![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM3878
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 111:
/----- XP_013600748.1 [Brassica oleracea] (3)
/-100+
| \----- GSBRNA2T00081201001 [Brassica napus] (29)
/-89-+
| \---------- GSBRNA2T00083992001 [Brassica napus] (4)
/-100-+
| \--------------- XP_009110746.1 [Brassica rapa] (35)
/-100+
| | /----- RrC1954_p4 [Raphanus raphanistrum] (13)
| \------100------+
/-100+ \----- Rsa1.0_02179.1_g00003.1 [Raphanus sativus] (41)
| |
/-67-+ \-------------------------- Tp1g22000 [Thellungiella parvula] (38)
| |
/-100+ \------------------------------- 676715384 [Sisymbrium irio] (14)
| |
/-100+ \------------------------------------ Thhalv10008235m [Eutrema salsugineum] (47)
| |
/----100---+ \----------------------------------------- Araha.9126s0003.1.p [Arabidopsis halleri] (19)
| |
| \---------------------------------------------- AA39G00621 [Aethionema arabicum] (23)
|
| /----- Gorai.005G141900.1 [Gossypium raimondii] (5)
| /-93-+
| | \----- Gh_D02G1265 [Gossypium hirsutum] (24)
| /-100+
| | \---------- Gh_A03G0881 [Gossypium hirsutum] (43)
| /--53-+
| | \--------------- Thecc1EG011693t1 [Theobroma cacao] (48)
| /-99-+
| | | /----- Gh_A04G1278 [Gossypium hirsutum] (39)
| | \------100------+
| | \----- Gorai.012G187000.1 [Gossypium raimondii] (42)
| /-99-+
| | | /----- Gh_A13G0668 [Gossypium hirsutum] (21)
| | | /-100+
/-99-+ | | | \----- Cotton_A_27662_BGI-A2_v1.0 [Gossypium arboreum] (46)
| | | \------100------+
| | /-80-+ | /----- Gh_D13G0783 [Gossypium hirsutum] (26)
| | | | \-100+
| | | | \----- Gorai.013G086300.1 [Gossypium raimondii] (49)
| | | |
| | | \------------------------------- evm.model.supercontig_128.40 [Carica papaya] (58)
| | /-99-+
| | | | /----- Neem_33703_f_1 [Azadirachta indica] (10)
| | | | /-100+
| | | | | \----- Neem_3637_f_1 [Azadirachta indica] (11)
| | | \-----------100-----------+
| | /-99-+ | /----- orange1.1g017978m [Citrus sinensis] (22)
| | | | \-100+
| | | | \----- Ciclev10031937m [Citrus clementina] (34)
| | /--99-+ |
--99-+ | | | \----------------------------------------- Eucgr.G02494.1.p [Eucalyptus grandis] (20)
| | | |
| \-99-+ \---------------------------------------------- Eucgr.A02082.1.p [Eucalyptus grandis] (18)
| |
| | /----- XP_010551440.1 [Tarenaya hassleriana] (9)
| \----------------------99----------------------+
| \----- XP_010552572.1 [Tarenaya hassleriana] (30)
|
| /----- Araha.3134s0024.1.p [Arabidopsis halleri] (15)
| /-100+
| | \----- 476093 [Arabidopsis lyrata] (51)
| /------100------+
| | \---------- AT1G69580.2 [Arabidopsis thaliana] (36)
| |
| | /----- Carubv10020610m [Capsella rubella] (16)
| | /---100---+
\----------------100----------------+ | \----- Cagra.0820s0002.1.p [Capsella grandiflora] (25)
| |
| /-100-+ /---------- Csa16g031010.1 [Camelina sativa] (17)
| | | |
| | \-100+ /----- Csa05g086310.1 [Camelina sativa] (53)
\-99-+ \-99-+
| \----- Csa07g036320.1 [Camelina sativa] (59)
|
\--------------------- Bostr.10273s0407.1.p [Boechera stricta] (33)
Root part of tree:
/------------------------------------------------------------------- Tp5g24700 [Thellungiella parvula] (1)
|
| /---------- GSBRNA2T00124297001 [Brassica napus] (28)
| /---100--+
| | \---------- XP_009104994.1 [Brassica rapa] (37)
|----------------------100----------------------+
| | /---------- GSBRNA2T00118049001 [Brassica napus] (40)
| \---100--+
| \---------- XP_013590772.1 [Brassica oleracea] (54)
|
| /---------- XP_009127744.1 [Brassica rapa] (2)
| /---100--+
| | \---------- GSBRNA2T00079501001 [Brassica napus] (57)
| /---100---+
| | | /---------- GSBRNA2T00040515001 [Brassica napus] (7)
| | \---97---+
| /--------100-------+ \---------- XP_013618407.1 [Brassica oleracea] (27)
+ | |
| | | /---------- RrC7600_p1 [Raphanus raphanistrum] (31)
| | \--------100-------+
| | \---------- Rsa1.0_00845.1_g00006.1 [Raphanus sativus] (52)
| |
| | /---------- XP_009105512.1 [Brassica rapa] (6)
| | /---100--+
| | | \---------- GSBRNA2T00101926001 [Brassica napus] (44)
| | /---100---+
| /---58---+ | | /---------- XP_013589904.1 [Brassica oleracea] (50)
| | | | \---100--+
| | | /---100--+ \---------- GSBRNA2T00112894001 [Brassica napus] (55)
| | | | |
| | | | | /---------- Rsa1.0_03454.1_g00008.1 [Raphanus sativus] (8)
| | |----99---+ \--------100-------+
| | | | \---------- RrC2221_p4 [Raphanus raphanistrum] (12)
\----61---+ | |
| | \-------------------------------------- 676720864 [Sisymbrium irio] (56)
| |
| \------------------------------------------------ Thhalv10018902m [Eutrema salsugineum] (32)
|
| /---------- (111)
\----------------------99----------------------+
\---------- KFK41382.1 [Arabis alpina] (45)
|




