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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGEM444
| Phylogenetic tree for protein ? help Back to Top |
|---|
Subtree rooted at node 278:
/---------------------------------------------- KFK29818.1 [Arabis alpina] (2)
|
| /----- Cagra.12385s0010.1.p [Capsella grandiflora] (3)
| /---100---+
| | \----- Carubv10005036m [Capsella rubella] (151)
| |
| /-87-+ /----- Csa10g010440.1 [Camelina sativa] (15)
| | | /-100+
| | | | \----- Csa12g013980.1 [Camelina sativa] (111)
| /-100+ \-100+
| | | \---------- Csa11g011250.1 [Camelina sativa] (180)
/-100+ | |
| | | \-------------------- Bostr.7867s1058.1.p [Boechera stricta] (9)
| | /------100------+
| | | | /---------- AT4G32040.1 [Arabidopsis thaliana] (19)
| | | | |
| | | \------100-----+ /----- 328525 [Arabidopsis lyrata] (82)
| | | \-100+
| | | \----- Araha.8819s0008.1.p [Arabidopsis halleri] (136)
| | |
| | | /------------------------------------ Thhalv10025443m [Eutrema salsugineum] (4)
| \-65-+ |
| | | /----- Rsa1.0_00092.1_g00029.1 [Raphanus sativus] (6)
| | | /---100---+
| | | | \----- RrC320_p1 [Raphanus raphanistrum] (122)
| | | |
| | | /-100+ /----- XP_013593437.1 [Brassica oleracea] (62)
| | | | | /-100+
| | | | | | \----- GSBRNA2T00099835001 [Brassica napus] (157)
| \-66-+ | \-100+
| | /----66---+ | /----- XP_009138064.1 [Brassica rapa] (73)
/-82-+ | | | \-98-+
| | | | | \----- GSBRNA2T00077773001 [Brassica napus] (138)
| | | | |
| | | | \-------------------- Tp7g29840 [Thellungiella parvula] (41)
| | | |
| | | | /----- GSBRNA2T00121065001 [Brassica napus] (24)
| | | | /-64-+
| | \--66-+ | \----- XP_013596917.1 [Brassica oleracea] (64)
| | | /-64-+
| | | | \---------- XP_009126429.1 [Brassica rapa] (100)
| | | /-100+
| | | | \--------------- GSBRNA2T00130531001 [Brassica napus] (113)
| | | /-100+
| | | | | /----- Rsa1.0_03209.1_g00002.1 [Raphanus sativus] (52)
| | | | \------100-----+
| | \-100+ \----- RrC1082_p4 [Raphanus raphanistrum] (132)
| | |
| | \------------------------- 676740634 [Sisymbrium irio] (150)
| |
| \--------------------------------------------------- XP_010525937.1 [Tarenaya hassleriana] (63)
|
| /---------- Csa13g013840.1 [Camelina sativa] (5)
| |
| /-78-+ /----- Csa08g002210.1 [Camelina sativa] (77)
| | \-100+
| /-73-+ \----- Csa20g016470.1 [Camelina sativa] (118)
| | |
| /-70-+ \--------------- Cagra.1398s0046.1.p [Capsella grandiflora] (127)
| | |
| /-73-+ \-------------------- Carubv10001144m [Capsella rubella] (131)
| | |
| | \------------------------- Bostr.23997s0006.1.p [Boechera stricta] (51)
| /--73-+
| | | /---------- AT5G11060.1 [Arabidopsis thaliana] (10)
| | | |
| | \--------100--------+ /----- Araha.4931s0007.1.p [Arabidopsis halleri] (13)
| | \-91-+
| | \----- 487938 [Arabidopsis lyrata] (116)
| |
| | /----- RrC5582_p1 [Raphanus raphanistrum] (44)
| | /-100+
| | | \----- Rsa1.0_02852.1_g00006.1 [Raphanus sativus] (121)
| | |
| | | /----- XP_009131190.1 [Brassica rapa] (60)
| | /---100---+-98-+
| | | | \----- GSBRNA2T00129789001 [Brassica napus] (85)
| | | |
| | | \---------- XP_013622359.1 [Brassica oleracea] (133)
