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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM358
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 320:
/----- RrC8755_p1 [Raphanus raphanistrum] (2)
/---100---+
| \----- Rsa1.0_03967.1_g00001.1 [Raphanus sativus] (110)
|
/-97-+ /----- XP_013621765.1 [Brassica oleracea] (41)
| | /-100+
| | | \----- GSBRNA2T00132574001 [Brassica napus] (183)
| \-100+
/-97-+ | /----- XP_009133198.1 [Brassica rapa] (90)
| | \-100+
| | \----- GSBRNA2T00124909001 [Brassica napus] (128)
/-84-+ |
| | \-------------------- 676781366 [Sisymbrium irio] (54)
| |
/--90-+ \------------------------- Tp4g20010 [Thellungiella parvula] (14)
| |
| \------------------------------ Thhalv10016318m [Eutrema salsugineum] (121)
|
| /------------------------- AT2G37650.1 [Arabidopsis thaliana] (20)
| |
/-76-+ | /----- Csa06g040410.1 [Camelina sativa] (27)
| | | /-82-+
| | | | \----- Csa04g051280.1 [Camelina sativa] (30)
| | | /-100+
| | | | \---------- Csa05g016030.1 [Camelina sativa] (82)
| \----78----+ |
| | | /----- Carubv10025657m [Capsella rubella] (71)
| | /-82-+---100---+
| | | | \----- Cagra.18121s0006.1.p [Capsella grandiflora] (77)
/-84-+ | | |
| | | | \--------------- Bostr.23794s0312.1.p [Boechera stricta] (180)
| | \-66-+
| | | /----- 345509 [Arabidopsis lyrata] (83)
| | | /-100+
| | | | \----- 345506 [Arabidopsis lyrata] (181)
/-76-+ | \----94---+
| | | \---------- Araha.14454s0001.1.p [Arabidopsis halleri] (137)
| | |
| | \----------------------------------------- AA60G00002 [Aethionema arabicum] (55)
| |
| \---------------------------------------------- XP_010528437.1 [Tarenaya hassleriana] (167)
|
| /--------------- Thecc1EG021920t1 [Theobroma cacao] (51)
| |
| | /----- Gh_D11G3303 [Gossypium hirsutum] (65)
|-----------------89----------------+ /-100+
| | | \----- Gorai.007G376400.1 [Gossypium raimondii] (187)
/-54-+ \-90-+
| | | /----- Gh_A11G2918 [Gossypium hirsutum] (160)
| | \-88-+
| | \----- Cotton_A_05556_BGI-A2_v1.0 [Gossypium arboreum] (119)
| |
| | /----- Ciclev10011140m [Citrus clementina] (126)
| | /-100+
| | | \----- orange1.1g004514m [Citrus sinensis] (133)
| |-------------------98-------------------+
| | \---------- Neem_7049_f_12 [Azadirachta indica] (142)
| |
| | /----- Eucgr.A01279.1.p [Eucalyptus grandis] (140)
| \---------------------100---------------------+
| \----- EcC047836.40 [Eucalyptus camaldulensis] (178)
|
| /----- Eucgr.K03118.1.p [Eucalyptus grandis] (12)
| /-86-+
| | \----- Eucgr.K03122.1.p [Eucalyptus grandis] (175)
| /-64-+
/-51-+ | \---------- EcC052746.20 [Eucalyptus camaldulensis] (140)
| | |
| | /------91------+--------------- EcC051768.10 [Eucalyptus camaldulensis] (84)
| | | |
| | | \--------------- Eucgr.K03126.1.p [Eucalyptus grandis] (148)
| | |
| | | /----- EcC032073.80 [Eucalyptus camaldulensis] (18)
| | | /------97------+
| | | | \----- Eucgr.K03117.1.p [Eucalyptus grandis] (37)
| | | |
| | /--68-+ | /----- EcC049756.10 [Eucalyptus camaldulensis] (21)
| | | | /-76-+ /-99-+
| | | | | | | \----- EcC007135.10 [Eucalyptus camaldulensis] (173)
| | | | | | /-94-+
| | | | | | | \---------- Eucgr.L02817.1.p [Eucalyptus grandis] (117)
| | | | | \-80-+
| | | | | | /----- Eucgr.K03119.1.p [Eucalyptus grandis] (115)
| | | \-64-+ \----88---+
| | | | \----- EcC035781.10 [Eucalyptus camaldulensis] (152)
| \---------83--------+ |
| | | /----- EcC072043.10 [Eucalyptus camaldulensis] (150)
| | | /-85-+
| | | | \----- EcC052419.10 [Eucalyptus camaldulensis] (174)
| | \------95------+
| | \---------- Eucgr.K03127.1.p [Eucalyptus grandis] (123)
| |
| | /----- Eucgr.K03128.1.p [Eucalyptus grandis] (24)
| \--------------97--------------+
