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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3915
| Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 80:
/----- GSBRNA2T00063089001 [Brassica napus] (3)
/-91-+
| \----- XP_009149892.1 [Brassica rapa] (14)
/-100+
| | /----- GSBRNA2T00024785001 [Brassica napus] (15)
| \-99-+
/----100---+ \----- XP_013630119.1 [Brassica oleracea] (38)
| |
| | /----- Rsa1.0_04358.1_g00002.1 [Raphanus sativus] (26)
| \---100---+
| \----- RrC4255_p1 [Raphanus raphanistrum] (27)
|
| /----- Carubv10017043m [Capsella rubella] (11)
| /-100+
/-59-+ | \----- Cagra.1659s0005.1.p [Capsella grandiflora] (45)
| | /-99-+
| | | \---------- Bostr.18473s0195.1.p [Boechera stricta] (53)
| | |
| | /--99-+ /----- Csa06g021260.1 [Camelina sativa] (19)
| | | | /-100+
| | | | | \----- Csa04g030560.1 [Camelina sativa] (50)
/-56-+ | | \-100+
| | \-99-+ \---------- Csa09g048010.1 [Camelina sativa] (42)
| | |
| | | /----- 485126 [Arabidopsis lyrata] (28)
| | \------100------+
/-59-+ | \----- AT3G47620.1 [Arabidopsis thaliana] (43)
| | |
| | \------------------------------- 676760292 [Sisymbrium irio] (22)
/-57-+ |
| | \------------------------------------ Tp5g14290 [Thellungiella parvula] (18)
| |
/--68-+ \----------------------------------------- Thhalv10011054m [Eutrema salsugineum] (12)
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/-97-+ \---------------------------------------------- KFK34066.1 [Arabis alpina] (6)
| |
| \---------------------------------------------------- AA96G00032 [Aethionema arabicum] (4)
/-100+
| | /----- XP_010548838.1 [Tarenaya hassleriana] (24)
| \------------------------100------------------------+
--90-+ \----- XP_010550606.1 [Tarenaya hassleriana] (47)
|
\-------------------------------------------------------------- evm.model.supercontig_1815.2 [Carica papaya] (37)
Subtree rooted at node 105:
/----- Cotton_A_06142_BGI-A2_v1.0 [Gossypium arboreum] (2)
/-99-+
| \----- Gh_A12G1522 [Gossypium hirsutum] (13)
/----------------------100---------------------+
| | /----- Gh_D12G1644 [Gossypium hirsutum] (20)
| \-100+
| \----- Gorai.008G181600.1 [Gossypium raimondii] (57)
|
| /------------------------------- (80)
| |
| | /--------------- Thecc1EG013943t1 [Theobroma cacao] (5)
| | |
| | | /----- Gorai.001G072200.1 [Gossypium raimondii] (8)
| | | /-100+
| | | | \----- Gh_D07G0639 [Gossypium hirsutum] (21)
| | |-100+
| | | | /----- Gh_A07G0574 [Gossypium hirsutum] (29)
| | /-100-+ \-100+
| | | | \----- Cotton_A_02703_BGI-A2_v1.0 [Gossypium arboreum] (39)
| /-68-+ | |
| | | | | /----- Gh_A12G1603 [Gossypium hirsutum] (23)
| | | | | /-100+
| | | | | | \----- Cotton_A_27685_BGI-A2_v1.0 [Gossypium arboreum] (46)
| | | | \-100+
| | | /-66-+ | /----- Gh_D12G1742 [Gossypium hirsutum] (25)
| | | | | \-100+
/-100+ | | | | \----- Gorai.008G192400.1 [Gossypium raimondii] (30)
| | | | | |
| | | | | | /----- orange1.1g014326m [Citrus sinensis] (10)
| | | | | | /-100+
| | | \-64-+ | | \----- Ciclev10020275m [Citrus clementina] (48)
| | /-100+ | \----100---+
| | | | | \---------- Neem_6786_f_2 [Azadirachta indica] (36)
| | | | |
| | | | | /---------- Cotton_A_09220_BGI-A2_v1.0 [Gossypium arboreum] (7)
| | | | | |
| | | | \------100------+ /----- Gorai.007G036800.1 [Gossypium raimondii] (16)
| | | | | |
| | | | \-95-+----- Gh_D11G0333 [Gossypium hirsutum] (55)
| | /-96-+ | |
| | | | | \----- Gh_A11G0279 [Gossypium hirsutum] (56)
| | | | |
--85-+ | | | | /----- Eucgr.B00471.1.p [Eucalyptus grandis] (9)
| | | | \--------------100-------------+
| | | | \----- EcS597400.10 [Eucalyptus camaldulensis] (54)
| | /-100-+ |
| | | | | /----- orange1.1g016130m [Citrus sinensis] (40)
| | | | \----------------100----------------+
| | | | \----- Ciclev10031757m [Citrus clementina] (44)
| \-100+ |
| | \---------------------------------------------- evm.model.supercontig_128.6 [Carica papaya] (35)
| |
| \---------------------------------------------------- Thecc1EG011752t1 [Theobroma cacao] (52)
|
| /----- Cotton_A_33342_BGI-A2_v1.0 [Gossypium arboreum] (17)
| /-100+
| | \----- Gh_A13G0648 [Gossypium hirsutum] (41)
\-------------------------99------------------------+
| /----- Gh_A13G0647 [Gossypium hirsutum] (34)
\-85-+
\----- Cotton_A_33341_BGI-A2_v1.0 [Gossypium arboreum] (49)
Root part of tree:
/------------------------------------------------------------------- Gorai.013G084500.1 [Gossypium raimondii] (1)
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|------------------------------------------------------------------- Gorai.N023500.1 [Gossypium raimondii] (31)
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+------------------------------------------------------------------- Gh_D13G2529 [Gossypium hirsutum] (32)
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| /--------------------------------- (105)
| |
\---------------100---------------+--------------------------------- Gh_D13G2530 [Gossypium hirsutum] (33)
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\--------------------------------- Gorai.N023400.1 [Gossypium raimondii] (51)
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