| /-56-+ |
| | | | /----- XP_013614952.1 [Brassica oleracea] (55)
| | | /-88-+ /-100+
| | | | | | \----- GSBRNA2T00098275001 [Brassica napus] (61)
| | | | | |
| | | | | /-99-+---------- XP_009125259.1 [Brassica rapa] (87)
| | | | | | |
| | |----53----+ \-99-+ \---------- GSBRNA2T00143482001 [Brassica napus] (190)
| | | | |
|------55------+ | | \--------------- Rsa1.0_00082.1_g00023.1 [Raphanus sativus] (94)
| | | |
| | | \------------------------- Tp6g32440 [Thellungiella parvula] (81)
| | |
| | |------------------------------------ KFK25380.1 [Arabis alpina] (76)
| | |
| | \------------------------------------ Thhalv10013773m [Eutrema salsugineum] (115)
| |
| \----------------------------------------- AA44G00364 [Aethionema arabicum] (38)
|
| /----- Gh_D13G1956 [Gossypium hirsutum] (8)
| /-100+
| | \----- Gorai.013G213900.1 [Gossypium raimondii] (29)
| /-100+
| | | /----- Cotton_A_09092_BGI-A2_v1.0 [Gossypium arboreum] (96)
| | \-100+
| | \----- Gh_A13G1595 [Gossypium hirsutum] (146)
| /-99-+
| | | /---------- Gorai.001G035700.1 [Gossypium raimondii] (30)
| | | |
| | | | /----- Cotton_A_19190_BGI-A2_v1.0 [Gossypium arboreum] (36)
| | \-100+-61-+
| | | \----- Gh_A07G0245 [Gossypium hirsutum] (145)
| | |
| | \---------- Gh_D07G0302 [Gossypium hirsutum] (89)
| /-87-+
| | | /----- Gorai.009G060200.1 [Gossypium raimondii] (20)
| | | /-100+
| | | | \----- Gh_D05G3920 [Gossypium hirsutum] (23)
| | | /-100+
| | | | | /----- Cotton_A_01196_BGI-A2_v1.0 [Gossypium arboreum] (28)
| | | | \-100+
| | | | \----- Gh_A05G0463 [Gossypium hirsutum] (144)
| /-85-+ \-87-+
| | | | /----- Gh_D06G1066 [Gossypium hirsutum] (40)
| | | | /-100+
| | | | | \----- Gh_A06G0906 [Gossypium hirsutum] (160)
| | | \-100+
| | | \---------- Gorai.010G117100.1 [Gossypium raimondii] (126)
| /--83-+ |
/-100+ | | \------------------------- evm.model.supercontig_187.27 [Carica papaya] (54)
| | | |
| | | | /----- Ciclev10008269m [Citrus clementina] (11)
| | | | /-100+
| | | | | \----- orange1.1g013045m [Citrus sinensis] (170)
| | | \---------97--------+
| |---------64--------+ | /----- Neem_3363_f_7 [Azadirachta indica] (80)
| | | \-97-+
| | | \----- Neem_21514_f_1 [Azadirachta indica] (83)
| | |
| | | /----- Eucgr.C02727.1.p [Eucalyptus grandis] (88)
| | | /-51-+
| | | | \----- EcC042939.10 [Eucalyptus camaldulensis] (130)
| | \-----------100-----------+
| | \---------- EcC036825.20 [Eucalyptus camaldulensis] (150)
| |
| | /---------- Csa20g048500.1 [Camelina sativa] (12)
| | |
| | | /----- Csa08g022890.1 [Camelina sativa] (48)
| | |-83-+
| | /-55-+ \----- Csa13g031050.1 [Camelina sativa] (140)
| | | |
| | | | /----- Cagra.0628s0006.1.p [Capsella grandiflora] (95)
| | /-55-+ \-93-+
| | | | \----- Carubv10001020m [Capsella rubella] (110)
| | | |
| | | \--------------- Bostr.29827s0294.1.p [Boechera stricta] (99)
| | /-69-+
| | | | /----- 489374 [Arabidopsis lyrata] (39)
| | | | /-78-+
| | | | | \----- Araha.13863s0006.1.p [Arabidopsis halleri] (53)
| | | \----77---+
| | | \---------- AT5G25220.1 [Arabidopsis thaliana] (50)
| | |
| | | /----- XP_013598002.1 [Brassica oleracea] (14)
| | | /-100+
