 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM355
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 259:
/----- Csa10g017480.1 [Camelina sativa] (3)
/-58-+
| \----- Csa18975s010.1 [Camelina sativa] (30)
|
/-100+---------- Csa12g027700.1 [Camelina sativa] (61)
| |
| \---------- Csa11g019080.1 [Camelina sativa] (118)
/-99-+
| | /----- Carubv10006809m [Capsella rubella] (89)
| \----99---+
/-74-+ \----- Cagra.2248s0025.1.p [Capsella grandiflora] (94)
| |
| | /----- 492279 [Arabidopsis lyrata] (63)
/-70-+ \------88------+
| | \----- AT4G25470.1 [Arabidopsis thaliana] (179)
| |
/----70----+ \------------------------- AT4G25490.1 [Arabidopsis thaliana] (136)
| |
| \------------------------------ AT4G25480.1 [Arabidopsis thaliana] (163)
|
| /----- RrC945_p1 [Raphanus raphanistrum] (4)
| /---100---+
| | \----- Rsa1.0_07962.1_g00002.1 [Raphanus sativus] (53)
| |
| /-100+ /----- XP_013603191.1 [Brassica oleracea] (22)
| | | /-100+
| | | | \----- GSBRNA2T00046715001 [Brassica napus] (41)
| | \-100+
| | | /----- XP_009109209.1 [Brassica rapa] (38)
| | \-100+
| /-100+ \----- GSBRNA2T00006794001 [Brassica napus] (86)
| | |
| | | /----- Rsa1.0_04408.1_g00002.1 [Raphanus sativus] (13)
| | | /-100+
| | | | \----- RrC338_p6 [Raphanus raphanistrum] (170)
| | \---100---+
| /-100+ \---------- Rsa1.0_04408.1_g00001.1 [Raphanus sativus] (160)
| | |
| | | /----- GSBRNA2T00006790001 [Brassica napus] (39)
| | | /----93---+
| | | | \----- XP_009109208.1 [Brassica rapa] (181)
| | | |
| | \---100---+ /----- GSBRNA2T00051173001 [Brassica napus] (71)
| | | /-98-+
| | | | \----- GSBRNA2T00006792001 [Brassica napus] (135)
| | \-78-+
| /--85-+ \---------- XP_013602884.1 [Brassica oleracea] (161)
| | |
| | | /--------------- Rsa1.0_00101.1_g00039.1 [Raphanus sativus] (10)
| | | |
| | | | /----- XP_013595243.1 [Brassica oleracea] (132)
| | | /-63-+ /-100+
| | | | | | \----- GSBRNA2T00154525001 [Brassica napus] (173)
| | | | \-100+
| | | | | /----- GSBRNA2T00004603001 [Brassica napus] (142)
| | | | \-100+
| | \---100---+ \----- XP_009137527.1 [Brassica rapa] (165)
| | |
|-97-+ | /----- XP_013625813.1 [Brassica oleracea] (26)
| | | /-100+
/-74-+ | | | \----- GSBRNA2T00051180001 [Brassica napus] (27)
| | | \----99---+
| | | | /----- XP_009132706.1 [Brassica rapa] (91)
| | | \-100+
| | | \----- GSBRNA2T00142189001 [Brassica napus] (178)
| | |
| | | /----- Thhalv10027405m [Eutrema salsugineum] (40)
| | |--------------50--------------+
| | | \----- Tp7g23510 [Thellungiella parvula] (77)
| | |
| | \------------------------------------ 676745738 [Sisymbrium irio] (155)
| |
| | /-------------------- Bostr.7867s0361.1.p [Boechera stricta] (9)
| | |
| | | /----- Carubv10005709m [Capsella rubella] (25)
| | /-89-+ /---100---+
| | | | | \----- Cagra.28753s0001.1.p [Capsella grandiflora] (48)
| | | | |
| | | \-98-+ /----- Csa10g017460.1 [Camelina sativa] (92)
| | | | /-89-+
| |-------89------+ | | \----- Csa11g019070.1 [Camelina sativa] (127)
| | | \-99-+
| | | \---------- Csa12g027680.1 [Camelina sativa] (121)