| \----- EcC053575.100 [Eucalyptus camaldulensis] (141)
|
| /-------------------- Eucgr.B02349.1.p [Eucalyptus grandis] (3)
| |
| | /----- Eucgr.B02348.1.p [Eucalyptus grandis] (23)
| | /-85-+
| /-63-+ | \----- EcC011030.20 [Eucalyptus camaldulensis] (189)
| | | /-84-+
| | | | \---------- EcC026598.10 [Eucalyptus camaldulensis] (40)
| | \-85-+
| /-85-+ \--------------- Eucgr.B02346.1.p [Eucalyptus grandis] (134)
| | |
| | | /----- EcC046643.30 [Eucalyptus camaldulensis] (75)
| | \--------100--------+
| | \----- Eucgr.B02345.1.p [Eucalyptus grandis] (138)
| |
| | /----- EcC016293.20 [Eucalyptus camaldulensis] (15)
| /--72-+ /-100+
| | | | \----- Eucgr.B02343.1.p [Eucalyptus grandis] (170)
| | | /-50-+
| | | | \---------- Eucgr.B02344.1.p [Eucalyptus grandis] (186)
| | | /-95-+
| | | | \--------------- Eucgr.B02342.1.p [Eucalyptus grandis] (130)
| | \----76---+
|-----------61-----------+ \-------------------- Eucgr.B02340.1.p [Eucalyptus grandis] (39)
| |
| | /----- EcC033125.10 [Eucalyptus camaldulensis] (17)
| | /----96---+
| | | \----- Eucgr.B02330.1.p [Eucalyptus grandis] (190)
| | |
| \---------84---------+ /----- EcC049390.30 [Eucalyptus camaldulensis] (112)
| | /-100+
| | | \----- EcC000151.30 [Eucalyptus camaldulensis] (144)
| \-100+
| \---------- Eucgr.B02337.1.p [Eucalyptus grandis] (129)
|
| /----- Eucgr.B02350.1.p [Eucalyptus grandis] (4)
| /--------100--------+
| | \----- EcC054064.20 [Eucalyptus camaldulensis] (92)
| |
| | /--------------- Eucgr.J02043.1.p [Eucalyptus grandis] (7)
| | |
|-----------------74----------------+ /-100+ /---------- Eucgr.J02041.1.p [Eucalyptus grandis] (38)
| | | | |
| | | \-98-+ /----- Eucgr.J02042.1.p [Eucalyptus grandis] (62)
| | | \-100+
| \-99-+ \----- EcC019605.10 [Eucalyptus camaldulensis] (153)
| |
| | /----- Eucgr.J02044.1.p [Eucalyptus grandis] (79)
| \------100-----+
| \----- EcC018560.10 [Eucalyptus camaldulensis] (80)
|
| /----- Gorai.001G111500.1 [Gossypium raimondii] (5)
| /-100+
| | \----- Gh_D07G0977 [Gossypium hirsutum] (9)
| /-100+
| | | /----- Cotton_A_34382_BGI-A2_v1.0 [Gossypium arboreum] (135)
| | \-100+
| /-70-+ \----- Gh_A07G0906 [Gossypium hirsutum] (185)
| | |
| | \--------------- Thecc1EG041815t1 [Theobroma cacao] (93)
| |
| /-100+ /----- Gh_D03G1190 [Gossypium hirsutum] (99)
| | | /-63-+
| | | | \----- Gorai.003G130600.1 [Gossypium raimondii] (147)
| | \---100---+
| | | /----- Cotton_A_18579_BGI-A2_v1.0 [Gossypium arboreum] (122)
|-----------------78----------------+ \-100+
| | \----- Gh_A03G0364 [Gossypium hirsutum] (176)
| |
| | /----- Neem_745_f_3 [Azadirachta indica] (52)
| \--------100--------+
| \----- Neem_22956_f_1 [Azadirachta indica] (59)
|
| /----- evm.model.supercontig_81.125 [Carica papaya] (8)
| /-61-+
| | \----- evm.model.supercontig_81.124 [Carica papaya] (188)
|------------------------95------------------------+
| \---------- evm.model.supercontig_81.126 [Carica papaya] (72)
|
|------------------------------------------------------------- RrC7696_p2 [Raphanus raphanistrum] (10)
|
|------------------------------------------------------------- 676794972 [Sisymbrium irio] (11)
|
|------------------------------------------------------------- AA32G00790 [Aethionema arabicum] (13)
|
| /----- Csa03g010930.1 [Camelina sativa] (19)
| /-99-+
| | \----- Csa14g008910.1 [Camelina sativa] (69)
| /-100+
| | \---------- Csa17g010900.1 [Camelina sativa] (60)
| /-78-+
| | | /----- Carubv10008390m [Capsella rubella] (22)
| | \---100---+
| /-94-+ \----- Cagra.1671s0373.1.p [Capsella grandiflora] (125)
| | |
| | \-------------------- Bostr.25219s0207.1.p [Boechera stricta] (44)
| /----98----+
| | | /----- Araha.0439s0001.1.p [Arabidopsis halleri] (25)
| | \--------100--------+
