+                      
                |        |                                     \---------- Eucgr.B01407.1.p [Eucalyptus grandis]                 (37)
                \---100--+                                                            
                         |                                     /---------- orange1.1g047248m [Citrus sinensis]                   (11)
                         |                            /---100--+                      
                         |                            |        \---------- Ciclev10011741m [Citrus clementina]                   (58)
                         \-------------100------------+                               
                                                      |        /---------- Neem_28308_f_1 [Azadirachta indica]                   (39)
                                                      \---100--+                      
                                                               \---------- Neem_7582_f_1 [Azadirachta indica]                    (49)