| | |
| | \------------------------- Bostr.7867s0359.1.p [Boechera stricta] (43)
| |
| | /---------- AA386G00001 [Aethionema arabicum] (46)
| | |
| |--------------100-------------+ /----- AA386G00002 [Aethionema arabicum] (75)
| | \-98-+
| | \----- AA1225G00001 [Aethionema arabicum] (166)
| |
| | /--------------- Bostr.7867s0360.1.p [Boechera stricta] (60)
| | |
| | | /----- Csa12g027690.1 [Camelina sativa] (129)
/-50-+ |------------94-----------+ /-100+
| | | | | \----- Csa10g017470.1 [Camelina sativa] (148)
| | | \-100+
| | | | /----- Cagra.2248s0026.1.p [Capsella grandiflora] (137)
| | | \-100+
| | | \----- Carubv10006965m [Capsella rubella] (152)
| | |
| | | /----- KFK29049.1 [Arabis alpina] (80)
| | \----------------100----------------+
| | \----- KFK29051.1 [Arabis alpina] (95)
| |
| | /----- XP_009106963.1 [Brassica rapa] (32)
| | /-97-+
| | | \----- GSBRNA2T00110233001 [Brassica napus] (83)
| | /-94-+
| | | | /----- GSBRNA2T00050697001 [Brassica napus] (139)
| | | \-100+
| | /-100+ \----- XP_013608925.1 [Brassica oleracea] (153)
| | | |
| | | | /----- Rsa1.0_06013.1_g00002.1 [Raphanus sativus] (73)
| | /-96-+ \---100---+
| | | | \----- RrC5734_p3 [Raphanus raphanistrum] (88)
| | | |
| | /-67-+ \-------------------- 676736816 [Sisymbrium irio] (184)
| | | |
/-73-+ | /----97----+ \------------------------- Tp6g14240 [Thellungiella parvula] (124)
| | | | |
| | | | \------------------------------ Thhalv10015252m [Eutrema salsugineum] (140)
| | | |
| | | | /-------------------- Bostr.15774s0346.1.p [Boechera stricta] (37)
| | | | |
| | | | | /----- Csa02g044960.1 [Camelina sativa] (55)
| | | | | /-59-+
| | | | /-68-+ | \----- Csa18g022870.1 [Camelina sativa] (190)
| | | | | | /-100+
| | \-100+ | | | \---------- Csa11g083630.1 [Camelina sativa] (79)
| | | | \-100+
| | | | | /----- Carubv10027759m [Capsella rubella] (119)
| | | /-69-+ \---100---+
/-80-+ | | | | \----- Cagra.0094s0011.1.p [Capsella grandiflora] (159)
| | | | | |
| | | | | | /----- 918237 [Arabidopsis lyrata] (50)
| | | | /--94-+ \---------89--------+
| | | | | | \----- Araha.16901s0006.1.p [Arabidopsis halleri] (175)
| | | | | |
| | | \-99-+ \------------------------------ AT5G51990.1 [Arabidopsis thaliana] (170)
| | | |
| | | \------------------------------------ KFK26806.1 [Arabis alpina] (67)
--65-+ | |
| | \--------------------------------------------------- AA55G00050 [Aethionema arabicum] (125)
| |
| | /----- XP_010519227.1 [Tarenaya hassleriana] (42)
| \------------------------100-----------------------+
| \----- XP_010536489.1 [Tarenaya hassleriana] (116)
|
| /----- Ciclev10007068m [Citrus clementina] (49)
\--------------------------100--------------------------+
\----- orange1.1g028094m [Citrus sinensis] (171)
Root part of tree:
/------------------------------------------------------------------ Cotton_A_23603_BGI-A2_v1.0 [Gossypium arboreum] (1)
|
| /----- Ciclev10021923m [Citrus clementina] (2)
| /-100-+
| | \----- orange1.1g026103m [Citrus sinensis] (35)
| /---------------------51--------------------+
