![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM4000
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 101:
/-------------------------------------------------------------- KFK44385.1 [Arabis alpina] (2)
|
| /------------------------------------ 676770562 [Sisymbrium irio] (3)
| |
| | /---------- Gorai.009G355700.1 [Gossypium raimondii] (6)
| | |
| | | /----- Gh_A04G1375 [Gossypium hirsutum] (12)
| | |-84-+
| | /-54-+ \----- Cotton_A_29346_BGI-A2_v1.0 [Gossypium arboreum] (59)
| | | |
| | | |---------- Gh_D05G3205 [Gossypium hirsutum] (35)
| | /-100-+ |
| | | | \---------- Gh_Sca064124G01 [Gossypium hirsutum] (41)
| | | |
| | /-100+ \--------------- Thecc1EG032408t1 [Theobroma cacao] (49)
| | | |
| | | \--------------------- Neem_1691_f_1 [Azadirachta indica] (16)
| | /-63-+
| | | | /----- Rsa1.0_01575.1_g00007.1 [Raphanus sativus] (29)
| | | \---------64---------+
| | | \----- RrC12757_p3 [Raphanus raphanistrum] (30)
| |-65-+
| | | /----- GSBRNA2T00052078001 [Brassica napus] (23)
| | | /-100+
| | | | \----- XP_009127848.1 [Brassica rapa] (54)
| | \---------98---------+
| | | /----- GSBRNA2T00031091001 [Brassica napus] (34)
| | \-99-+
| | \----- XP_013618155.1 [Brassica oleracea] (56)
| |
| | /----- Cagra.0147s0032.1.p [Capsella grandiflora] (7)
| | /---100---+
| /-55-+ | \----- Carubv10021118m [Capsella rubella] (57)
| | | |
| | | /--95-+ /---------- Bostr.10273s0232.1.p [Boechera stricta] (10)
| | | | | |
| | | | \-84-+ /----- Csa16g032820.1 [Camelina sativa] (32)
| | | | | |
| | | | \-100+----- Csa09g072460.1 [Camelina sativa] (48)
| | | /-95-+ |
| | | | | \----- Csa07g038040.1 [Camelina sativa] (58)
| | | | |
| | | | | /---------- AT1G71130.1 [Arabidopsis thaliana] (24)
| | | | | |
--90-+ | |----71---+ \----100---+ /----- 476245 [Arabidopsis lyrata] (33)
| | | | \-100+
| | | | \----- Araha.4747s0009.1.p [Arabidopsis halleri] (52)
| | | |
| /-63-+ | \-------------------------- Thhalv10019247m [Eutrema salsugineum] (36)
| | | |
| | | | /----- GSBRNA2T00092596001 [Brassica napus] (18)
| | | | /-92-+
| | | | | \----- XP_013590335.1 [Brassica oleracea] (50)
| | | | /-99-+
| | | | | | /----- XP_009104928.1 [Brassica rapa] (25)
| | | | | \-100+
| | | |---------81---------+ \----- GSBRNA2T00099623001 [Brassica napus] (27)
| /--61-+ | | |
| | | | | | /----- Rsa1.0_04164.1_g00003.1 [Raphanus sativus] (40)
| | | | | \---100---+
| | | | | \----- RrC6123_p1 [Raphanus raphanistrum] (43)
| | | | |
| | | | \------------------------------------ KFK41539.1 [Arabis alpina] (37)
| /-69-+ | |
| | | | \----------------------------------------- Tp5g26300 [Thellungiella parvula] (44)
| | | |
| | | \---------------------------------------------- AA31G00055 [Aethionema arabicum] (20)
| | |
|-69-+ | /----- XP_010557856.1 [Tarenaya hassleriana] (4)
| | \----------------------100---------------------+
| | \----- XP_010547342.1 [Tarenaya hassleriana] (14)
| |
| \--------------------------------------------------------- AA39G00494 [Aethionema arabicum] (22)
|
| /---------- XP_013596384.1 [Brassica oleracea] (8)
| |
| | /----- GSBRNA2T00007782001 [Brassica napus] (11)
| /-100+-100+
| | | \----- XP_009103209.1 [Brassica rapa] (53)
| | |
| | \---------- GSBRNA2T00061818001 [Brassica napus] (21)
| |
| /--53-+--------------- Thhalv10008928m [Eutrema salsugineum] (19)
| | |
| | |--------------- 676730070 [Sisymbrium irio] (46)
| | |
| | \--------------- Tp1g20440 [Thellungiella parvula] (51)
\-------------------66-------------------+
| /----- Rsa1.0_00596.1_g00016.1 [Raphanus sativus] (9)
| /---100---+
| | \----- RrC16317_p1 [Raphanus raphanistrum] (38)
| |
\-100-+ /----- GSBRNA2T00153173001 [Brassica napus] (13)
| /-100+
| | \----- XP_013602704.1 [Brassica oleracea] (42)
\-97-+
| /----- GSBRNA2T00073071001 [Brassica napus] (17)
\-82-+
\----- XP_009110125.1 [Brassica rapa] (45)
Root part of tree:
/------------------------------------------------------------------- Bostr.12659s0155.1.p [Boechera stricta] (1)
|
| /----------------- Cagra.0114s0006.1.p [Capsella grandiflora] (15)
| /---------------100--------------+
| | \----------------- Carubv10010423m [Capsella rubella] (31)
| |
|-------100------+ /--------------------------------- Csa14g029210.1 [Camelina sativa] (26)
| | |
+ \-------100------+ /----------------- Csa17g030040.1 [Camelina sativa] (28)
| \-------99------+
| \----------------- Csa03g026820.1 [Camelina sativa] (55)
|
| /-------------------------------------------------- (101)
| |
| | /----------------- Araha.5836s0002.1.p [Arabidopsis halleri] (5)
\-------99-------+ /------100------+
| | \----------------- 472549 [Arabidopsis lyrata] (47)
\-------100------+
\--------------------------------- AT1G22985.1 [Arabidopsis thaliana] (39)
|




