![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM4042
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 92:
/----------------------------------------- KFK36932.1 [Arabis alpina] (5)
|
| /----- XP_009141921.1 [Brassica rapa] (9)
| /-83-+
| | \----- GSBRNA2T00155098001 [Brassica napus] (40)
| /-87-+
| | \---------- XP_013634112.1 [Brassica oleracea] (29)
| /-100-+
| | \--------------- GSBRNA2T00123280001 [Brassica napus] (38)
| /-100+
| | | /----- Rsa1.0_02285.1_g00005.1 [Raphanus sativus] (22)
| | \-------89------+
| | \----- RrC24660_p1 [Raphanus raphanistrum] (50)
/-85-+ |
| | | /----- XP_009142704.1 [Brassica rapa] (12)
| | /-100+ /-100+
| | | | | \----- GSBRNA2T00132841001 [Brassica napus] (28)
| | | | /-100+
| | | | | | /----- GSBRNA2T00024327001 [Brassica napus] (16)
| | | | | \-100+
| | | \----100---+ \----- XP_013636912.1 [Brassica oleracea] (42)
| | /-87-+ |
| | | | | /----- RrC3512_p2 [Raphanus raphanistrum] (30)
| | | | \---100---+
| | | | \----- Rsa1.0_00222.1_g00012.1 [Raphanus sativus] (53)
| \-53-+ |
| | \------------------------------- 676735674 [Sisymbrium irio] (46)
/-100-+ |
| | | /----- Thhalv10016819m [Eutrema salsugineum] (27)
| | \--------------70--------------+
| | \----- Tp4g22950 [Thellungiella parvula] (55)
| |
| | /----- Araha.8490s0007.1.p [Arabidopsis halleri] (7)
| | /-99-+
| | | \----- 483119 [Arabidopsis lyrata] (20)
| | /----82----+
| | | \---------- AT2G40620.1 [Arabidopsis thaliana] (57)
| | |
| | | /----- Csa05g012080.1 [Camelina sativa] (19)
/-100+ | | /-91-+
| | \-----------100----------+ | \----- Csa04g054990.1 [Camelina sativa] (39)
| | | /-100+
| | | | \---------- Csa06g045050.1 [Camelina sativa] (52)
| | | |
| | \-100-+ /---------- Bostr.9345s0072.1.p [Boechera stricta] (35)
| | | |
| | \-56-+ /----- Carubv10025182m [Capsella rubella] (36)
/-100+ | \-100+
| | | \----- Cagra.1642s0027.1.p [Capsella grandiflora] (49)
| | |
| | \---------------------------------------------------- AA93G00066 [Aethionema arabicum] (33)
| |
| | /----- XP_010554713.1 [Tarenaya hassleriana] (17)
| | /-84-+
| | | \----- XP_010539313.1 [Tarenaya hassleriana] (45)
--97-+ \----------------------86----------------------+
| \---------- XP_010525409.1 [Tarenaya hassleriana] (37)
|
| /----- Neem_8966_f_1 [Azadirachta indica] (8)
| /-100+
| | \----- Neem_42098_f_1 [Azadirachta indica] (41)
| /-98-+
| | \---------- Thecc1EG042286t1 [Theobroma cacao] (21)
\----------------------100---------------------+
\--------------- evm.model.supercontig_2.298 [Carica papaya] (18)
Root part of tree:
/------------------------------------------------------------------- Gh_D06G1934 [Gossypium hirsutum] (1)
|
| /------- Gh_A06G1580 [Gossypium hirsutum] (10)
|----------------------------100----------------------------+
| \------- Cotton_A_15600_BGI-A2_v1.0 [Gossypium arboreum] (44)
|
| /------------------------------------------------------------ Gorai.010G218700.1 [Gossypium raimondii] (2)
| |
| | /------- Gh_A10G1607 [Gossypium hirsutum] (3)
| | /--100--+
| | | \------- Cotton_A_23834_BGI-A2_v1.0 [Gossypium arboreum] (26)
+ | /--59--+
| | | \--------------- Gh_D10G1862 [Gossypium hirsutum] (25)
| | /------100-----+
| | | \---------------------- Gorai.011G209200.2 [Gossypium raimondii] (43)
| | |
| | | /------- (92)
| | | /---70--+
| | | | \------- evm.model.supercontig_19.62 [Carica papaya] (34)
| | | /--76--+
| | | | | /------- Eucgr.G03135.1.p [Eucalyptus grandis] (11)
| | /---72--+ | \--100--+
\--89--+ | | | \------- Eucgr.J00119.1.p [Eucalyptus grandis] (47)
| | | /--100--+
| | | | | /------- Ciclev10032076m [Citrus clementina] (13)
| | | | | /--100--+
| | | | | | \------- orange1.1g020026m [Citrus sinensis] (54)
| | | | \--100-+
| | | | | /------- Neem_25179_f_1 [Azadirachta indica] (14)
| | \--96--+ \--100--+
| | | \------- Neem_1400_f_2 [Azadirachta indica] (23)
| /--99--+ |
| | | | /------- Gh_A05G3769 [Gossypium hirsutum] (6)
| | | | /---95--+
| | | | | \------- Cotton_A_06019_BGI-A2_v1.0 [Gossypium arboreum] (24)
| | | \------100-----+
| | | | /------- Gorai.012G014500.1 [Gossypium raimondii] (15)
| | | \---89--+
\--100--+ | \------- Gh_D04G1925 [Gossypium hirsutum] (31)
| |
| \--------------------------------------------- Thecc1EG045524t1 [Theobroma cacao] (4)
|
| /------- Cotton_A_04055_BGI-A2_v1.0 [Gossypium arboreum] (32)
| /--100--+
| | \------- Gh_A05G2386 [Gossypium hirsutum] (51)
\-----------------100----------------+
| /------- Gorai.009G293600.1 [Gossypium raimondii] (48)
\--100--+
\------- Gh_D05G2651 [Gossypium hirsutum] (56)
|