| | | /----- orange1.1g029015m [Citrus sinensis] (44)
| | \-100-+
| | \----- Ciclev10022680m [Citrus clementina] (100)
| |
| | /------------------------------------------------- (259)
| | |
| | | /----- EcC053277.10 [Eucalyptus camaldulensis] (5)
| | |--------------------100--------------------+
| | | \----- Eucgr.E00529.1.p [Eucalyptus grandis] (68)
| | |
| | | /----- Csa16g055750.1 [Camelina sativa] (6)
| | | /--84-+
| | | | \----- Csa09g097740.1 [Camelina sativa] (58)
| | | /-100+
| | | | \----------- Csa07g064360.1 [Camelina sativa] (45)
| | | /--72-+
| | | | | /----- 475045 [Arabidopsis lyrata] (15)
| | | | \----99----+
| | | | \----- AT1G63030.1 [Arabidopsis thaliana] (150)
| | | /-99-+
| | | | | /----- Carubv10021910m [Capsella rubella] (21)
| | | | | /-100-+
| | | | | | \----- Cagra.23885s0001.1.p [Capsella grandiflora] (145)
| | | | \----100---+
| | | | \----------- Bostr.22157s0019.1.p [Boechera stricta] (167)
| | | /----97----+
| | | | | /---------------- Thhalv10023865m [Eutrema salsugineum] (14)
| | | | | |
| | | | | | /----------- 676708482 [Sisymbrium irio] (18)
| | | | | | |
| | | | \----72----+-99-+ /----- GSBRNA2T00092570001 [Brassica napus] (90)
| | | | | \-100-+
| | | | | \----- XP_009112988.1 [Brassica rapa] (126)
| | | | |
| | | | \---------------- Tp2g01550 [Thellungiella parvula] (154)
| | | |
| | | | /----- KFK43527.1 [Arabis alpina] (7)
| | | | /----------58---------+
| | | | | \----- Thhalv10009978m [Eutrema salsugineum] (180)
| | | | |
| | | | | /---------------- 676755244 [Sisymbrium irio] (23)
| | | | | |
| | | | | | /----- Rsa1.0_00018.1_g00063.1 [Raphanus sativus] (28)
| | | | | /--91-+ /-100-+
| | | | | | | | \----- XP_009148577.1 [Brassica rapa] (87)
| | | | | | \-100+
| | | | | | | /----- GSBRNA2T00020533001 [Brassica napus] (54)
| | | | | | \-100-+
| | | | | | \----- XP_013584138.1 [Brassica oleracea] (130)
| | | | | |
| | | | | |---------------------- Tp1g11200 [Thellungiella parvula] (52)
| | | | |-66-+
| | | | | | /----- GSBRNA2T00035441001 [Brassica napus] (110)
| | | | | | /-100-+
| | | | /--93-+ | | \----- XP_009118070.1 [Brassica rapa] (147)
| | | | | | | /-100+
| | | | | | | | | /----- XP_013602812.1 [Brassica oleracea] (114)
| | | | | | | | \-100-+
| | | /--63-+ | | \-100-+ \----- GSBRNA2T00090402001 [Brassica napus] (168)
| | | | | | | |
| | | | | | | | /----- Rsa1.0_02733.1_g00005.1 [Raphanus sativus] (128)
| | | | | | | \----100---+
| | | | | | | \----- RrC621_p7 [Raphanus raphanistrum] (134)
| | | | | | |
| | | | | | | /----- XP_013615000.1 [Brassica oleracea] (56)
| | | | | | | /-100-+
| | | | | | | | \----- GSBRNA2T00047424001 [Brassica napus] (115)
| | | | | | | |
| | | | | | | /-100+----------- XP_009110634.1 [Brassica rapa] (76)
| | | | | | | | |
| | | | |-92-+ \----100---+ \----------- GSBRNA2T00011613001 [Brassica napus] (172)
| | | | | | |
| | | | | | \---------------- Rsa1.0_00020.1_g00036.1 [Raphanus sativus] (97)
| | | | | |
| | | | | | /----------- Csa03g016350.1 [Camelina sativa] (19)
| | | | | | |
