![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM4003
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 103:
/----- Araha.12162s0001.1.p [Arabidopsis halleri] (2)
/---------100--------+
| \----- AT2G35430.1 [Arabidopsis thaliana] (30)
|
| /---------- Csa05g018850.1 [Camelina sativa] (4)
| |
| /-100+ /----- Csa04g047740.1 [Camelina sativa] (7)
/-84-+ | \-91-+
| | | \----- Csa06g037920.1 [Camelina sativa] (42)
| | /--99-+
| | | | /----- Cagra.0993s0051.1.p [Capsella grandiflora] (43)
| | | \---100---+
/----98---+ \-65-+ \----- Carubv10023877m [Capsella rubella] (48)
| | |
| | \--------------------- Bostr.23794s0560.1.p [Boechera stricta] (9)
| |
| \------------------------------- 321255 [Arabidopsis lyrata] (8)
|
| /----- XP_009143672.1 [Brassica rapa] (3)
| /----99---+
| | \----- GSBRNA2T00050301001 [Brassica napus] (27)
| |
/-100+ /-100-+ /----- XP_013634611.1 [Brassica oleracea] (22)
| | | | /-99-+
| | | | | \----- GSBRNA2T00141258001 [Brassica napus] (51)
| | /-91-+ \-99-+
| | | | \---------- XP_013637293.1 [Brassica oleracea] (41)
| | | |
| | /-91-+ \--------------------- Rsa1.0_57434.1_g00001.1 [Raphanus sativus] (34)
/-100-+ | | |
| | | /-76-+ \-------------------------- Tp4g17650 [Thellungiella parvula] (32)
| | | | |
| | \-78-+ \------------------------------- Thhalv10016994m [Eutrema salsugineum] (28)
| | |
| | \------------------------------------ KFK36449.1 [Arabis alpina] (54)
| |
| \---------------------------------------------- AA9G00131 [Aethionema arabicum] (57)
|
| /---------------------------------------------- XP_010538382.1 [Tarenaya hassleriana] (10)
| |
/-100+ | /----- Gh_D12G2067 [Gossypium hirsutum] (11)
| | | /-100+
| | | | \----- Gorai.008G225600.1 [Gossypium raimondii] (52)
| | | /----100---+
| | | | \---------- Cotton_A_07916_BGI-A2_v1.0 [Gossypium arboreum] (13)
| | | |
| | | | /----- Cotton_A_09177_BGI-A2_v1.0 [Gossypium arboreum] (33)
| | | /-100+ /-100+
| | | | | | \----- Gh_A11G2993 [Gossypium hirsutum] (39)
| | | | | /-97-+
| | | | | | \---------- Gh_D11G0298 [Gossypium hirsutum] (55)
| \-100-+ /-100+ \-100-+
| | | | \--------------- Gorai.007G032800.1 [Gossypium raimondii] (37)
| | | |
/-82-+ | | \-------------------------- Thecc1EG015690t1 [Theobroma cacao] (20)
| | | /-54-+
| | | | | /----- Neem_33159_a_1 [Azadirachta indica] (18)
| | | | | /-100+
| | | | | | \----- Neem_11233_f_1 [Azadirachta indica] (25)
| | | | \---------100--------+
| | | /-100+ | /----- orange1.1g018874m [Citrus sinensis] (45)
| | | | | \-100+
| | | | | \----- Ciclev10015789m [Citrus clementina] (58)
| | \-100+ |
| | | \------------------------------------ Eucgr.E00271.1.p [Eucalyptus grandis] (29)
| | |
| | \----------------------------------------- evm.model.supercontig_90.64 [Carica papaya] (46)
| |
| \--------------------------------------------------------- AA53G00221 [Aethionema arabicum] (15)
|
| /----- Rsa1.0_00225.1_g00014.1 [Raphanus sativus] (5)
| /-94-+
| | \----- RrC17465_p1 [Raphanus raphanistrum] (17)
| /-100+
| | \---------- RrC26123_p1 [Raphanus raphanistrum] (26)
--100+ |
| | /----- GSBRNA2T00111467001 [Brassica napus] (16)
| /--76-+---100---+
| | | \----- XP_013587622.1 [Brassica oleracea] (23)
| | |
| | | /----- GSBRNA2T00156629001 [Brassica napus] (40)
|-------------------67-------------------+ \---100---+
| | \----- XP_009114893.1 [Brassica rapa] (50)
| |
| \--------------------- KFK45012.1 [Arabis alpina] (31)
|
| /----- Tp1g28530 [Thellungiella parvula] (21)
|---------------------------89---------------------------+
| \----- Thhalv10007908m [Eutrema salsugineum] (56)
|
| /----- GSBRNA2T00010327001 [Brassica napus] (24)
| /-100+
| | \----- XP_009151425.1 [Brassica rapa] (35)
| /-97-+
| | | /----- RrC18696_p1 [Raphanus raphanistrum] (36)
| | \-100+
\----------------------68----------------------+ \----- Rsa1.0_02028.1_g00005.1 [Raphanus sativus] (47)
|
\--------------- 676768784 [Sisymbrium irio] (49)
Root part of tree:
/------------------------------------------------------------------- Cagra.3957s0020.1.p [Capsella grandiflora] (1)
|
|------------------------------------------------------------------- Carubv10009393m [Capsella rubella] (6)
|
| /---------------------------------------- (103)
+ |
| /------97-----+ /--------------------------- Bostr.3359s0123.1.p [Boechera stricta] (12)
| | | |
| | \-----84-----+ /------------- AT1G32360.1 [Arabidopsis thaliana] (14)
| | \-----100-----+
\-----100----+ \------------- 890808 [Arabidopsis lyrata] (53)
|
| /------------- Csa03g036710.1 [Camelina sativa] (19)
| |
\-------------------100------------------+------------- Csa17g051710.1 [Camelina sativa] (38)
|
\------------- Csa14g042310.1 [Camelina sativa] (44)
|