| | \----- AT1G07530.1 [Arabidopsis thaliana] (95)
| |
| | /-------------------- 676749926 [Sisymbrium irio] (56)
| | |
| | | /----- XP_009110940.1 [Brassica rapa] (58)
--70-+ | | /-100+
| /-96-+ /-96-+ | \----- GSBRNA2T00089803001 [Brassica napus] (85)
| | | | | /-100+
| | | | | | | /----- XP_013614698.1 [Brassica oleracea] (81)
| | | | | | \-100+
| | | | \-97-+ \----- GSBRNA2T00145066001 [Brassica napus] (98)
| | | /-74-+ |
| | | | | | /----- RrC8_p11 [Raphanus raphanistrum] (150)
|---------85--------+ | | | \---100---+
| | | | | \----- Rsa1.0_00009.1_g00045.1 [Raphanus sativus] (160)
| | \--91-+ |
| | | \------------------------- Tp1g06260 [Thellungiella parvula] (91)
| | |
| | \------------------------------ Thhalv10006868m [Eutrema salsugineum] (143)
| |
| \----------------------------------------- AA90G00078 [Aethionema arabicum] (127)
|
| /----- Gorai.003G130500.1 [Gossypium raimondii] (26)
| /-98-+
| | \----- Gh_D03G1189 [Gossypium hirsutum] (97)
| /-99-+
| | | /----- Gh_A03G0365 [Gossypium hirsutum] (64)
| | \-100+
| | \----- Cotton_A_30654_BGI-A2_v1.0 [Gossypium arboreum] (116)
| /-61-+
| | | /----- Gorai.001G111600.1 [Gossypium raimondii] (48)
| | | /-100+
| | | | \----- Gh_D07G0978 [Gossypium hirsutum] (61)
| | \-100+
| /-91-+ | /----- Cotton_A_34381_BGI-A2_v1.0 [Gossypium arboreum] (111)
| | | \-100+
| | | \----- Gh_A07G0907 [Gossypium hirsutum] (158)
| | |
| | \-------------------- Thecc1EG041814t1 [Theobroma cacao] (157)
|-----------------88----------------+
| | /----- orange1.1g046158m [Citrus sinensis] (67)
| | /-100+
| | | \----- Ciclev10027848m [Citrus clementina] (154)
| \------100-----+
| \---------- Neem_745_f_2 [Azadirachta indica] (164)
|
| /----- GSBRNA2T00088384001 [Brassica napus] (28)
| /-55-+
| | \----- XP_009125052.1 [Brassica rapa] (169)
| /-51-+
| | | /----- GSBRNA2T00017285001 [Brassica napus] (156)
| | \-100+
|----------------------54---------------------+ \----- XP_013636977.1 [Brassica oleracea] (172)
| |
| | /----- RrC7696_p1 [Raphanus raphanistrum] (180)
| \---100---+
| \----- Rsa1.0_01272.1_g00005.1 [Raphanus sativus] (165)
|
| /----- Carubv10024938m [Capsella rubella] (31)
|--------------------------100--------------------------+
| \----- Cagra.3264s0006.1.p [Capsella grandiflora] (145)
|
| /----- Csa16g015880.1 [Camelina sativa] (32)
|--------------------------100--------------------------+
| \----- Csa07g015340.1 [Camelina sativa] (168)
|
| /---------- RrC9364_p1 [Raphanus raphanistrum] (35)
| |
|------------------------76------------------------+ /----- Araha.4848s0003.1.p [Arabidopsis halleri] (73)
| \-100+
| \----- AT2G29065.1 [Arabidopsis thaliana] (166)
|
| /-------------------- Eucgr.B02328.1.p [Eucalyptus grandis] (45)
| |
| | /--------------- Thecc1EG041810t1 [Theobroma cacao] (47)
| | |
|-------------------66-------------------+ | /----- Ciclev10027926m [Citrus clementina] (53)
| | | /-100+
| | | | \----- orange1.1g045051m [Citrus sinensis] (113)
| | |-82-+
| \-64-+ | /----- Ciclev10027940m [Citrus clementina] (131)
| | \-100+
| | \----- orange1.1g045079m [Citrus sinensis] (162)
| |
| |--------------- Neem_30856_f_1 [Azadirachta indica] (110)
| |
| \--------------- evm.model.supercontig_81.122 [Carica papaya] (149)
|
|------------------------------------------------------------- Csa05g035190.1 [Camelina sativa] (46)
|
| /---------- AT2G29060.1 [Arabidopsis thaliana] (49)
| |
|------------------------100-----------------------+ /----- 901864 [Arabidopsis lyrata] (120)
| \-100+
| \----- Araha.4848s0002.1.p [Arabidopsis halleri] (155)
|
|------------------------------------------------------------- Bostr.27991s0167.1.p [Boechera stricta] (57)
|
| /----- Carubv10022816m [Capsella rubella] (63)