| | | | \----- GSBRNA2T00133586001 [Brassica napus] (31)
| | | |
| | | /-100+---------- XP_009151045.1 [Brassica rapa] (97)
| | | | |
| | | | \---------- GSBRNA2T00147620001 [Brassica napus] (152)
| | | /-100+
| | | | | /----- Rsa1.0_01035.1_g00007.1 [Raphanus sativus] (74)
| | | | \----97---+
| | | | \----- RrC276_p3 [Raphanus raphanistrum] (92)
| | | |
| | | | /----- XP_009129978.1 [Brassica rapa] (37)
| |--------------51--------------+-78-+ /-99-+
| | | | | \----- GSBRNA2T00120401001 [Brassica napus] (65)
| | | | /-100+
| | | | | | /----- GSBRNA2T00120243001 [Brassica napus] (117)
| | | | | \-100+
| | | | | \----- XP_013621558.1 [Brassica oleracea] (153)
| | | \-82-+
| | | |--------------- Rsa1.0_00367.1_g00016.1 [Raphanus sativus] (142)
| | | |
| | | \--------------- RrC13304_p1 [Raphanus raphanistrum] (156)
| | |
| | | /----- AA12G00075 [Aethionema arabicum] (21)
| | | |
| | |---------51--------+----- Tp2g22310 [Thellungiella parvula] (26)
| | | |
| | | \----- Thhalv10004250m [Eutrema salsugineum] (130)
| | |
--51-+ | |------------------------- XP_010519640.1 [Tarenaya hassleriana] (72)
| | |
| | \------------------------- KFK27790.1 [Arabis alpina] (98)
| |
| | /---------- Gorai.009G012300.1 [Gossypium raimondii] (16)
| | |
| | | /----- Cotton_A_11503_BGI-A2_v1.0 [Gossypium arboreum] (27)
| | /-100+-97-+
| | | | \----- Gh_A05G0046 [Gossypium hirsutum] (112)
| | | |
| | /-61-+ \---------- Gh_D05G0099 [Gossypium hirsutum] (57)
| | | |
| | | \--------------- Thecc1EG038269t1 [Theobroma cacao] (35)
| | |
| | /-100+ /----- Gh_D06G0457 [Gossypium hirsutum] (17)
| | | | /-95-+
| | | | | \----- Gorai.010G056100.1 [Gossypium raimondii] (67)
| | | \---100---+
| | | | /----- Cotton_A_08380_BGI-A2_v1.0 [Gossypium arboreum] (68)
| | | \-100+
| | /-55-+ \----- Cotton_A_08384_BGI-A2_v1.0 [Gossypium arboreum] (90)
| | | |
| | | |------------------------- evm.model.supercontig_46.88 [Carica papaya] (42)
| | | |
| | /--55-+ | /----- Ciclev10008818m [Citrus clementina] (59)
| | | | \--------100--------+
| | | | \----- orange1.1g019151m [Citrus sinensis] (129)
| |---------55--------+ |
| | | \------------------------------ Eucgr.C00434.1.p [Eucalyptus grandis] (25)
| | |
| | \------------------------------------ Eucgr.C01686.1.p [Eucalyptus grandis] (149)
| |
| \-------------------------------------------------------- XP_010541588.1 [Tarenaya hassleriana] (134)
|
| /------------------------------ evm.model.supercontig_29.29 [Carica papaya] (18)
| |
| | /----- Gh_D08G1910 [Gossypium hirsutum] (32)
| | /-94-+
| | | \----- Gorai.004G206600.1 [Gossypium raimondii] (140)
| | /---100---+
| | | | /----- Gh_A08G1599 [Gossypium hirsutum] (93)
| | | \-100+
| | | \----- Cotton_A_09961_BGI-A2_v1.0 [Gossypium arboreum] (123)
| | |
| /--63-+ | /----- Gh_A03G2005 [Gossypium hirsutum] (33)
| | | /-69-+ /-100+
| | | | | | \----- Cotton_A_28415_BGI-A2_v1.0 [Gossypium arboreum] (147)
| | | | | /-100+
| | | | | | | /----- Gh_D03G1492 [Gossypium hirsutum] (70)
| | | | | | \-88-+
| | | | | | \----- Gorai.003G163800.1 [Gossypium raimondii] (91)
| | | | \-55-+
| | | | | /----- Gh_D12G2227 [Gossypium hirsutum] (56)
