![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM3493
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 107:
/---------------------------------------------- AA53G00003 [Aethionema arabicum] (2)
|
| /--------------- RrC2888_p2 [Raphanus raphanistrum] (3)
| |
| | /----- XP_013595821.1 [Brassica oleracea] (24)
| /-100-+ /-100+
| | | | \----- GSBRNA2T00105754001 [Brassica napus] (47)
| | \-100+
| | | /----- XP_009102667.1 [Brassica rapa] (44)
| | \-100+
| | \----- GSBRNA2T00128453001 [Brassica napus] (59)
| |
| | /----- XP_013584442.1 [Brassica oleracea] (11)
| | /-100+
| | | \----- GSBRNA2T00093246001 [Brassica napus] (35)
| | /-100+
| /------100-----+ | | /----- XP_009114993.1 [Brassica rapa] (22)
| | | | \-100+
| | |-100-+ \----- GSBRNA2T00113874001 [Brassica napus] (43)
| | | |
/-100-+ | | | /----- RrC7564_p1 [Raphanus raphanistrum] (19)
| | | | \---100---+
| | | | \----- Rsa1.0_00459.1_g00004.1 [Raphanus sativus] (54)
| | | |
| | | |--------------------- Tp1g27130 [Thellungiella parvula] (12)
| | | |
| | | \--------------------- 676770646 [Sisymbrium irio] (45)
| | |
| | | /----- Csa14g039320.1 [Camelina sativa] (15)
| | | /-69-+
| | /-100+ | \----- Csa14g039330.1 [Camelina sativa] (33)
| | | | /-98-+
| | | | | \---------- Csa03g034750.1 [Camelina sativa] (37)
| | | | /-100-+
| | | | | \--------------- Csa17g048880.1 [Camelina sativa] (34)
| | | | /-100+
| | | | | | /----- Carubv10012336m [Capsella rubella] (41)
| | | | | \------100------+
| | | | | \----- Cagra.1508s0062.1.p [Capsella grandiflora] (48)
| \-100+ | /-100+
/-100+ | | | | /---------- Bostr.15697s0445.1.p [Boechera stricta] (25)
| | | | | | |
| | | | | \-------65------+ /----- 313994 [Arabidopsis lyrata] (55)
| | | \-100+ \-100+
| | | | \----- AT1G31310.1 [Arabidopsis thaliana] (60)
| | | |
| | | \------------------------------- Thhalv10007862m [Eutrema salsugineum] (27)
| | |
| | \----------------------------------------- KFK44903.1 [Arabis alpina] (5)
| |
| | /----- 676788192 [Sisymbrium irio] (6)
| | /-100+
| | | \----- Tp4g17890 [Thellungiella parvula] (23)
| | /-78-+
| | | \---------- KFK36461.1 [Arabis alpina] (58)
| | /-------93------+
| | | \--------------- Thhalv10016925m [Eutrema salsugineum] (20)
/-99-+ | |
| | | | /----- AT2G35640.1 [Arabidopsis thaliana] (16)
| | | | /---------100--------+
| | \---------100--------+ | \----- 345299 [Arabidopsis lyrata] (18)
| | | |
| | | | /---------- Csa04g049030.1 [Camelina sativa] (17)
| | | | |
| | \-100+ /-100+ /----- Csa05g018570.1 [Camelina sativa] (39)
| | | | \-98-+
| | | /-100-+ \----- Csa06g038200.1 [Camelina sativa] (51)
| | | | |
| | \-100+ \--------------- Carubv10023521m [Capsella rubella] (52)
| | |
| | \--------------------- Bostr.23794s0534.1.p [Boechera stricta] (36)
| |
| | /----- XP_010518983.1 [Tarenaya hassleriana] (28)
| \------------------------100------------------------+
| \----- XP_010540683.1 [Tarenaya hassleriana] (62)
--100+
| /--------------- Cotton_A_37864_BGI-A2_v1.0 [Gossypium arboreum] (4)
| |
| /-100-+ /---------- Gh_A01G1188 [Gossypium hirsutum] (13)
| | | |
| | \-91-+ /----- Gorai.002G169000.1 [Gossypium raimondii] (29)
| /-100+ \-97-+
| | | \----- Gh_D01G1355 [Gossypium hirsutum] (53)
| | |
| /-100+ \--------------------- Thecc1EG011136t1 [Theobroma cacao] (32)
| | |
| /-97-+ \-------------------------- evm.model.supercontig_2.95 [Carica papaya] (61)
| | |
| /-75-+ \------------------------------- Eucgr.D01036.1.p [Eucalyptus grandis] (14)
| | |
| | \------------------------------------ evm.model.supercontig_192.2 [Carica papaya] (49)
| |
\---------60---------+ /----- orange1.1g040756m [Citrus sinensis] (9)
| /-100+
| | \----- Ciclev10017689m [Citrus clementina] (40)
\--------------99--------------+
\---------- Neem_10073_f_1 [Azadirachta indica] (46)
Root part of tree:
/------------------------------------------------------------------- Gh_D05G1379 [Gossypium hirsutum] (1)
|
|------------------------------------------------------------------- Gorai.009G150000.1 [Gossypium raimondii] (8)
|
| /--------------------------------- (107)
| |
| | /----------- Gorai.011G050400.1 [Gossypium raimondii] (26)
| /-----89----+ /----100---+
| | | | \----------- Gh_D10G0445 [Gossypium hirsutum] (50)
| | \----100---+
+ | | /----------- Gh_A10G0429 [Gossypium hirsutum] (56)
| | \----100---+
| | \----------- Cotton_A_08607_BGI-A2_v1.0 [Gossypium arboreum] (57)
| |
| /----100---+ /----------- Gorai.010G171500.1 [Gossypium raimondii] (7)
| | | /----100---+
| | | | \----------- Gh_D06G1550 [Gossypium hirsutum] (38)
| | | /----100---+
| | | | | /----------- Cotton_A_34013_BGI-A2_v1.0 [Gossypium arboreum] (21)
| | | | \----100---+
\----100---+ \-----99----+ \----------- Gh_A06G1228 [Gossypium hirsutum] (42)
| |
| \--------------------------------- Thecc1EG029325t1 [Theobroma cacao] (31)
|
| /----------- Cotton_A_35310_BGI-A2_v1.0 [Gossypium arboreum] (10)
\---------------------100--------------------+
\----------- Gh_A05G1202 [Gossypium hirsutum] (30)
|