| /-97-+
| | \----- Cagra.3264s0007.1.p [Capsella grandiflora] (179)
|------------------------63------------------------+
| \---------- Bostr.27991s0168.1.p [Boechera stricta] (184)
|
| /----- XP_009140961.1 [Brassica rapa] (66)
| /-100+
| | \----- GSBRNA2T00050394001 [Brassica napus] (88)
| /-89-+
| | | /----- GSBRNA2T00127897001 [Brassica napus] (86)
| | \-100+
|----------------------88---------------------+ \----- XP_013633897.1 [Brassica oleracea] (163)
| |
| | /----- RrC10181_p1 [Raphanus raphanistrum] (136)
| \----89---+
| \----- Rsa1.0_00159.1_g00036.1 [Raphanus sativus] (146)
|
|------------------------------------------------------------- Rsa1.0_01272.1_g00004.1 [Raphanus sativus] (68)
|
|------------------------------------------------------------- Tp4g11880 [Thellungiella parvula] (74)
|
|------------------------------------------------------------- GSBRNA2T00088382001 [Brassica napus] (76)
|
|------------------------------------------------------------- 676794970 [Sisymbrium irio] (87)
|
|------------------------------------------------------------- Csa16g015870.1 [Camelina sativa] (96)
|
|------------------------------------------------------------- XP_010521861.1 [Tarenaya hassleriana] (100)
|
|------------------------------------------------------------- Thhalv10016365m [Eutrema salsugineum] (120)
|
| /----- Thhalv10016312m [Eutrema salsugineum] (124)
|---------------------------64--------------------------+
| \----- Tp4g11870 [Thellungiella parvula] (161)
|
|------------------------------------------------------------- Eucgr.J02040.1.p [Eucalyptus grandis] (132)
|
| /----- GSBRNA2T00068063001 [Brassica napus] (139)
\---------------------------68--------------------------+
\----- XP_013636979.1 [Brassica oleracea] (177)
Root part of tree:
/------------------------------------------------------------------ Gorai.011G266200.1 [Gossypium raimondii] (1)
|
|------------------------------------------------------------------ Gh_D10G2285 [Gossypium hirsutum] (94)
|
| /----------------------------- (320)
| |
| | /------- EcC001966.20 [Eucalyptus camaldulensis] (29)
| | /---95--+
| | | \------- Eucgr.G02939.1.p [Eucalyptus grandis] (42)
| /---63--+ /--84--+
| | | | | /------- Eucgr.G02940.1.p [Eucalyptus grandis] (151)
| | | | \---57--+
| | | | \------- Eucgr.G02941.1.p [Eucalyptus grandis] (182)
| | \--66--+
| | | /------- EcC047503.40 [Eucalyptus camaldulensis] (50)
| | | /--100--+
| | | | \------- Eucgr.J01244.1.p [Eucalyptus grandis] (78)
| /--56--+ \--94--+
| | | | /------- EcC022864.20 [Eucalyptus camaldulensis] (130)
+ | | \---99--+
| | | \------- Eucgr.J01242.1.p [Eucalyptus grandis] (159)
| | |
| | | /------- orange1.1g004488m [Citrus sinensis] (36)
| | | /---99--+
| /--74--+ | | \------- Ciclev10030787m [Citrus clementina] (114)
| | | \----------91---------+
| | | | /------- Neem_92_f_1 [Azadirachta indica] (70)
| | | \--100--+
| | | \------- Neem_31775_f_1 [Azadirachta indica] (89)
| | |
| | \-------------------------------------------- evm.model.supercontig_1.422 [Carica papaya] (118)
| /---96--+
| | | /------- Gh_D06G1801 [Gossypium hirsutum] (16)
| | | /--100--+
| | | | \------- Gorai.010G201000.1 [Gossypium raimondii] (43)
| | | /--99--+
| | | | | /------- Gh_A06G1468 [Gossypium hirsutum] (34)
\--71--+ | | \--100--+
| \-------------84-------------+ \------- Cotton_A_22965_BGI-A2_v1.0 [Gossypium arboreum] (170)
| |
| \---------------------- Thecc1EG042705t1 [Theobroma cacao] (33)
|
| /------- Cotton_A_30927_BGI-A2_v1.0 [Gossypium arboreum] (6)
\------------------------100------------------------+
\------- Gh_A10G1979 [Gossypium hirsutum] (171)
|
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