![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM4090
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 105:
/----- GSBRNA2T00100330001 [Brassica napus] (2)
/-100+
| \----- XP_013598019.1 [Brassica oleracea] (42)
/-100+
| | /----- GSBRNA2T00018898001 [Brassica napus] (20)
| \-99-+
/-100-+ \----- XP_009101921.1 [Brassica rapa] (57)
| |
| | /----- RrC11488_p1 [Raphanus raphanistrum] (7)
| \----99---+
| \----- Rsa1.0_00211.1_g00039.1 [Raphanus sativus] (16)
|
/-95-+ /----- XP_013589721.1 [Brassica oleracea] (9)
| | /-100+
| | | \----- GSBRNA2T00075096001 [Brassica napus] (44)
| | /-100+
| | | | /----- XP_009137623.1 [Brassica rapa] (49)
| | | \-97-+
/-88-+ \-100-+ \----- GSBRNA2T00073938001 [Brassica napus] (52)
| | |
| | | /----- Rsa1.0_00019.1_g00015.1 [Raphanus sativus] (23)
| | \---100---+
/-67-+ | \----- RrC3454_p3 [Raphanus raphanistrum] (43)
| | |
| | \-------------------------- 676743844 [Sisymbrium irio] (38)
| |
| \------------------------------- Tp7g36930 [Thellungiella parvula] (28)
|
| /----- GSBRNA2T00061087001 [Brassica napus] (3)
| /-100+
| | \----- XP_013624761.1 [Brassica oleracea] (13)
| /-100+
| | | /----- GSBRNA2T00150878001 [Brassica napus] (14)
| | \-100+
|---------100--------+ \----- XP_009109516.1 [Brassica rapa] (29)
/-100+ |
| | | /----- Rsa1.0_00944.1_g00011.1 [Raphanus sativus] (15)
| | \---100---+
| | \----- RrC5291_p2 [Raphanus raphanistrum] (35)
| |
| |------------------------------------ Thhalv10025867m [Eutrema salsugineum] (8)
| |
| | /----- 327841 [Arabidopsis lyrata] (10)
| | /-100+
/-100+ | | \----- Araha.16804s0008.1.p [Arabidopsis halleri] (32)
| | | /-100+
| | | | \---------- AT4G38910.2 [Arabidopsis thaliana] (33)
| | \---------71---------+
| | | /----- Csa10g001630.1 [Camelina sativa] (11)
| | \----69---+
| | \----- Bostr.25542s0071.1.p [Boechera stricta] (34)
| |
| \----------------------------------------- AA20G00052 [Aethionema arabicum] (37)
|
| /----- Tp4g00440 [Thellungiella parvula] (4)
| /------100------+
| | \----- 676748222 [Sisymbrium irio] (59)
| |
| | /----- GSBRNA2T00090266001 [Brassica napus] (17)
| | /-100+
| /-95-+ | \----- XP_009140266.1 [Brassica rapa] (39)
| | | /-100+
| | | | | /----- XP_013633652.1 [Brassica oleracea] (47)
/--99-+ | | | \-100+
| | | \-100-+ \----- GSBRNA2T00097679001 [Brassica napus] (48)
| | /-95-+ |
| | | | | /----- Rsa1.0_00427.1_g00009.1 [Raphanus sativus] (24)
| | | | \---100---+
| | | | \----- RrC15218_p1 [Raphanus raphanistrum] (41)
| | | |
| | | \-------------------------- Thhalv10000273m [Eutrema salsugineum] (19)
| | |
| | | /--------------------- Bostr.5022s0111.1.p [Boechera stricta] (18)
| | /-100+ |
| | | | | /----- Cagra.2961s0028.1.p [Capsella grandiflora] (25)
| | | | /-99-+ /----99---+
| | | | | | | \----- Carubv10023579m [Capsella rubella] (51)
| | | | | | |
/-72-+ | | | | \-100-+ /----- Csa07g051440.1 [Camelina sativa] (27)
| | | | | | | /-81-+
| | | | | | | | \----- Csa09g085630.1 [Camelina sativa] (58)
| | | | \-100+ \-100+
| | \---100---+ | \---------- Csa16g043040.1 [Camelina sativa] (40)
| | | |
| | | | /---------- AT2G21240.1 [Arabidopsis thaliana] (22)
| | | | |
| | | \-------59------+ /----- Araha.38650s0006.1.p [Arabidopsis halleri] (30)
/-100+ | | \-100+
| | | | \----- 480982 [Arabidopsis lyrata] (55)
| | | |
| | | \------------------------------------ AA46G00052 [Aethionema arabicum] (45)
| | |
| | | /----- XP_010531487.1 [Tarenaya hassleriana] (46)
--70-+ | \----------------------70----------------------+
| | \----- XP_010526572.1 [Tarenaya hassleriana] (50)
| |
| \--------------------------------------------------------- XP_010555253.1 [Tarenaya hassleriana] (12)
|
\-------------------------------------------------------------- Eucgr.I01334.1.p [Eucalyptus grandis] (31)
Root part of tree:
/------------------------------------------------------------------- Gh_D13G2510 [Gossypium hirsutum] (1)
|
|------------------------------------------------------------------- Gorai.001G243700.1 [Gossypium raimondii] (5)
|
| /----------- (105)
| /----------99---------+
| | \----------- evm.model.supercontig_150.9 [Carica papaya] (54)
+ |
| /----100----+ /----------- orange1.1g021524m [Citrus sinensis] (6)
| | | /----100---+
| | | | \----------- Ciclev10028882m [Citrus clementina] (21)
| /----100---+ \----100---+
| | | \---------------------- Neem_1417_f_1 [Azadirachta indica] (26)
| | |
\----100---+ \--------------------------------------------- Thecc1EG006767t1 [Theobroma cacao] (53)
|
| /----------- Cotton_A_32368_BGI-A2_v1.0 [Gossypium arboreum] (36)
\---------------------100--------------------+
\----------- Gh_A13G2205 [Gossypium hirsutum] (56)
|