| | \-100+ | /-80-+
| | | | | \----- Gorai.008G242800.1 [Gossypium raimondii] (84)
| /-82-+ | \-100+
| | | | | /----- Gh_A12G2049 [Gossypium hirsutum] (78)
| | | | \-97-+
| | | | \----- Cotton_A_14429_BGI-A2_v1.0 [Gossypium arboreum] (155)
| | | |
| | | \------------------------- Thecc1EG016150t1 [Theobroma cacao] (137)
| | |
| | | /----- Ciclev10021319m [Citrus clementina] (71)
\---------83--------+ | /-100+
| | | \----- orange1.1g022056m [Citrus sinensis] (148)
| \------------95-----------+
| | /----- Neem_16680_f_1 [Azadirachta indica] (139)
| \-100+
| \----- Neem_12317_f_1 [Azadirachta indica] (154)
|
\----------------------------------------- Eucgr.D01935.1.p [Eucalyptus grandis] (58)
Root part of tree:
/------------------------------------------------------------------ Thhalv10023617m [Eutrema salsugineum] (1)
|
|------------------------------------------------------------------ 676732352 [Sisymbrium irio] (125)
|
|------------------------------------------------------------------ Tp2g01590 [Thellungiella parvula] (135)
|
| /--------------------------------- RrC476_p4 [Raphanus raphanistrum] (34)
| |
| /-------84------+ /---------------- GSBRNA2T00156648001 [Brassica napus] (66)
| | \-------100------+
| | \---------------- XP_013614592.1 [Brassica oleracea] (143)
| |
| |------------------------------------------------- GSBRNA2T00043816001 [Brassica napus] (47)
|-------78-------+
| | /---------------- GSBRNA2T00054550001 [Brassica napus] (75)
| |---------------53---------------+
| | \---------------- XP_013607027.1 [Brassica oleracea] (158)
| |
| \------------------------------------------------- XP_009112718.1 [Brassica rapa] (119)
|
| /---------------- XP_009113030.1 [Brassica rapa] (7)
+ /-------100------+
| | \---------------- GSBRNA2T00082979001 [Brassica napus] (110)
| /------100------+
| | \--------------------------------- XP_013606756.1 [Brassica oleracea] (124)
|-------61-------+
| | /---------------- RrC4793_p1 [Raphanus raphanistrum] (86)
| \---------------100--------------+
| \---------------- Rsa1.0_00086.1_g00013.1 [Raphanus sativus] (114)
|
| /---------------- (278)
| /-------55-------+
| | \---------------- XP_010533731.1 [Tarenaya hassleriana] (128)
| |
| |--------------------------------- 475053 [Arabidopsis lyrata] (22)
| |
| |--------------------------------- KFK40551.1 [Arabis alpina] (43)
| |
| | /---------------- Carubv10020735m [Capsella rubella] (45)
| |-------96-------+
| | \---------------- Cagra.1670s0003.1.p [Capsella grandiflora] (141)
| |
\---------------51---------------+--------------------------------- AA53G01391 [Aethionema arabicum] (46)
|
|--------------------------------- Csa16g055700.1 [Camelina sativa] (49)
|
|--------------------------------- AT1G62990.1 [Arabidopsis thaliana] (69)
|
|--------------------------------- Csa07g064320.1 [Camelina sativa] (79)
|
|--------------------------------- Csa09g097700.1 [Camelina sativa] (120)
|
\--------------------------------- Bostr.22157s0023.1.p [Boechera stricta] (120)
|
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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