| | |-92-+ | | /-100+ /----- Csa14g015500.1 [Camelina sativa] (57)
| | | | | | | \--86-+
| | | | | | | \----- Csa17g016820.1 [Camelina sativa] (70)
| | | | | | /--96-+
| | | | | | | | /----- Cagra.0568s0171.1.p [Capsella grandiflora] (36)
| | | | | | | \----100---+
| | | | | | /-100+ \----- Carubv10010303m [Capsella rubella] (96)
| | | | | | | |
| | | | | | | \---------------------- Bostr.13671s0200.1.p [Boechera stricta] (162)
| | | | | \--98-+
| | | | | | /----- AT1G12610.1 [Arabidopsis thaliana] (111)
| | | | | \---------100---------+
| | | | | \----- 471409 [Arabidopsis lyrata] (112)
| | | | |
| | | | \-------------------------------------- AA65G00303 [Aethionema arabicum] (123)
| | | |
| | | | /----- XP_010546028.1 [Tarenaya hassleriana] (11)
| | | \------------------100-----------------+
| | | \----- XP_010533717.1 [Tarenaya hassleriana] (24)
| | |
| | | /----- EcC050875.20 [Eucalyptus camaldulensis] (8)
| | | /----100---+
| |--51-+ | \----- Eucgr.A02821.1.p [Eucalyptus grandis] (164)
| /-59-+ | |
| | | | /--97-+ /----- EcC075234.10 [Eucalyptus camaldulensis] (149)
| | | | | | /--82-+
| | | | | | | \----- EcC036992.10 [Eucalyptus camaldulensis] (174)
| | | | | \-99-+
+ | | | | \----------- Eucgr.A02822.1.p [Eucalyptus grandis] (186)
| | | | /-89-+
| | | | | | /----------- Eucgr.A02834.1.p [Eucalyptus grandis] (12)
| | | | | | |
| | | | | | /-99-+ /----- Eucgr.A02831.1.p [Eucalyptus grandis] (34)
| | | | | | | \-100-+
| | | | /--64-+ \-100-+ \----- Eucgr.A02827.1.p [Eucalyptus grandis] (160)
| | | | | | |
| | | | | | \---------------- Eucgr.A02825.1.p [Eucalyptus grandis] (176)
| | | | | |
| | | | | \--------------------------- Eucgr.A02823.1.p [Eucalyptus grandis] (182)
| | | | /-99-+
| | | | | | /----- Eucgr.A02824.1.p [Eucalyptus grandis] (17)
| | | | | | /----100---+
| | | | | | | \----- Eucgr.A02826.1.p [Eucalyptus grandis] (113)
| | | | | | |
| | | | | \-------100------+ /----- Eucgr.A02830.1.p [Eucalyptus grandis] (29)
| | | | | | /-100-+
| | | | | | | \----- EcC048255.10 [Eucalyptus camaldulensis] (99)
| | | | /--99-+ \-100+
| | | | | | | /----- EcS547884.10 [Eucalyptus camaldulensis] (122)
| | | | | | \-100-+
| | | | | | \----- Eucgr.A02832.1.p [Eucalyptus grandis] (146)
| | | | | |
| | | |-99-+ |-------------------------------------- EcC035309.30 [Eucalyptus camaldulensis] (180)
| | | | | |
| | | | | \-------------------------------------- Eucgr.A02820.1.p [Eucalyptus grandis] (187)
| | | | |
| | | | | /----- Eucgr.A02818.1.p [Eucalyptus grandis] (72)
| | | | \------------------100-----------------+
| | | | \----- EcC051614.10 [Eucalyptus camaldulensis] (78)
| | | |
| | | | /----- Gh_A01G1782 [Gossypium hirsutum] (16)
| | | | /--61-+
| | | | | \----- Cotton_A_00526_BGI-A2_v1.0 [Gossypium arboreum] (47)
| | | | /----100---+
| | | | | | /----- Gorai.002G241700.1 [Gossypium raimondii] (120)
| | | | | \-100-+
| | | | | \----- Gh_D01G2023 [Gossypium hirsutum] (169)
| | | | |
| | | | | /----- Gh_D04G1001 [Gossypium hirsutum] (20)
| | | | /-93-+ /--95-+
| | | | | | | \----- Gorai.009G406800.1 [Gossypium raimondii] (84)
| | | | | | /-100+
| | | | | | | | /----- Cotton_A_34402_BGI-A2_v1.0 [Gossypium arboreum] (82)
| | | | | | | \--84-+
| | | | | \--95-+ \----- Gh_A04G1386 [Gossypium hirsutum] (85)
| | | | | |
| | | | /--75-+ \---------------- Thecc1EG022481t1 [Theobroma cacao] (31)
|--97-+ | | | |
| | | | | | /----- EcC011959.10 [Eucalyptus camaldulensis] (69)
| | | | | | /----100---+
| | | | | | | \----- Eucgr.K02069.1.p [Eucalyptus grandis] (117)
| | | | | | |
| | | |-------82------+ \----76----+ /----- orange1.1g038285m [Citrus sinensis] (93)
| | | | | | /-100-+
| | | | | | | \----- Ciclev10013766m [Citrus clementina] (138)
| | | | | \-100+
| | | | | \----------- Neem_14718_f_1 [Azadirachta indica] (151)
| | | | |
| | | | \--------------------------------- evm.model.supercontig_5.66 [Carica papaya] (157)
| | | |
| | | | /----- Gh_A11G0080 [Gossypium hirsutum] (62)
| | | | /-100-+
| | | | | \----- Cotton_A_07547_BGI-A2_v1.0 [Gossypium arboreum] (131)
| | | | /----100---+
| | | | | | /----- Gh_D11G0085 [Gossypium hirsutum] (64)
| | | | | \--95-+
| | | | | \----- Gorai.007G010100.1 [Gossypium raimondii] (81)
| | | | |
| | | | | /----- Gorai.008G280600.1 [Gossypium raimondii] (65)
| | | |------------95------------+ /--97-+
| | | | | | \----- Gh_D12G2494 [Gossypium hirsutum] (150)
| | | | | /-100+
| | | | | | | /----- Cotton_A_01342_BGI-A2_v1.0 [Gossypium arboreum] (66)
| | | | | | \--89-+
| | | | | | \----- Gh_A12G2357 [Gossypium hirsutum] (177)
| | | | \-100-+
| | | | | /----- Gh_A09G0380 [Gossypium hirsutum] (120)
| | | | | /-100-+
| | | | | | \----- Cotton_A_39051_BGI-A2_v1.0 [Gossypium arboreum] (156)
| | | | \-100+
| | | | | /----- Gorai.006G046200.1 [Gossypium raimondii] (133)
| | | | \--64-+
| | | | \----- Gh_D09G0401 [Gossypium hirsutum] (185)
| | | |
| | | |------------------------------------------------- Eucgr.D01925.1.p [Eucalyptus grandis] (140)
| | | |
| | | \------------------------------------------------- evm.model.supercontig_20.67 [Carica papaya] (130)
| | |
| | |------------------------------------------------------- Neem_11349_f_1 [Azadirachta indica] (33)
| | |
| | |------------------------------------------------------- EcC073803.10 [Eucalyptus camaldulensis] (51)
| | |
| | \------------------------------------------------------- evm.model.supercontig_74.84 [Carica papaya] (144)
| |
| | /----- Gorai.008G243600.1 [Gossypium raimondii] (59)
| | /--89-+
| | | \----- Gh_D12G2235 [Gossypium hirsutum] (98)
| | /-100+
| | | | /----- Cotton_A_14437_BGI-A2_v1.0 [Gossypium arboreum] (143)
| | | \--98-+
| \---------------------96--------------------+ \----- Gh_A12G2057 [Gossypium hirsutum] (183)
| |
| \---------------- Thecc1EG016175t1 [Theobroma cacao] (74)
|
| /----- Gh_D03G1486 [Gossypium hirsutum] (110)
| /--97-+
| | \----- Gorai.003G162700.1 [Gossypium raimondii] (141)
\--------------------------94--------------------------+
\----------- Gh_A03G2017 [Gossypium hirsutum] (158)
|
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|